RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 MTMR6Q9Y217 621 aa23.36■■□□□ 1.33
USP40-215ENST00000484528 SLC27A5Q9Y2P5 690 aa23.36■■□□□ 1.33
USP40-215ENST00000484528 PPP1R37O75864 691 aa23.35■■□□□ 1.33
USP40-215ENST00000484528 SOAT2O75908 522 aa23.35■■□□□ 1.33
USP40-215ENST00000484528 GPR17Q13304 367 aa23.35■■□□□ 1.33
USP40-215ENST00000484528 TEAD2Q15562 447 aa23.35■■□□□ 1.33
USP40-215ENST00000484528 SLFN12LQ6IEE8 588 aa23.35■■□□□ 1.33
USP40-215ENST00000484528 SV2BQ7L1I2 683 aa23.35■■□□□ 1.33
USP40-215ENST00000484528 ATAD1Q8NBU5 361 aa23.35■■□□□ 1.33
USP40-215ENST00000484528 POMGNT1Q8WZA1 660 aa23.35■■□□□ 1.33
USP40-215ENST00000484528 DNAJC19Q96DA6 116 aa23.35■■□□□ 1.33
USP40-215ENST00000484528 ASB16Q96NS5 453 aa23.35■■□□□ 1.33
USP40-215ENST00000484528 DNAJC25Q9H1X3 360 aa23.35■■□□□ 1.33
USP40-215ENST00000484528 ZFP14Q9HCL3 533 aa23.35■■□□□ 1.33
USP40-215ENST00000484528 LTB4R2Q9NPC1 389 aa23.35■■□□□ 1.33
USP40-215ENST00000484528 STYXL1Q9Y6J8 313 aa23.35■■□□□ 1.33
USP40-215ENST00000484528 A0A087X0B3 334 aa23.34■■□□□ 1.33
USP40-215ENST00000484528 MTMR11A4FU01 709 aa23.34■■□□□ 1.33
USP40-215ENST00000484528 PIRO00625 290 aa23.34■■□□□ 1.33
USP40-215ENST00000484528 VIPR2P41587 438 aa23.34■■□□□ 1.33
USP40-215ENST00000484528 STAT6P42226 847 aa23.34■■□□□ 1.33
USP40-215ENST00000484528 EPHA5P54756 1037 aa23.34■■□□□ 1.33
USP40-215ENST00000484528 CRELD2Q6UXH1 353 aaPredicted RBP23.34■■□□□ 1.33
USP40-215ENST00000484528 C1orf210Q8IVY1 113 aa23.34■■□□□ 1.33
USP40-215ENST00000484528 EFCAB13Q8IY85 973 aa23.34■■□□□ 1.33
USP40-215ENST00000484528 OR10T2Q8NGX3 314 aa23.34■■□□□ 1.33
USP40-215ENST00000484528 SHKBP1Q8TBC3 707 aa23.34■■□□□ 1.33
USP40-215ENST00000484528 HVCN1Q96D96 273 aa23.34■■□□□ 1.33
USP40-215ENST00000484528 OXCT2Q9BYC2 517 aaPredicted RBP23.34■■□□□ 1.33
USP40-215ENST00000484528 SLITRK6Q9H5Y7 841 aa23.34■■□□□ 1.33
USP40-215ENST00000484528 ASB7Q9H672 318 aa23.34■■□□□ 1.33
USP40-215ENST00000484528 BRD9Q9H8M2 597 aa23.34■■□□□ 1.33
USP40-215ENST00000484528 DERAQ9Y315 318 aa23.34■■□□□ 1.33
USP40-215ENST00000484528 ZNF292O60281 2723 aa23.33■■□□□ 1.33
USP40-215ENST00000484528 ANO9A1A5B4 782 aa23.33■■□□□ 1.33
USP40-215ENST00000484528 FAM170BA6NMN3 283 aa23.33■■□□□ 1.33
USP40-215ENST00000484528 MICAL2O94851 1124 aa23.33■■□□□ 1.33
USP40-215ENST00000484528 GCNT3O95395 438 aa23.33■■□□□ 1.33
USP40-215ENST00000484528 IDEP14735 1019 aa23.33■■□□□ 1.33
USP40-215ENST00000484528 GAP43P17677 238 aa23.33■■□□□ 1.33
USP40-215ENST00000484528 ADSSP30520 456 aa23.33■■□□□ 1.33
USP40-215ENST00000484528 CASP5P51878 434 aa23.33■■□□□ 1.33
USP40-215ENST00000484528 CENPPQ6IPU0 288 aa23.33■■□□□ 1.33
USP40-215ENST00000484528 ZSWIM2Q8NEG5 633 aa23.33■■□□□ 1.33
USP40-215ENST00000484528 ZSCAN18Q8TBC5 510 aaPredicted RBP23.33■■□□□ 1.33
USP40-215ENST00000484528 SMARCD2Q92925 531 aa23.33■■□□□ 1.33
USP40-215ENST00000484528 INTS4Q96HW7 963 aaKnown RBP23.33■■□□□ 1.33
USP40-215ENST00000484528 BACH2Q9BYV9 841 aa23.33■■□□□ 1.33
USP40-215ENST00000484528 DPP3Q9NY33 737 aa23.33■■□□□ 1.33
USP40-215ENST00000484528 C2CD2Q9Y426 696 aa23.33■■□□□ 1.33
USP40-215ENST00000484528 NCANO14594 1321 aa23.33■■□□□ 1.32
USP40-215ENST00000484528 A0A1W2PRU2 124 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 K7ELQ4 463 aaPredicted RBP23.32■■□□□ 1.32
USP40-215ENST00000484528 SP9P0CG40 484 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 TARSP26639 723 aaKnown RBP23.32■■□□□ 1.32
USP40-215ENST00000484528 EPHB3P54753 998 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 PLD1Q13393 1074 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 MYBPC2Q14324 1141 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 SLC39A14Q15043 492 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 ARMCX5Q6P1M9 558 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 VITQ6UXI7 678 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 CCDC73Q6ZRK6 1079 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 TMC8Q8IU68 726 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 ADSSL1Q8N142 457 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 PDILTQ8N807 584 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 LEMD2Q8NC56 503 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 KCNG4Q8TDN1 519 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 SAAL1Q96ER3 474 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 PYM1Q9BRP8 204 aaKnown RBP23.32■■□□□ 1.32
USP40-215ENST00000484528 TRMT61BQ9BVS5 477 aaKnown RBP23.32■■□□□ 1.32
USP40-215ENST00000484528 STRA6Q9BX79 667 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 FGFBP2Q9BYJ0 223 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 BCO2Q9BYV7 579 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 SPATA6Q9NWH7 488 aaPredicted RBP23.32■■□□□ 1.32
USP40-215ENST00000484528 SEL1LQ9UBV2 794 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 OTOGLQ3ZCN5 2332 aa23.32■■□□□ 1.32
USP40-215ENST00000484528 NUP210Q8TEM1 1887 aaPredicted RBP23.32■■□□□ 1.32
USP40-215ENST00000484528 STX6O43752 255 aa23.31■■□□□ 1.32
USP40-215ENST00000484528 GDI1P31150 447 aa23.31■■□□□ 1.32
USP40-215ENST00000484528 ALDH1A3P47895 512 aa23.31■■□□□ 1.32
USP40-215ENST00000484528 TAF6P49848 677 aa23.31■■□□□ 1.32
USP40-215ENST00000484528 WNT7BP56706 349 aa23.31■■□□□ 1.32
USP40-215ENST00000484528 SLC39A12Q504Y0 691 aa23.31■■□□□ 1.32
USP40-215ENST00000484528 STXBP5Q5T5C0 1151 aa23.31■■□□□ 1.32
USP40-215ENST00000484528 L1TD1Q5T7N2 865 aaKnown RBP23.31■■□□□ 1.32
USP40-215ENST00000484528 FAM84AQ96KN4 292 aa23.31■■□□□ 1.32
USP40-215ENST00000484528 ACCSQ96QU6 501 aa23.31■■□□□ 1.32
USP40-215ENST00000484528 FAM213AQ9BRX8 229 aa23.31■■□□□ 1.32
USP40-215ENST00000484528 LRRC3Q9BY71 257 aa23.31■■□□□ 1.32
USP40-215ENST00000484528 ZNF334Q9HCZ1 680 aaPredicted RBP23.31■■□□□ 1.32
USP40-215ENST00000484528 CYB561D2O14569 222 aa23.3■■□□□ 1.32
USP40-215ENST00000484528 CYP11A1P05108 521 aa23.3■■□□□ 1.32
USP40-215ENST00000484528 STK38Q15208 465 aa23.3■■□□□ 1.32
USP40-215ENST00000484528 GPIHBP1Q8IV16 184 aa23.3■■□□□ 1.32
USP40-215ENST00000484528 MAML2Q8IZL2 1156 aaPredicted RBP23.3■■□□□ 1.32
USP40-215ENST00000484528 NOC3LQ8WTT2 800 aaKnown RBP23.3■■□□□ 1.32
USP40-215ENST00000484528 DNASE1L2Q92874 299 aa23.3■■□□□ 1.32
USP40-215ENST00000484528 SEPT5Q99719 369 aaPredicted RBP23.3■■□□□ 1.32
USP40-215ENST00000484528 EXOC7Q9UPT5 735 aa23.3■■□□□ 1.32
USP40-215ENST00000484528 GPR179Q6PRD1 2367 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms