RNA–Protein interactions for RNA: ENST00000487620.1

ZNF3-215, Transcript of zinc finger protein 3, human

TSL 2

Gene ZNF3, Length 2,660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-215	ENST00000487620	GTF2H1	P32780	548 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	CETN2	P41208	172 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	PIK3CA	P42336	1068 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	CCNH	P51946	323 aa	Predicted RBP	10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	FKBP1A	P62942	108 aa	Known RBP	10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	NOP14	P78316	857 aa	Known RBP	10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	PLCB3	Q01970	1234 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	LMNB2	Q03252	620 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	TAF1B	Q53T94	588 aa	Predicted RBP	10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	BRDT	Q58F21	947 aa	Predicted RBP	10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	NAIF1	Q69YI7	327 aa	Predicted RBP	10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	CEP128	Q6ZU80	1094 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	ANO5	Q75V66	913 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	ZNF677	Q86XU0	584 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	ANKMY2	Q8IV38	441 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	ZNF516	Q92618	1163 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	ACSF2	Q96CM8	615 aa	Predicted RBP	10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	TTC25	Q96NG3	672 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	FNBP1	Q96RU3	617 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	NPHS2	Q9NP85	383 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	UBIAD1	Q9Y5Z9	338 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	PEX11A	O75192	247 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	LUC7L3	O95232	432 aa	Known RBP	10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	CCNE2	O96020	404 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	T-ENOL	P0DO92	83 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	CHRM1	P11229	460 aa	Predicted RBP	10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	KRT4	P19013	534 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	CAP2	P40123	477 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	ABL2	P42684	1182 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	BPIFB4	P59827	614 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	PDIA2	Q13087	525 aa	Known RBP	10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	LVRN	Q6Q4G3	990 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	CDAN1	Q8IWY9	1227 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	OGFOD1	Q8N543	542 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	STK32A	Q8WU08	396 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	CEP170P1	Q96L14	293 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	FBXL18	Q96ME1	805 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	CYP39A1	Q9NYL5	469 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	SMG5	Q9UPR3	1016 aa	Known RBP	10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	PCDHB4	Q9Y5E5	795 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	ZNF536	O15090	1300 aa		10.34	□□□□□ -0.75
ZNF3-215	ENST00000487620	WDR64	B1ANS9	1081 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	ENTPD5	O75356	428 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	UPP2	O95045	317 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	HLA-DRA	P01903	254 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	KRT1	P04264	644 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	GNAZ	P19086	355 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	CCNG1	P51959	295 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	RPL7A	P62424	266 aa	Known RBP	10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	NOMO3	P69849	1222 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	BLMH	Q13867	455 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	MFSD7	Q6UXD7	560 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	NIPA1	Q7RTP0	329 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	OTOA	Q7RTW8	1153 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	TTC8	Q8TAM2	541 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	C10orf82	Q8WW14	230 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	INPP5D	Q92835	1189 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	TAAR1	Q96RJ0	339 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	OSBPL1A	Q9BXW6	950 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	MAK16	Q9BXY0	300 aa	Known RBP	10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	FOXP3	Q9BZS1	431 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	ZFP69B	Q9UJL9	534 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	WDR81	Q562E7	1941 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	SGK1	O00141	431 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	ZC3H11A	O75152	810 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	TPBGL	P0DKB5	382 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	FGFR1	P11362	822 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	PCK1	P35558	622 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	ACOT2	P49753	483 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	RASSF2	P50749	326 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	SP4	Q02446	784 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	MTM1	Q13496	603 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	SEPT7	Q16181	437 aa	Known RBP	10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	EAPP	Q56P03	285 aa	Predicted RBP	10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	SLC27A3	Q5K4L6	730 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	MTDH	Q86UE4	582 aa	Known RBP	10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	CCDC125	Q86Z20	511 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	TAB3	Q8N5C8	712 aa	Predicted RBP	10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	CLEC4D	Q8WXI8	215 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	GJD4	Q96KN9	370 aa	Predicted RBP	10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	SENP7	Q9BQF6	1050 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	TMEM121	Q9BTD3	319 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	RAVER2	Q9HCJ3	691 aa	Known RBP	10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	DCTN4	Q9UJW0	460 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	SCIN	Q9Y6U3	715 aa		10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	ZNF646	O15015	1829 aa	Predicted RBP	10.33	□□□□□ -0.76
ZNF3-215	ENST00000487620	ATP2A1	O14983	1001 aa		10.32	□□□□□ -0.76
ZNF3-215	ENST00000487620	TJP3	O95049	919 aa		10.32	□□□□□ -0.76
ZNF3-215	ENST00000487620	PDHA1	P08559	390 aa		10.32	□□□□□ -0.76
ZNF3-215	ENST00000487620	MMP10	P09238	476 aa		10.32	□□□□□ -0.76
ZNF3-215	ENST00000487620	JAK3	P52333	1124 aa		10.32	□□□□□ -0.76
ZNF3-215	ENST00000487620	WNT7B	P56706	349 aa		10.32	□□□□□ -0.76
ZNF3-215	ENST00000487620	OVGP1	Q12889	678 aa		10.32	□□□□□ -0.76
ZNF3-215	ENST00000487620	EFTUD2	Q15029	972 aa	Known RBP eCLIP	10.32	□□□□□ -0.76	1e-7	■□□□□ 10.6
ZNF3-215	ENST00000487620	FYB2	Q5VWT5	728 aa		10.32	□□□□□ -0.76
ZNF3-215	ENST00000487620	TDRD10	Q5VZ19	366 aa	Known RBP	10.32	□□□□□ -0.76
ZNF3-215	ENST00000487620	CENPU	Q71F23	418 aa		10.32	□□□□□ -0.76
ZNF3-215	ENST00000487620	NLRP9	Q7RTR0	991 aa		10.32	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms