RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 PIK3R5Q8WYR1 880 aa16.91■□□□□ 0.3
C9orf3-219ENST00000488186 NXF1Q9UBU9 619 aaKnown RBP16.91■□□□□ 0.3
C9orf3-219ENST00000488186 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.9■□□□□ 0.3
C9orf3-219ENST00000488186 SMTNL1A8MU46 457 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 BECN2A8MW95 431 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 PES1O00541 588 aaKnown RBP16.9■□□□□ 0.3
C9orf3-219ENST00000488186 N4BP1O75113 896 aaKnown RBP16.9■□□□□ 0.3
C9orf3-219ENST00000488186 HLA-DRAP01903 254 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 TPM2P07951 284 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 CNPP09543 421 aaKnown RBP16.9■□□□□ 0.3
C9orf3-219ENST00000488186 SRGAP2BP0DMP2 458 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 TYMPP19971 482 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 CDK11BP21127 795 aaKnown RBP16.9■□□□□ 0.3
C9orf3-219ENST00000488186 MARSP56192 900 aaKnown RBP16.9■□□□□ 0.3
C9orf3-219ENST00000488186 ARPP19P56211 112 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 WDR72Q3MJ13 1102 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 CTXN3Q4LDR2 81 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 ZNF667Q5HYK9 610 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 OVOS1Q6IE37 1185 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 ZNF280DQ6N043 979 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 ADGRD2Q7Z7M1 963 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 GLYCTKQ8IVS8 523 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 FBXL13Q8NEE6 735 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 ANKRD20A12PQ8NF67 263 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 CXorf38Q8TB03 319 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 TAF4BQ92750 862 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 KLHL5Q96PQ7 755 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 MED15Q96RN5 788 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 FNIP2Q9P278 1114 aa16.9■□□□□ 0.3
C9orf3-219ENST00000488186 SPDYE4A6NLX3 237 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 TEX28O15482 410 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 LILRB3O75022 631 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 C1RP00736 705 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 AFPP02771 609 aaKnown RBP16.89■□□□□ 0.29
C9orf3-219ENST00000488186 RPL17P18621 184 aaKnown RBP16.89■□□□□ 0.29
C9orf3-219ENST00000488186 NDUFV1P49821 464 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 ZNF165P49910 485 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 MYL7Q01449 175 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 KCNH2Q12809 1159 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 DUSP6Q16828 381 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 CTC1Q2NKJ3 1217 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 SCARA3Q6AZY7 606 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 LLGL2Q6P1M3 1020 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 ELMSAN1Q6PJG2 1045 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 C15orf39Q6ZRI6 1047 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 TRIM59Q8IWR1 403 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 TMEM86AQ8N2M4 240 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 TOP6BLQ8N6T0 577 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 TAS1R2Q8TE23 839 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 ATXN2LQ8WWM7 1075 aaKnown RBP16.89■□□□□ 0.29
C9orf3-219ENST00000488186 SLC35C1Q96A29 364 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 OXCT2Q9BYC2 517 aaPredicted RBP16.89■□□□□ 0.29
C9orf3-219ENST00000488186 RXFP1Q9HBX9 757 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.89■□□□□ 0.29
C9orf3-219ENST00000488186 SAMSN1Q9NSI8 373 aaKnown RBP16.89■□□□□ 0.29
C9orf3-219ENST00000488186 GDAP2Q9NXN4 497 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 BACE2Q9Y5Z0 518 aa16.89■□□□□ 0.29
C9orf3-219ENST00000488186 UNC80Q8N2C7 3258 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 NCOR1O75376 2440 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 KCNJ18B7U540 433 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 CLASP2O75122 1294 aaKnown RBP16.88■□□□□ 0.29
C9orf3-219ENST00000488186 VNN1O95497 513 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 STAU1O95793 577 aaKnown RBP16.88■□□□□ 0.29
C9orf3-219ENST00000488186 CAVIN2O95810 425 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 PRKCSHP14314 528 aaPredicted RBP16.88■□□□□ 0.29
C9orf3-219ENST00000488186 OR1D2P34982 312 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 FMO5P49326 533 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 MCCD1P59942 119 aaPredicted RBP16.88■□□□□ 0.29
C9orf3-219ENST00000488186 TPM4P67936 248 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 HYAL1Q12794 435 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 KCNJ12Q14500 433 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 WSCD1Q658N2 575 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 DPH6Q7L8W6 267 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 PALB2Q86YC2 1186 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 AOPEPQ8N6M6 819 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 PABPC5Q96DU9 382 aaKnown RBP16.88■□□□□ 0.29
C9orf3-219ENST00000488186 SNX25Q9H3E2 840 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 FANCLQ9NW38 375 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 RAB20Q9NX57 234 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 CLDND1Q9NY35 253 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 MTRRQ9UBK8 725 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 DPP7Q9UHL4 492 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 CDY1Q9Y6F8 540 aa16.88■□□□□ 0.29
C9orf3-219ENST00000488186 SPTBN5Q9NRC6 3674 aaKnown RBP16.88■□□□□ 0.29
C9orf3-219ENST00000488186 OR6C75A6NL08 312 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 OAZ2O95190 189 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 GLUD1P00367 558 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 CYP11A1P05108 521 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 EEF1GP26641 437 aaKnown RBP16.87■□□□□ 0.29
C9orf3-219ENST00000488186 LHX1P48742 406 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 AAK1Q2M2I8 961 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 CBWD6Q4V339 395 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 TCP11X2Q5H9J9 407 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 CBWD3Q5JTY5 395 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 CBWD5Q5RIA9 395 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 TMEM184AQ6ZMB5 413 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 IRF2BP1Q8IU81 584 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 ADGRF2Q8IZF7 708 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 PDCL2Q8N4E4 241 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 EFHBQ8N7U6 833 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms