RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 ARMCX5Q6P1M9 558 aa8.35□□□□□ -1.07
GARNL3-218ENST00000487565 FOXR2Q6PJQ5 311 aa8.35□□□□□ -1.07
GARNL3-218ENST00000487565 ZPBP2Q6X784 338 aa8.35□□□□□ -1.07
GARNL3-218ENST00000487565 APBB1IPQ7Z5R6 666 aaPredicted RBP8.35□□□□□ -1.07
GARNL3-218ENST00000487565 UBE2Q1Q7Z7E8 422 aa8.35□□□□□ -1.07
GARNL3-218ENST00000487565 CSGALNACT2Q8N6G5 542 aa8.35□□□□□ -1.07
GARNL3-218ENST00000487565 RNF214Q8ND24 703 aa8.35□□□□□ -1.07
GARNL3-218ENST00000487565 TMEM40Q8WWA1 233 aa8.35□□□□□ -1.07
GARNL3-218ENST00000487565 KCTD10Q9H3F6 313 aa8.35□□□□□ -1.07
GARNL3-218ENST00000487565 FZD8Q9H461 694 aa8.35□□□□□ -1.07
GARNL3-218ENST00000487565 CBX8Q9HC52 389 aa8.35□□□□□ -1.07
GARNL3-218ENST00000487565 PRDM5Q9NQX1 630 aaPredicted RBP8.35□□□□□ -1.07
GARNL3-218ENST00000487565 TMEM39AQ9NV64 488 aa8.35□□□□□ -1.07
GARNL3-218ENST00000487565 KCNK4Q9NYG8 393 aa8.35□□□□□ -1.07
GARNL3-218ENST00000487565 TBX21Q9UL17 535 aa8.35□□□□□ -1.07
GARNL3-218ENST00000487565 PIN4Q9Y237 131 aaKnown RBP8.35□□□□□ -1.07
GARNL3-218ENST00000487565 CCDC85CA6NKD9 419 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 SMTNL1A8MU46 457 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 TISP43B9A030 160 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 IKBKBO14920 756 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 N4BP3O15049 544 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 CSDE1O75534 798 aaKnown RBP8.34□□□□□ -1.07
GARNL3-218ENST00000487565 TOM1L1O75674 476 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 WISP1O95388 367 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 FGFR1OPO95684 399 aaKnown RBP8.34□□□□□ -1.07
GARNL3-218ENST00000487565 CHRNA1P02708 482 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 EDN1P05305 212 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 FGFR4P22455 802 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 NR2F2P24468 414 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 RPL13P26373 211 aaKnown RBP8.34□□□□□ -1.07
GARNL3-218ENST00000487565 HOXD13P35453 343 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 PMS1P54277 932 aaKnown RBP8.34□□□□□ -1.07
GARNL3-218ENST00000487565 FAAP100Q0VG06 881 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 LPIN1Q14693 890 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 NOLC1Q14978 699 aaKnown RBP eCLIP8.34□□□□□ -1.07
GARNL3-218ENST00000487565 DCAF4L1Q3SXM0 396 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 FBXO47Q5MNV8 452 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 SPATA1Q5VX52 437 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 ANKRD40Q6AI12 368 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 CENPPQ6IPU0 288 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 NOTUMQ6P988 496 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 MPZL3Q6UWV2 235 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 TSHZ1Q6ZSZ6 1077 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 ACAD11Q709F0 780 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.34□□□□□ -1.07
GARNL3-218ENST00000487565 FAM228AQ86W67 206 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 FAM114A1Q8IWE2 563 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 TMEM102Q8N9M5 508 aaPredicted RBP8.34□□□□□ -1.07
GARNL3-218ENST00000487565 USP38Q8NB14 1042 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 ENOX1Q8TC92 643 aaKnown RBP8.34□□□□□ -1.07
GARNL3-218ENST00000487565 NOC3LQ8WTT2 800 aaKnown RBP8.34□□□□□ -1.07
GARNL3-218ENST00000487565 POMGNT1Q8WZA1 660 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 CCDC51Q96ER9 411 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 ADPGKQ9BRR6 497 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 MSTO1Q9BUK6 570 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 HTATIP2Q9BUP3 242 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 TARS2Q9BW92 718 aaKnown RBP8.34□□□□□ -1.07
GARNL3-218ENST00000487565 IKZF4Q9H2S9 585 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 PDZD7Q9H5P4 517 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 AGPAT5Q9NUQ2 364 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 MAGEC2Q9UBF1 373 aaPredicted RBP8.34□□□□□ -1.07
GARNL3-218ENST00000487565 TRAF3IP3Q9Y228 551 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 NOC2LQ9Y3T9 749 aaKnown RBP8.34□□□□□ -1.07
GARNL3-218ENST00000487565 NFE2L3Q9Y4A8 694 aa8.34□□□□□ -1.07
GARNL3-218ENST00000487565 MYH11P35749 1972 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 ANKRD63C9JTQ0 380 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 KIAA0391O15091 583 aaKnown RBP8.33□□□□□ -1.08
GARNL3-218ENST00000487565 CETN3O15182 167 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 GPR182O15218 404 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 SLC16A3O15427 465 aaKnown RBP8.33□□□□□ -1.08
GARNL3-218ENST00000487565 CLDN3O15551 220 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 TGFB1I1O43294 461 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 EXOC3O60645 756 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 PARNO95453 639 aaKnown RBP8.33□□□□□ -1.08
GARNL3-218ENST00000487565 EPB41P11171 864 aaKnown RBP8.33□□□□□ -1.08
GARNL3-218ENST00000487565 ARF4P18085 180 aaPredicted RBP8.33□□□□□ -1.08
GARNL3-218ENST00000487565 GARTP22102 1010 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 AXLP30530 894 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 CD52P31358 61 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 CYP2C18P33260 490 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 FKBP3Q00688 224 aaKnown RBP8.33□□□□□ -1.08
GARNL3-218ENST00000487565 NFIL3Q16649 462 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 DUOXA2Q1HG44 320 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 CCDC40Q4G0X9 1142 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 SLFN12LQ6IEE8 588 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 SLC39A4Q6P5W5 647 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 LRRC55Q6ZSA7 311 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 LUZP1Q86V48 1076 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 DHX40Q8IX18 779 aaKnown RBP8.33□□□□□ -1.08
GARNL3-218ENST00000487565 C12orf56Q8IXR9 622 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 C7orf61Q8IZ16 206 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 KAT6AQ92794 2004 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 NXPE3Q969Y0 559 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 KLHDC7BQ96G42 594 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 CPB2Q96IY4 423 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 ACO2Q99798 780 aaKnown RBP8.33□□□□□ -1.08
GARNL3-218ENST00000487565 CBWD1Q9BRT8 395 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 TCHPQ9BT92 498 aa8.33□□□□□ -1.08
GARNL3-218ENST00000487565 IFIH1Q9BYX4 1025 aaKnown RBP8.33□□□□□ -1.08
GARNL3-218ENST00000487565 CDT1Q9H211 546 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms