RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 DNAJC7Q99615 494 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 GDF15Q99988 308 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 PI4K2AQ9BTU6 479 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 NRDE2Q9H7Z3 1164 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 RC3H2Q9HBD1 1191 aaKnown RBP11.82□□□□□ -0.52
HDLBP-242ENST00000488013 APOBEC3GQ9HC16 384 aaKnown RBP11.82□□□□□ -0.52
HDLBP-242ENST00000488013 AIPL1Q9NZN9 384 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 BARX2Q9UMQ3 279 aaPredicted RBP11.82□□□□□ -0.52
HDLBP-242ENST00000488013 PCDHB12Q9Y5F1 795 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 F8VZ95 297 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 M0QZQ0 153 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 CYB561D2O14569 222 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 NRP1O14786 923 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 DDHD2O94830 711 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 GALTP07902 379 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 PCSK1P29120 753 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 SOX5P35711 763 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 KLK7P49862 253 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 BCAR1P56945 870 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 JAM2P57087 298 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 KRT17Q04695 432 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 PTK2Q05397 1052 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 INCA1Q0VD86 236 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 LIMS2Q7Z4I7 341 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 FAM71AQ8IYT1 594 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 CPLX3Q8WVH0 158 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 BAP1Q92560 729 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 TATDN2Q93075 761 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 TNIP3Q96KP6 325 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 SUSD3Q96L08 255 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 SENP8Q96LD8 212 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 SAMD11Q96NU1 681 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 PLVAPQ9BX97 442 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 CXCL16Q9H2A7 254 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 SNX25Q9H3E2 840 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 GOLGA2P5Q9HBQ8 144 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 NLRC4Q9NPP4 1024 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 CXXC1Q9P0U4 656 aaPredicted RBP11.81□□□□□ -0.52
HDLBP-242ENST00000488013 ADAM28Q9UKQ2 775 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 CNTN6Q9UQ52 1028 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 FHOD1Q9Y613 1164 aa11.81□□□□□ -0.52
HDLBP-242ENST00000488013 TANC1Q9C0D5 1861 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 MKI67P46013 3256 aaKnown RBP11.8□□□□□ -0.52
HDLBP-242ENST00000488013 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.8□□□□□ -0.52
HDLBP-242ENST00000488013 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.8□□□□□ -0.52
HDLBP-242ENST00000488013 GFPT2O94808 682 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 CYP11A1P05108 521 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 PAEPP09466 180 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 KRT5P13647 590 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 WARSP23381 471 aaKnown RBP11.8□□□□□ -0.52
HDLBP-242ENST00000488013 FXR1P51114 621 aaKnown RBP eCLIP11.8□□□□□ -0.528e-6■■■□□ 16.4
HDLBP-242ENST00000488013 STILQ15468 1287 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 RAB30Q15771 203 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 ASIC2Q16515 512 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 HS1BP3Q53T59 392 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 SPOPLQ6IQ16 392 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 PPP1R2P3Q6NXS1 205 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 FAM117BQ6P1L5 589 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 KCNT2Q6UVM3 1135 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 CCDC186Q7Z3E2 898 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 ZNF677Q86XU0 584 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 TMTC1Q8IUR5 882 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 ARHGEF19Q8IW93 802 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 THEM5Q8N1Q8 247 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 CLP1Q92989 425 aaKnown RBP11.8□□□□□ -0.52
HDLBP-242ENST00000488013 TMEM169Q96HH4 297 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 NT5C1AQ9BXI3 368 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 CISHQ9NSE2 258 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 ABHD10Q9NUJ1 306 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 SPG21Q9NZD8 308 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 PUF60Q9UHX1 559 aaKnown RBP11.8□□□□□ -0.52
HDLBP-242ENST00000488013 SSX2IPQ9Y2D8 614 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 PCDHB4Q9Y5E5 795 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 PCDHA11Q9Y5I1 949 aa11.8□□□□□ -0.52
HDLBP-242ENST00000488013 LRRC53A6NM62 1247 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 H0YGN5 161 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 H7C4K7 107 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 FOXN3O00409 490 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-242ENST00000488013 EPHB6O15197 1021 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 MED7O43513 233 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 CILPO75339 1184 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 SERPING1P05155 500 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 RB1P06400 928 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 WEE2P0C1S8 567 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 GNL1P36915 607 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-242ENST00000488013 USP8P40818 1118 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 PRKCIP41743 596 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 SLC11A1P49279 550 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 GATMP50440 423 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 SHHQ15465 462 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 MAPRE1Q15691 268 aaKnown RBP11.79□□□□□ -0.52
HDLBP-242ENST00000488013 MEA1Q16626 185 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 ARHGAP44Q17R89 818 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 SOWAHAQ2M3V2 549 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 PAN2Q504Q3 1202 aaKnown RBP11.79□□□□□ -0.52
HDLBP-242ENST00000488013 TIGD5Q53EQ6 642 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 TMEM270Q6UE05 265 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 CYP26C1Q6V0L0 522 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-242ENST00000488013 CCDC170Q8IYT3 715 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms