RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 DEFB123Q8N688 67 aa14.3□□□□□ -0.12
COL4A6-207ENST00000487645 TOP6BLQ8N6T0 577 aa14.3□□□□□ -0.12
COL4A6-207ENST00000487645 MRPL43Q8N983 215 aaKnown RBP14.3□□□□□ -0.12
COL4A6-207ENST00000487645 SPATA18Q8TC71 538 aa14.3□□□□□ -0.12
COL4A6-207ENST00000487645 SEMA4DQ92854 862 aa14.3□□□□□ -0.12
COL4A6-207ENST00000487645 TCF25Q9BQ70 676 aa14.3□□□□□ -0.12
COL4A6-207ENST00000487645 OXCT2Q9BYC2 517 aaPredicted RBP14.3□□□□□ -0.12
COL4A6-207ENST00000487645 H7C4K7 107 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 I3L4J1 428 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 OAZ2O95190 189 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 URODP06132 367 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 P4HA1P13674 534 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 TKTP29401 623 aaKnown RBP14.29□□□□□ -0.12
COL4A6-207ENST00000487645 TNNC1P63316 161 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 CREMQ03060 361 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 ZNF667Q5HYK9 610 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 ANKS3Q6ZW76 656 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 METTL23Q86XA0 190 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 CEP57Q86XR8 500 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 TMEM86AQ8N2M4 240 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 EHBP1Q8NDI1 1231 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 LMO3Q8TAP4 145 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 MICAL1Q8TDZ2 1067 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 PIK3R5Q8WYR1 880 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 FAM161BQ96MY7 647 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 GAS2L1Q99501 681 aaPredicted RBP14.29□□□□□ -0.12
COL4A6-207ENST00000487645 ENTPD7Q9NQZ7 604 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.29□□□□□ -0.12
COL4A6-207ENST00000487645 MTMR10Q9NXD2 777 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 FNIP2Q9P278 1114 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 SNX9Q9Y5X1 595 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 SZT2Q5T011 3432 aa14.29□□□□□ -0.12
COL4A6-207ENST00000487645 PRRC2BQ5JSZ5 2229 aaKnown RBP14.29□□□□□ -0.12
COL4A6-207ENST00000487645 REV3LO60673 3130 aa14.28□□□□□ -0.12
COL4A6-207ENST00000487645 TSC2P49815 1807 aa14.28□□□□□ -0.12
COL4A6-207ENST00000487645 COPB1P53618 953 aaKnown RBP14.28□□□□□ -0.12
COL4A6-207ENST00000487645 YWHAHQ04917 246 aaPredicted RBP14.28□□□□□ -0.12
COL4A6-207ENST00000487645 SOWAHAQ2M3V2 549 aa14.28□□□□□ -0.12
COL4A6-207ENST00000487645 RTP2Q5QGT7 225 aa14.28□□□□□ -0.12
COL4A6-207ENST00000487645 VARS2Q5ST30 1063 aaKnown RBP14.28□□□□□ -0.12
COL4A6-207ENST00000487645 GBP6Q6ZN66 633 aa14.28□□□□□ -0.12
COL4A6-207ENST00000487645 Q7L0L9 218 aa14.28□□□□□ -0.12
COL4A6-207ENST00000487645 APTXQ7Z2E3 356 aaKnown RBP14.28□□□□□ -0.12
COL4A6-207ENST00000487645 LNX1Q8TBB1 728 aaPredicted RBP14.28□□□□□ -0.12
COL4A6-207ENST00000487645 RIN2Q8WYP3 895 aaPredicted RBP14.28□□□□□ -0.12
COL4A6-207ENST00000487645 MMS19Q96T76 1030 aa14.28□□□□□ -0.12
COL4A6-207ENST00000487645 PI4K2AQ9BTU6 479 aa14.28□□□□□ -0.12
COL4A6-207ENST00000487645 VPS16Q9H269 839 aa14.28□□□□□ -0.12
COL4A6-207ENST00000487645 FAM124BQ9H5Z6 455 aaPredicted RBP14.28□□□□□ -0.12
COL4A6-207ENST00000487645 RXFP1Q9HBX9 757 aa14.28□□□□□ -0.12
COL4A6-207ENST00000487645 TAB2Q9NYJ8 693 aa14.28□□□□□ -0.12
COL4A6-207ENST00000487645 NXF1Q9UBU9 619 aaKnown RBP14.28□□□□□ -0.12
COL4A6-207ENST00000487645 BACE2Q9Y5Z0 518 aa14.28□□□□□ -0.12
COL4A6-207ENST00000487645 C2orf71A6NGG8 1288 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 TBC1D4O60343 1298 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 TACC1O75410 805 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 C1RP00736 705 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 ATP1A3P13637 1013 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 IRS1P35568 1242 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 LHX1P48742 406 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 NOP14P78316 857 aaKnown RBP14.27□□□□□ -0.13
COL4A6-207ENST00000487645 ADGRE1Q14246 886 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 PTPN14Q15678 1187 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 PLPP4Q5VZY2 271 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 WSCD1Q658N2 575 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 OVOS1Q6IE37 1185 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 THEM5Q8N1Q8 247 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 PDCL2Q8N4E4 241 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 PPP2R3CQ969Q6 453 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 B3GALT6Q96L58 329 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 CDX2Q99626 313 aaPredicted RBP14.27□□□□□ -0.13
COL4A6-207ENST00000487645 EMILIN2Q9BXX0 1053 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 BCO2Q9BYV7 579 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 CYP3A43Q9HB55 503 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 APOBEC3GQ9HC16 384 aaKnown RBP14.27□□□□□ -0.13
COL4A6-207ENST00000487645 MTRRQ9UBK8 725 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 L1RE1Q9UN81 338 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 TIMM13Q9Y5L4 95 aaPredicted RBP14.27□□□□□ -0.13
COL4A6-207ENST00000487645 MTCH2Q9Y6C9 303 aa14.27□□□□□ -0.13
COL4A6-207ENST00000487645 CDH23Q9H251 3354 aa14.26□□□□□ -0.13
COL4A6-207ENST00000487645 OR6C75A6NL08 312 aa14.26□□□□□ -0.13
COL4A6-207ENST00000487645 HIDE1A8MVS5 230 aa14.26□□□□□ -0.13
COL4A6-207ENST00000487645 PES1O00541 588 aaKnown RBP14.26□□□□□ -0.13
COL4A6-207ENST00000487645 C2CD2LO14523 706 aa14.26□□□□□ -0.13
COL4A6-207ENST00000487645 GABRDO14764 452 aa14.26□□□□□ -0.13
COL4A6-207ENST00000487645 LRRN2O75325 713 aa14.26□□□□□ -0.13
COL4A6-207ENST00000487645 WARSP23381 471 aaKnown RBP14.26□□□□□ -0.13
COL4A6-207ENST00000487645 PSMD5Q16401 504 aa14.26□□□□□ -0.13
COL4A6-207ENST00000487645 EXOC3L4Q17RC7 722 aa14.26□□□□□ -0.13
COL4A6-207ENST00000487645 FILIP1LQ4L180 1135 aa14.26□□□□□ -0.13
COL4A6-207ENST00000487645 FKBP15Q5T1M5 1219 aa14.26□□□□□ -0.13
COL4A6-207ENST00000487645 SPOPLQ6IQ16 392 aa14.26□□□□□ -0.13
COL4A6-207ENST00000487645 PRSS55Q6UWB4 352 aaPredicted RBP14.26□□□□□ -0.13
COL4A6-207ENST00000487645 TTC39CQ8N584 583 aa14.26□□□□□ -0.13
COL4A6-207ENST00000487645 AUTS2Q8WXX7 1259 aa14.26□□□□□ -0.13
COL4A6-207ENST00000487645 TATDN2Q93075 761 aa14.26□□□□□ -0.13
COL4A6-207ENST00000487645 FAM81BQ96LP2 452 aa14.26□□□□□ -0.13
COL4A6-207ENST00000487645 NT5C1BQ96P26 610 aa14.26□□□□□ -0.13
COL4A6-207ENST00000487645 CDCA3Q99618 268 aaPredicted RBP14.26□□□□□ -0.13
COL4A6-207ENST00000487645 CLSTN3Q9BQT9 956 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms