RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 EPHB3P54753 998 aa24.46■■□□□ 1.51
PTPN4-211ENST00000488279 EPHA5P54756 1037 aa24.46■■□□□ 1.51
PTPN4-211ENST00000488279 KCNA1Q09470 495 aa24.46■■□□□ 1.51
PTPN4-211ENST00000488279 L1TD1Q5T7N2 865 aaKnown RBP24.46■■□□□ 1.51
PTPN4-211ENST00000488279 CRELD2Q6UXH1 353 aaPredicted RBP24.46■■□□□ 1.51
PTPN4-211ENST00000488279 ASCL5Q7RTU5 278 aa24.46■■□□□ 1.51
PTPN4-211ENST00000488279 IKZF4Q9H2S9 585 aa24.46■■□□□ 1.51
PTPN4-211ENST00000488279 OLFML3Q9NRN5 406 aa24.46■■□□□ 1.51
PTPN4-211ENST00000488279 DSEQ9UL01 958 aa24.46■■□□□ 1.51
PTPN4-211ENST00000488279 PRR23AA6NEV1 266 aa24.45■■□□□ 1.5
PTPN4-211ENST00000488279 IL18RAPO95256 599 aa24.45■■□□□ 1.5
PTPN4-211ENST00000488279 VNN2O95498 520 aa24.45■■□□□ 1.5
PTPN4-211ENST00000488279 NASPP49321 788 aaPredicted RBP24.45■■□□□ 1.5
PTPN4-211ENST00000488279 STK38Q15208 465 aa24.45■■□□□ 1.5
PTPN4-211ENST00000488279 CENPPQ6IPU0 288 aa24.45■■□□□ 1.5
PTPN4-211ENST00000488279 C1orf210Q8IVY1 113 aa24.45■■□□□ 1.5
PTPN4-211ENST00000488279 ZSWIM3Q96MP5 696 aa24.45■■□□□ 1.5
PTPN4-211ENST00000488279 ASB16Q96NS5 453 aa24.45■■□□□ 1.5
PTPN4-211ENST00000488279 SLC27A5Q9Y2P5 690 aa24.45■■□□□ 1.5
PTPN4-211ENST00000488279 CYP11A1P05108 521 aa24.44■■□□□ 1.5
PTPN4-211ENST00000488279 FCARP24071 287 aa24.44■■□□□ 1.5
PTPN4-211ENST00000488279 ALCAMQ13740 583 aa24.44■■□□□ 1.5
PTPN4-211ENST00000488279 UBXN2BQ14CS0 331 aa24.44■■□□□ 1.5
PTPN4-211ENST00000488279 METTL23Q86XA0 190 aa24.44■■□□□ 1.5
PTPN4-211ENST00000488279 NT5DC4Q86YG4 428 aa24.44■■□□□ 1.5
PTPN4-211ENST00000488279 SYCP3Q8IZU3 236 aa24.44■■□□□ 1.5
PTPN4-211ENST00000488279 ATAD1Q8NBU5 361 aa24.44■■□□□ 1.5
PTPN4-211ENST00000488279 SMARCD2Q92925 531 aa24.44■■□□□ 1.5
PTPN4-211ENST00000488279 FAM213AQ9BRX8 229 aa24.44■■□□□ 1.5
PTPN4-211ENST00000488279 OSBPL6Q9BZF3 934 aa24.44■■□□□ 1.5
PTPN4-211ENST00000488279 GPR88Q9GZN0 384 aa24.44■■□□□ 1.5
PTPN4-211ENST00000488279 CRISPLD1Q9H336 500 aa24.44■■□□□ 1.5
PTPN4-211ENST00000488279 PANK4Q9NVE7 773 aa24.44■■□□□ 1.5
PTPN4-211ENST00000488279 A0A087X0B3 334 aa24.43■■□□□ 1.5
PTPN4-211ENST00000488279 FRMD3A2A2Y4 597 aa24.43■■□□□ 1.5
PTPN4-211ENST00000488279 FAM170BA6NMN3 283 aa24.43■■□□□ 1.5
PTPN4-211ENST00000488279 TULP1O00294 542 aaPredicted RBP24.43■■□□□ 1.5
PTPN4-211ENST00000488279 CYB561D2O14569 222 aa24.43■■□□□ 1.5
PTPN4-211ENST00000488279 MOSPD3O75425 235 aa24.43■■□□□ 1.5
PTPN4-211ENST00000488279 GLULP15104 373 aa24.43■■□□□ 1.5
PTPN4-211ENST00000488279 GJA1P17302 382 aa24.43■■□□□ 1.5
PTPN4-211ENST00000488279 TAF6P49848 677 aa24.43■■□□□ 1.5
PTPN4-211ENST00000488279 PDILTQ8N807 584 aa24.43■■□□□ 1.5
PTPN4-211ENST00000488279 LINC00301Q8NCQ3 95 aa24.43■■□□□ 1.5
PTPN4-211ENST00000488279 NELL2Q99435 816 aa24.43■■□□□ 1.5
PTPN4-211ENST00000488279 TRMT61BQ9BVS5 477 aaKnown RBP24.43■■□□□ 1.5
PTPN4-211ENST00000488279 BCO2Q9BYV7 579 aa24.43■■□□□ 1.5
PTPN4-211ENST00000488279 BRD9Q9H8M2 597 aa24.43■■□□□ 1.5
PTPN4-211ENST00000488279 HSFX1Q9UBD0 423 aa24.43■■□□□ 1.5
PTPN4-211ENST00000488279 ASB3Q9Y575 518 aa24.43■■□□□ 1.5
PTPN4-211ENST00000488279 WDR87Q6ZQQ6 2873 aa24.43■■□□□ 1.5
PTPN4-211ENST00000488279 MTMR11A4FU01 709 aa24.42■■□□□ 1.5
PTPN4-211ENST00000488279 NRG2O14511 850 aaPredicted RBP24.42■■□□□ 1.5
PTPN4-211ENST00000488279 LRRN2O75325 713 aa24.42■■□□□ 1.5
PTPN4-211ENST00000488279 LDHAP00338 332 aaKnown RBP24.42■■□□□ 1.5
PTPN4-211ENST00000488279 CASP5P51878 434 aa24.42■■□□□ 1.5
PTPN4-211ENST00000488279 TEAD2Q15562 447 aa24.42■■□□□ 1.5
PTPN4-211ENST00000488279 THEM5Q8N1Q8 247 aa24.42■■□□□ 1.5
PTPN4-211ENST00000488279 ZNF396Q96N95 335 aaPredicted RBP24.42■■□□□ 1.5
PTPN4-211ENST00000488279 TMEM209Q96SK2 561 aa24.42■■□□□ 1.5
PTPN4-211ENST00000488279 PYM1Q9BRP8 204 aaKnown RBP24.42■■□□□ 1.5
PTPN4-211ENST00000488279 LRRC27Q9C0I9 530 aa24.42■■□□□ 1.5
PTPN4-211ENST00000488279 SLITRK6Q9H5Y7 841 aa24.42■■□□□ 1.5
PTPN4-211ENST00000488279 MTF2Q9Y483 593 aaPredicted RBP24.42■■□□□ 1.5
PTPN4-211ENST00000488279 MYH15Q9Y2K3 1946 aa24.41■■□□□ 1.5
PTPN4-211ENST00000488279 SPTLC2O15270 562 aa24.41■■□□□ 1.5
PTPN4-211ENST00000488279 CD72P21854 359 aa24.41■■□□□ 1.5
PTPN4-211ENST00000488279 GARTP22102 1010 aa24.41■■□□□ 1.5
PTPN4-211ENST00000488279 TUFMP49411 452 aaKnown RBP24.41■■□□□ 1.5
PTPN4-211ENST00000488279 GRM2Q14416 872 aa24.41■■□□□ 1.5
PTPN4-211ENST00000488279 ZNF852Q6ZMS4 543 aa24.41■■□□□ 1.5
PTPN4-211ENST00000488279 TPRG1Q6ZUI0 275 aa24.41■■□□□ 1.5
PTPN4-211ENST00000488279 DNAJB7Q7Z6W7 309 aaPredicted RBP24.41■■□□□ 1.5
PTPN4-211ENST00000488279 CCDC65Q8IXS2 484 aa24.41■■□□□ 1.5
PTPN4-211ENST00000488279 EFCAB13Q8IY85 973 aa24.41■■□□□ 1.5
PTPN4-211ENST00000488279 OR10T2Q8NGX3 314 aa24.41■■□□□ 1.5
PTPN4-211ENST00000488279 SHKBP1Q8TBC3 707 aa24.41■■□□□ 1.5
PTPN4-211ENST00000488279 ZSCAN18Q8TBC5 510 aaPredicted RBP24.41■■□□□ 1.5
PTPN4-211ENST00000488279 DNASE1L2Q92874 299 aa24.41■■□□□ 1.5
PTPN4-211ENST00000488279 SNX21Q969T3 373 aa24.41■■□□□ 1.5
PTPN4-211ENST00000488279 LRRC3Q9BY71 257 aa24.41■■□□□ 1.5
PTPN4-211ENST00000488279 DNAJC25Q9H1X3 360 aa24.41■■□□□ 1.5
PTPN4-211ENST00000488279 TMEM206Q9H813 350 aa24.41■■□□□ 1.5
PTPN4-211ENST00000488279 TRPV4Q9HBA0 871 aa24.41■■□□□ 1.5
PTPN4-211ENST00000488279 LTB4R2Q9NPC1 389 aa24.41■■□□□ 1.5
PTPN4-211ENST00000488279 HEBP1Q9NRV9 189 aa24.41■■□□□ 1.5
PTPN4-211ENST00000488279 TFIP11Q9UBB9 837 aaKnown RBP24.41■■□□□ 1.5
PTPN4-211ENST00000488279 KPNA7A9QM74 516 aa24.4■■□□□ 1.5
PTPN4-211ENST00000488279 PPP6R2O75170 966 aa24.4■■□□□ 1.5
PTPN4-211ENST00000488279 PSMC3P17980 439 aa24.4■■□□□ 1.5
PTPN4-211ENST00000488279 VIPR2P41587 438 aa24.4■■□□□ 1.5
PTPN4-211ENST00000488279 TFAMQ00059 246 aaKnown RBP24.4■■□□□ 1.5
PTPN4-211ENST00000488279 SV2CQ496J9 727 aa24.4■■□□□ 1.5
PTPN4-211ENST00000488279 SLC39A12Q504Y0 691 aa24.4■■□□□ 1.5
PTPN4-211ENST00000488279 ITIH5Q86UX2 942 aa24.4■■□□□ 1.5
PTPN4-211ENST00000488279 CACTINQ8WUQ7 758 aaKnown RBP24.4■■□□□ 1.5
PTPN4-211ENST00000488279 IRF7Q92985 503 aa24.4■■□□□ 1.5
PTPN4-211ENST00000488279 E2F7Q96AV8 911 aa24.4■■□□□ 1.5
PTPN4-211ENST00000488279 SAAL1Q96ER3 474 aa24.4■■□□□ 1.5
PTPN4-211ENST00000488279 BORCS6Q96GS4 357 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms