RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 GPR35Q9HC97 309 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 TPCN1Q9ULQ1 816 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 MAP3K2Q9Y2U5 619 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 PCDHGB6Q9Y5F9 930 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 NOX1Q9Y5S8 564 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 C1QTNF3-AMACRE9PGA6 284 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 POLRMTO00411 1230 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 VPS4BO75351 444 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 CFIP05156 583 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 MYL1P05976 194 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 INSRRP14616 1297 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 NPR1P16066 1061 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 LAG3P18627 525 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 DGCR2P98153 550 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 SLC25A3Q00325 362 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 KRTAP1-1Q07627 177 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 FOXE3Q13461 319 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 TUBA3CQ13748 450 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 TUBA3EQ6PEY2 450 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 APOA5Q6Q788 366 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 CFAP52Q8N1V2 620 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 OR6B3Q8NGW1 331 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 CACTINQ8WUQ7 758 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 DDX17Q92841 729 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 MRGPRX1Q96LB2 322 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 MED15Q96RN5 788 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 CNPPD1Q9BV87 410 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 SARGQ9BW04 601 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 ZNF341Q9BYN7 854 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 LRRC27Q9C0I9 530 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 NRDE2Q9H7Z3 1164 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 ATP6V0A4Q9HBG4 840 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 HSFX1Q9UBD0 423 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 SRRDQ9UH36 339 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 AGAP1Q9UPQ3 857 aa4.8□□□□□ -1.64
ECHDC1-217ENST00000488087 CCDC195A0A1B0GUA6 201 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 CCDC78A2IDD5 438 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 E9PLN8 166 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 TOR1BO14657 336 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 PLIN1O60240 522 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 TBC1D4O60343 1298 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 UNC5CO95185 931 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 KIF20AO95235 890 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 MAP4K4O95819 1239 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 ELANEP08246 267 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 NBPF7P0C2Y1 421 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 BRAFP15056 766 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 DDX6P26196 483 aaKnown RBP eCLIP4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 PTGS2P35354 604 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 PURAQ00577 322 aaKnown RBP4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 RESTQ13127 1097 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 SEMA5AQ13591 1074 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 POLD3Q15054 466 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 SAFBQ15424 915 aaKnown RBP eCLIP4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 LSM12Q3MHD2 195 aaKnown RBP4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 PREPLQ4J6C6 727 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 TAPT1Q6NXT6 567 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 SLC30A10Q6XR72 485 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 ZNF783Q6ZMS7 281 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 CCDC146Q8IYE0 955 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 FAM43AQ8N2R8 423 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 TMEM132CQ8N3T6 1108 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 CPEB3Q8NE35 698 aaKnown RBP4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 FAM46DQ8NEK8 389 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 TRIB1Q96RU8 372 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 VKORC1Q9BQB6 163 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 APOL5Q9BWW9 433 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 VPS11Q9H270 941 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 DDX21Q9NR30 783 aaKnown RBP eCLIP4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 SLC2A4RGQ9NR83 387 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 KCNE5Q9UJ90 142 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 OGDHLQ9ULD0 1010 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 MED16Q9Y2X0 877 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 CCDC180Q9P1Z9 1646 aa4.79□□□□□ -1.64
ECHDC1-217ENST00000488087 USP19O94966 1318 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 CCDC194A0A1B0GVG4 234 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 UNC119BA6NIH7 251 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 MYO1CO00159 1063 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 PQBP1O60828 265 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 PPFIA4O75335 1185 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 CDKL5O76039 1030 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 PEX11BO96011 259 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 GRPP07492 148 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 TRIM27P14373 513 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 ZKSCAN1P17029 563 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 CHRM3P20309 590 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 NR4A1P22736 598 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 CXADRP78310 365 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 BEAN1Q3B7T3 259 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 AMOTQ4VCS5 1084 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 MIIPQ5JXC2 388 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 B3GNTL1Q67FW5 361 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 CYB5RLQ6IPT4 315 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 LRRC55Q6ZSA7 311 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 MPP5Q8N3R9 675 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 KBTBD7Q8WVZ9 684 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 ANKS1AQ92625 1134 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 HAS1Q92839 578 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 MYEOVQ96EZ4 313 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms