RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 NOMO2Q5JPE7 1267 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 TAF3Q5VWG9 929 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 KIAA1328Q86T90 577 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 GLYCTKQ8IVS8 523 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 TTC39CQ8N584 583 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 SLC30A5Q8TAD4 765 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 VWCEQ96DN2 955 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 RNF216Q9NWF9 866 aaPredicted RBP22.31■■□□□ 1.16
SND1-214ENST00000489417 GDAP2Q9NXN4 497 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 NENFQ9UMX5 172 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 PCDHA13Q9Y5I0 950 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 CASTOR2A6NHX0 329 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 SPTLC1O15269 473 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 CHRNB2P17787 502 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 ITGB8P26012 769 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 CLCNKBP51801 687 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 VAV2P52735 878 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 LILRA4P59901 499 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 CDR2Q01850 454 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 IKBKEQ14164 716 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 ZNF677Q86XU0 584 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 DDX1Q92499 740 aaKnown RBP22.31■■□□□ 1.16
SND1-214ENST00000489417 DDX27Q96GQ7 796 aaKnown RBP22.31■■□□□ 1.16
SND1-214ENST00000489417 UROC1Q96N76 676 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 LUC7LQ9NQ29 371 aaKnown RBP22.31■■□□□ 1.16
SND1-214ENST00000489417 SEPT11Q9NVA2 429 aaKnown RBP22.31■■□□□ 1.16
SND1-214ENST00000489417 KANSL3Q9P2N6 904 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 CACNG4Q9UBN1 327 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 NAGPAQ9UK23 515 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 KIAA0100Q14667 2235 aaKnown RBP22.3■■□□□ 1.16
SND1-214ENST00000489417 HOXA2O43364 376 aa22.3■■□□□ 1.16
SND1-214ENST00000489417 CILPO75339 1184 aa22.3■■□□□ 1.16
SND1-214ENST00000489417 CALCAP01258 141 aa22.3■■□□□ 1.16
SND1-214ENST00000489417 GNA15P30679 374 aa22.3■■□□□ 1.16
SND1-214ENST00000489417 FMO1Q01740 532 aa22.3■■□□□ 1.16
SND1-214ENST00000489417 INCA1Q0VD86 236 aa22.3■■□□□ 1.16
SND1-214ENST00000489417 CCDC122Q5T0U0 273 aa22.3■■□□□ 1.16
SND1-214ENST00000489417 MFSD5Q6N075 450 aa22.3■■□□□ 1.16
SND1-214ENST00000489417 NPAS4Q8IUM7 802 aa22.3■■□□□ 1.16
SND1-214ENST00000489417 TMEM199Q8N511 208 aa22.3■■□□□ 1.16
SND1-214ENST00000489417 SCN1AP35498 2009 aa22.29■■□□□ 1.16
SND1-214ENST00000489417 A0A0U1RQJ8 604 aa22.29■■□□□ 1.16
SND1-214ENST00000489417 MMEP08473 750 aa22.29■■□□□ 1.16
SND1-214ENST00000489417 UPP1Q16831 310 aa22.29■■□□□ 1.16
SND1-214ENST00000489417 ZNF394Q53GI3 561 aa22.29■■□□□ 1.16
SND1-214ENST00000489417 C10orf76Q5T2E6 689 aa22.29■■□□□ 1.16
SND1-214ENST00000489417 ALKBH5Q6P6C2 394 aaKnown RBP22.29■■□□□ 1.16
SND1-214ENST00000489417 ABI1Q8IZP0 508 aa22.29■■□□□ 1.16
SND1-214ENST00000489417 TXLNBQ8N3L3 684 aa22.29■■□□□ 1.16
SND1-214ENST00000489417 WHAMMQ8TF30 809 aa22.29■■□□□ 1.16
SND1-214ENST00000489417 ATRIPQ8WXE1 791 aa22.29■■□□□ 1.16
SND1-214ENST00000489417 BARX2Q9UMQ3 279 aaPredicted RBP22.29■■□□□ 1.16
SND1-214ENST00000489417 TET1Q8NFU7 2136 aa22.28■■□□□ 1.16
SND1-214ENST00000489417 PAEPP09466 180 aa22.28■■□□□ 1.16
SND1-214ENST00000489417 CSF2RAP15509 400 aa22.28■■□□□ 1.16
SND1-214ENST00000489417 RAD23BP54727 409 aa22.28■■□□□ 1.16
SND1-214ENST00000489417 ZNF662Q6ZS27 426 aa22.28■■□□□ 1.16
SND1-214ENST00000489417 CRIPAKQ8N1N5 446 aa22.28■■□□□ 1.16
SND1-214ENST00000489417 PCDHB18PQ96TA0 734 aa22.28■■□□□ 1.16
SND1-214ENST00000489417 MRPL45Q9BRJ2 306 aaKnown RBP22.28■■□□□ 1.16
SND1-214ENST00000489417 PAAF1Q9BRP4 392 aa22.28■■□□□ 1.16
SND1-214ENST00000489417 ELOVL4Q9GZR5 314 aa22.28■■□□□ 1.16
SND1-214ENST00000489417 LZTFL1Q9NQ48 299 aa22.28■■□□□ 1.16
SND1-214ENST00000489417 TBC1D13Q9NVG8 400 aa22.28■■□□□ 1.16
SND1-214ENST00000489417 PUF60Q9UHX1 559 aaKnown RBP22.28■■□□□ 1.16
SND1-214ENST00000489417 TDRD15B5MCY1 1934 aaKnown RBP22.28■■□□□ 1.16
SND1-214ENST00000489417 RCCD1A6NED2 376 aa22.27■■□□□ 1.16
SND1-214ENST00000489417 THAP12O43422 761 aa22.27■■□□□ 1.16
SND1-214ENST00000489417 ARHGAP25P42331 645 aa22.27■■□□□ 1.16
SND1-214ENST00000489417 NDST1P52848 882 aa22.27■■□□□ 1.16
SND1-214ENST00000489417 DSC1Q08554 894 aa22.27■■□□□ 1.16
SND1-214ENST00000489417 SOWAHAQ2M3V2 549 aa22.27■■□□□ 1.16
SND1-214ENST00000489417 ARHGAP29Q52LW3 1261 aa22.27■■□□□ 1.16
SND1-214ENST00000489417 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.27■■□□□ 1.16
SND1-214ENST00000489417 LIMS2Q7Z4I7 341 aa22.27■■□□□ 1.16
SND1-214ENST00000489417 PALB2Q86YC2 1186 aa22.27■■□□□ 1.16
SND1-214ENST00000489417 TOP6BLQ8N6T0 577 aa22.27■■□□□ 1.16
SND1-214ENST00000489417 CASD1Q96PB1 797 aa22.27■■□□□ 1.16
SND1-214ENST00000489417 TWNKQ96RR1 684 aa22.27■■□□□ 1.16
SND1-214ENST00000489417 HMGXB4Q9UGU5 601 aa22.27■■□□□ 1.16
SND1-214ENST00000489417 ATP8B3O60423 1300 aa22.26■■□□□ 1.15
SND1-214ENST00000489417 ABHD14A-ACY1A0A1B0GW23 586 aa22.26■■□□□ 1.15
SND1-214ENST00000489417 HUS1O60921 280 aa22.26■■□□□ 1.15
SND1-214ENST00000489417 TACC1O75410 805 aa22.26■■□□□ 1.15
SND1-214ENST00000489417 DDHD2O94830 711 aa22.26■■□□□ 1.15
SND1-214ENST00000489417 PFKMP08237 780 aa22.26■■□□□ 1.15
SND1-214ENST00000489417 PAX3P23760 479 aa22.26■■□□□ 1.15
SND1-214ENST00000489417 IGFBP6P24592 240 aaPredicted RBP22.26■■□□□ 1.15
SND1-214ENST00000489417 RNASELQ05823 741 aaKnown RBP22.26■■□□□ 1.15
SND1-214ENST00000489417 DPH6Q7L8W6 267 aa22.26■■□□□ 1.15
SND1-214ENST00000489417 ZNF280BQ86YH2 543 aa22.26■■□□□ 1.15
SND1-214ENST00000489417 SLC4A11Q8NBS3 891 aa22.26■■□□□ 1.15
SND1-214ENST00000489417 C3orf58Q8NDZ4 430 aa22.26■■□□□ 1.15
SND1-214ENST00000489417 APPL2Q8NEU8 664 aa22.26■■□□□ 1.15
SND1-214ENST00000489417 RSPH1Q8WYR4 309 aa22.26■■□□□ 1.15
SND1-214ENST00000489417 RABGGTAQ92696 567 aa22.26■■□□□ 1.15
SND1-214ENST00000489417 TMEM176AQ96HP8 235 aa22.26■■□□□ 1.15
SND1-214ENST00000489417 FAM193BQ96PV7 902 aaPredicted RBP22.26■■□□□ 1.15
SND1-214ENST00000489417 TSGA10Q9BZW7 698 aa22.26■■□□□ 1.15
SND1-214ENST00000489417 RRAGDQ9NQL2 400 aaPredicted RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms