RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	SPDEF	O95238	335 aa		4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	RHCE	P18577	417 aa		4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	HTR3A	P46098	478 aa		4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	RGS3	P49796	1198 aa		4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	AK2	P54819	239 aa		4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	RHD	Q02161	417 aa		4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	ZNF169	Q14929	603 aa	Predicted RBP	4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	ADRM1	Q16186	407 aa		4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	METTL24	Q5JXM2	366 aa		4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	DARS2	Q6PI48	645 aa	Known RBP	4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	TSHZ1	Q6ZSZ6	1077 aa		4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	TTC7B	Q86TV6	843 aa		4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	ACRBP	Q8NEB7	543 aa		4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	SLC2A13	Q96QE2	648 aa		4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	STRBP	Q96SI9	672 aa	Known RBP	4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	ACO2	Q99798	780 aa	Known RBP	4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	RBM12	Q9NTZ6	932 aa	Known RBP	4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	TUBD1	Q9UJT1	453 aa		4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	TEX14	Q8IWB6	1497 aa		4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	TPP1	O14773	563 aa		4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	HOXA3	O43365	443 aa	Predicted RBP	4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	TUSC2	O75896	110 aa		4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	FSBP	O95073	299 aa		4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	ARIH2	O95376	493 aa		4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	IGKV2-30	P06310	120 aa		4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	RPL17	P18621	184 aa	Known RBP	4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	ZNF280A	P59817	542 aa	Predicted RBP	4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	TRIM25	Q14258	630 aa	Known RBP	4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	ZNF267	Q14586	743 aa	Predicted RBP	4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	IL31	Q6EBC2	164 aa		4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	UNQ6494/PRO21346	Q6UXR6	183 aa		4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	ZNF788	Q6ZQV5	615 aa		4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	CCDC149	Q6ZUS6	474 aa		4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	SLC41A1	Q8IVJ1	513 aa		4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	ZBTB34	Q8NCN2	500 aa		4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	TSPEAR	Q8WU66	669 aa		4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	CDK5RAP3	Q96JB5	506 aa		4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	DCLRE1C	Q96SD1	692 aa	Known RBP	4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	SELENOO	Q9BVL4	669 aa		4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	LSM14B	Q9BX40	385 aa	Known RBP	4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	OSBPL6	Q9BZF3	934 aa		4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	KLK15	Q9H2R5	256 aa		4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	DDX20	Q9UHI6	824 aa	Known RBP	4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	DNM3	Q9UQ16	869 aa		4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	POLH	Q9Y253	713 aa		4.82	□□□□□ -1.64
VPS8-223	ENST00000485024	CAPN8	A6NHC0	703 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	GOLIM4	O00461	696 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	HTRA2	O43464	458 aa	Predicted RBP	4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	MGEA5	O60502	916 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	PROP1	O75360	226 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	ENDOD1	O94919	500 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	GSPT1	P15170	499 aa	Known RBP	4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	DDX6	P26196	483 aa	Known RBP eCLIP	4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	MCAM	P43121	646 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	RARRES1	P49788	294 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	GPSM2	P81274	684 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	MGAT2	Q10469	447 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	IFIT5	Q13325	482 aa	Known RBP	4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	KIAA0753	Q2KHM9	967 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	ANO6	Q4KMQ2	910 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	HSP90AB4P	Q58FF6	505 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	DAAM2	Q86T65	1068 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	PLXDC1	Q8IUK5	500 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	LYSMD2	Q8IV50	215 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	ENAH	Q8N8S7	591 aa	Predicted RBP	4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	DDB2	Q92466	427 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	GJA10	Q969M2	543 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	MTFMT	Q96DP5	389 aa	Known RBP	4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	SLC39A13	Q96H72	371 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	FAM167A	Q96KS9	214 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	MYD88	Q99836	296 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	C7orf25	Q9BPX7	421 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	PDCD2L	Q9BRP1	358 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	ENKD1	Q9H0I2	346 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	NUP62CL	Q9H1M0	184 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	MANSC1	Q9H8J5	431 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	NLRC4	Q9NPP4	1024 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	KLHL11	Q9NVR0	708 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	POLR3B	Q9NW08	1133 aa	Predicted RBP	4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	LRP12	Q9Y561	859 aa		4.81	□□□□□ -1.64
VPS8-223	ENST00000485024	RPTOR	Q8N122	1335 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	CCDC154	A6NI56	674 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	FOXN3	O00409	490 aa	Predicted RBP	4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	PMM2	O15305	246 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	TP73	O15350	636 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	SGTA	O43765	313 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	SEC24D	O94855	1032 aa	Predicted RBP	4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	UBXN7	O94888	489 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	HNRNPL	P14866	589 aa	Known RBP eCLIP	4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	KIR2DL3	P43628	341 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	NEK3	P51956	506 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	CACNA2D1	P54289	1103 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	RNASE9	P60153	205 aa	Known RBP	4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	BTK	Q06187	659 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	FHL1	Q13642	323 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	CCDC157	Q569K6	752 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	ZNF772	Q68DY9	489 aa	Predicted RBP	4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	FAM186B	Q8IYM0	893 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	NRG4	Q8WWG1	115 aa		4.8	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms