RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 MAPTP10636 758 aaKnown RBP13.97□□□□□ -0.17
HMGN1-216ENST00000486741 MARSP56192 900 aaKnown RBP13.97□□□□□ -0.17
HMGN1-216ENST00000486741 EIF3EP60228 445 aaKnown RBP13.97□□□□□ -0.17
HMGN1-216ENST00000486741 SARNPP82979 210 aaKnown RBP13.97□□□□□ -0.17
HMGN1-216ENST00000486741 CLEC16AQ2KHT3 1053 aa13.97□□□□□ -0.17
HMGN1-216ENST00000486741 HSDL1Q3SXM5 330 aa13.97□□□□□ -0.17
HMGN1-216ENST00000486741 MCOLN2Q8IZK6 566 aa13.97□□□□□ -0.17
HMGN1-216ENST00000486741 EPS8L3Q8TE67 593 aaKnown RBP13.97□□□□□ -0.17
HMGN1-216ENST00000486741 MBOAT7Q96N66 472 aa13.97□□□□□ -0.17
HMGN1-216ENST00000486741 CPA4Q9UI42 421 aa13.97□□□□□ -0.17
HMGN1-216ENST00000486741 EIF3HO15372 352 aaKnown RBP eCLIP13.97□□□□□ -0.17
HMGN1-216ENST00000486741 FOXR1Q6PIV2 292 aa13.97□□□□□ -0.17
HMGN1-216ENST00000486741 TBC1D31Q96DN5 1066 aa13.97□□□□□ -0.17
HMGN1-216ENST00000486741 KREMEN1Q96MU8 473 aa13.97□□□□□ -0.17
HMGN1-216ENST00000486741 KLF6Q99612 283 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-216ENST00000486741 MYH7P12883 1935 aa13.97□□□□□ -0.17
HMGN1-216ENST00000486741 RARAP10276 462 aa13.96□□□□□ -0.17
HMGN1-216ENST00000486741 CHN1P15882 459 aa13.96□□□□□ -0.17
HMGN1-216ENST00000486741 ARL4CP56559 192 aa13.96□□□□□ -0.17
HMGN1-216ENST00000486741 RNASELQ05823 741 aaKnown RBP13.96□□□□□ -0.17
HMGN1-216ENST00000486741 ZBTB41Q5SVQ8 909 aa13.96□□□□□ -0.17
HMGN1-216ENST00000486741 MPZL3Q6UWV2 235 aa13.96□□□□□ -0.17
HMGN1-216ENST00000486741 EPM2AIP1Q7L775 607 aaPredicted RBP13.96□□□□□ -0.17
HMGN1-216ENST00000486741 AENQ8WTP8 325 aaKnown RBP13.96□□□□□ -0.17
HMGN1-216ENST00000486741 C7orf43Q8WVR3 580 aa13.96□□□□□ -0.17
HMGN1-216ENST00000486741 ALG3Q92685 438 aa13.96□□□□□ -0.17
HMGN1-216ENST00000486741 INPP4AQ96PE3 977 aaPredicted RBP13.96□□□□□ -0.17
HMGN1-216ENST00000486741 H3BRB1 525 aa13.96□□□□□ -0.17
HMGN1-216ENST00000486741 HOXD13P35453 343 aa13.96□□□□□ -0.17
HMGN1-216ENST00000486741 ADCYAP1R1P41586 468 aa13.96□□□□□ -0.17
HMGN1-216ENST00000486741 LAMC2Q13753 1193 aa13.96□□□□□ -0.17
HMGN1-216ENST00000486741 ACOT1Q86TX2 421 aa13.96□□□□□ -0.17
HMGN1-216ENST00000486741 CCDC125Q86Z20 511 aa13.96□□□□□ -0.17
HMGN1-216ENST00000486741 C4orf33Q8N1A6 199 aa13.96□□□□□ -0.17
HMGN1-216ENST00000486741 PPM1NQ8N819 430 aa13.96□□□□□ -0.17
HMGN1-216ENST00000486741 SREK1Q8WXA9 508 aaKnown RBP13.96□□□□□ -0.17
HMGN1-216ENST00000486741 FAM193BQ96PV7 902 aaPredicted RBP13.96□□□□□ -0.17
HMGN1-216ENST00000486741 PRMT1Q99873 361 aaKnown RBP13.96□□□□□ -0.17
HMGN1-216ENST00000486741 TUT1Q9H6E5 874 aaKnown RBP13.96□□□□□ -0.17
HMGN1-216ENST00000486741 PDGFCQ9NRA1 345 aa13.96□□□□□ -0.17
HMGN1-216ENST00000486741 ATRNL1Q5VV63 1379 aa13.96□□□□□ -0.17
HMGN1-216ENST00000486741 CRYBG1Q9Y4K1 1723 aa13.96□□□□□ -0.17
HMGN1-216ENST00000486741 CAND2O75155 1236 aa13.96□□□□□ -0.18
HMGN1-216ENST00000486741 TROVE2P10155 538 aaKnown RBP eCLIP13.96□□□□□ -0.18
HMGN1-216ENST00000486741 ZNF157P51786 506 aaPredicted RBP13.96□□□□□ -0.18
HMGN1-216ENST00000486741 OAZ1P54368 228 aa13.96□□□□□ -0.18
HMGN1-216ENST00000486741 TFDP2Q14188 446 aa13.96□□□□□ -0.18
HMGN1-216ENST00000486741 NAA25Q14CX7 972 aa13.96□□□□□ -0.18
HMGN1-216ENST00000486741 ATP13A4Q4VNC1 1196 aa13.96□□□□□ -0.18
HMGN1-216ENST00000486741 FAXCQ5TGI0 409 aa13.96□□□□□ -0.18
HMGN1-216ENST00000486741 TEX2Q8IWB9 1127 aa13.96□□□□□ -0.18
HMGN1-216ENST00000486741 TTC17Q96AE7 1141 aa13.96□□□□□ -0.18
HMGN1-216ENST00000486741 PCDHB18PQ96TA0 734 aa13.96□□□□□ -0.18
HMGN1-216ENST00000486741 PORCNQ9H237 461 aa13.96□□□□□ -0.18
HMGN1-216ENST00000486741 MAGEB2O15479 319 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 HIBCHQ6NVY1 386 aaPredicted RBP13.95□□□□□ -0.18
HMGN1-216ENST00000486741 LRRC31Q6UY01 552 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 RCOR2Q8IZ40 523 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 SAMD3Q8N6K7 520 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 CCHCR1Q8TD31 782 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 OSMRQ99650 979 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 C10orf88Q9H8K7 445 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 GPATCH2LQ9NWQ4 482 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 NEU2Q9Y3R4 380 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 PLCB4Q15147 1175 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 C6orf163Q5TEZ5 329 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 RWDD4Q6NW29 188 aaKnown RBP13.95□□□□□ -0.18
HMGN1-216ENST00000486741 ARMCX2Q7L311 632 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 ABRAQ8N0Z2 381 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 TRAIPQ9BWF2 469 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 A0A087WUV0 522 aaPredicted RBP13.95□□□□□ -0.18
HMGN1-216ENST00000486741 FRMD3A2A2Y4 597 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 B4GALT5O43286 388 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 FMO1Q01740 532 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 CAPSQ13938 189 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 E2F5Q15329 346 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 TDRD10Q5VZ19 366 aaKnown RBP13.95□□□□□ -0.18
HMGN1-216ENST00000486741 TBC1D1Q86TI0 1168 aaPredicted RBP13.95□□□□□ -0.18
HMGN1-216ENST00000486741 PRUNE1Q86TP1 453 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 GMLQ99445 158 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 NT5C1AQ9BXI3 368 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 PITPNM3Q9BZ71 974 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 SMYD2Q9NRG4 433 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 RBP3P10745 1247 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 ZNF449Q6P9G9 518 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 SLC9A9Q8IVB4 645 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 MCUR1Q96AQ8 359 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 CHST7Q9NS84 486 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 LAMA4Q16363 1823 aa13.95□□□□□ -0.18
HMGN1-216ENST00000486741 SPATA31C2B4DYI2 1134 aa13.94□□□□□ -0.18
HMGN1-216ENST00000486741 PDHXO00330 501 aa13.94□□□□□ -0.18
HMGN1-216ENST00000486741 PLA2G6O60733 806 aa13.94□□□□□ -0.18
HMGN1-216ENST00000486741 APRTP07741 180 aa13.94□□□□□ -0.18
HMGN1-216ENST00000486741 ADORA2AP29274 412 aa13.94□□□□□ -0.18
HMGN1-216ENST00000486741 MMP14P50281 582 aa13.94□□□□□ -0.18
HMGN1-216ENST00000486741 PTENP60484 403 aa13.94□□□□□ -0.18
HMGN1-216ENST00000486741 SPOUT1Q5T280 376 aaKnown RBP13.94□□□□□ -0.18
HMGN1-216ENST00000486741 SCN4BQ8IWT1 228 aa13.94□□□□□ -0.18
HMGN1-216ENST00000486741 VPS52Q8N1B4 723 aa13.94□□□□□ -0.18
HMGN1-216ENST00000486741 SPATA18Q8TC71 538 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms