RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 SIP14410 1827 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 DOCK1Q14185 1865 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 KIAA1217Q5T5P2 1943 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 GSTTP1A0A1W2PQM5 241 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 LIASO43766 372 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 TJP3O95049 919 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 ATG7O95352 703 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 CALB1P05937 261 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 MMP8P22894 467 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 RPS12P25398 132 aaKnown RBP20.85■□□□□ 0.93
LIMS2-215ENST00000484252 STX2P32856 288 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 MAGEA4P43358 317 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 COPS2P61201 443 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 SMYD5Q6GMV2 418 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 SPATA21Q7Z572 469 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 RBM15Q96T37 977 aaKnown RBP eCLIP20.85■□□□□ 0.93
LIMS2-215ENST00000484252 IMPG2Q9BZV3 1241 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 ABCF3Q9NUQ8 709 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 EURLQ9NYK6 297 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 NUB1Q9Y5A7 615 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 CD2APQ9Y5K6 639 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 ZNF541Q9H0D2 1346 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 LRRIQ4A6NIV6 560 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 GJB6O95452 261 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 LSM8O95777 96 aaKnown RBP20.84■□□□□ 0.93
LIMS2-215ENST00000484252 ZNF132P52740 706 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 NCOA4Q13772 614 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 P3H1Q32P28 736 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 GALNTL6Q49A17 601 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 EAPPQ56P03 285 aaPredicted RBP20.84■□□□□ 0.93
LIMS2-215ENST00000484252 WLSQ5T9L3 541 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 SLC7A3Q8WY07 619 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 GRAMD1AQ96CP6 724 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 PWWP2AQ96N64 755 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 TEX13BQ9BXU2 312 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 CNTNAP2Q9UHC6 1331 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 PHIPQ8WWQ0 1821 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 ADGRA2Q96PE1 1338 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 TMEM191CA6NGB0 347 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 DNALI1O14645 258 aaPredicted RBP20.84■□□□□ 0.93
LIMS2-215ENST00000484252 TMEM191BP0C7N4 346 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 ICAM3P32942 547 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 PTPN7P35236 360 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 RIPK1Q13546 671 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 FAM133BQ5BKY9 247 aaKnown RBP20.84■□□□□ 0.93
LIMS2-215ENST00000484252 CYP4X1Q8N118 509 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 JDP2Q8WYK2 163 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 ZBTB45Q96K62 511 aaPredicted RBP20.84■□□□□ 0.93
LIMS2-215ENST00000484252 SLITRK1Q96PX8 696 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 NIFKQ9BYG3 293 aaKnown RBP20.84■□□□□ 0.93
LIMS2-215ENST00000484252 UBN1Q9NPG3 1134 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 PICK1Q9NRD5 415 aa20.84■□□□□ 0.93
LIMS2-215ENST00000484252 DRG1Q9Y295 367 aaKnown RBP20.84■□□□□ 0.93
LIMS2-215ENST00000484252 ATP4AP20648 1035 aa20.83■□□□□ 0.93
LIMS2-215ENST00000484252 GJC1P36383 396 aa20.83■□□□□ 0.93
LIMS2-215ENST00000484252 RFC5P40937 340 aa20.83■□□□□ 0.93
LIMS2-215ENST00000484252 TAP1Q03518 808 aa20.83■□□□□ 0.93
LIMS2-215ENST00000484252 GRM1Q13255 1194 aa20.83■□□□□ 0.93
LIMS2-215ENST00000484252 MPP2Q14168 576 aa20.83■□□□□ 0.93
LIMS2-215ENST00000484252 TMEM132BQ14DG7 1078 aa20.83■□□□□ 0.93
LIMS2-215ENST00000484252 FAM228AQ86W67 206 aa20.83■□□□□ 0.93
LIMS2-215ENST00000484252 TDRPQ86YL5 185 aa20.83■□□□□ 0.93
LIMS2-215ENST00000484252 UBR7Q8N806 425 aa20.83■□□□□ 0.93
LIMS2-215ENST00000484252 ZNF606Q8WXB4 792 aa20.83■□□□□ 0.93
LIMS2-215ENST00000484252 C9orf72Q96LT7 481 aa20.83■□□□□ 0.93
LIMS2-215ENST00000484252 TGS1Q96RS0 853 aaKnown RBP20.83■□□□□ 0.93
LIMS2-215ENST00000484252 TARS2Q9BW92 718 aaKnown RBP20.83■□□□□ 0.93
LIMS2-215ENST00000484252 ANKFY1Q9P2R3 1169 aa20.83■□□□□ 0.93
LIMS2-215ENST00000484252 ZNF112Q9UJU3 913 aa20.83■□□□□ 0.93
LIMS2-215ENST00000484252 C19orf81C9J6K1 198 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 UBOX5O94941 541 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 CETPP11597 493 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 ANKS1BQ7Z6G8 1248 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 SRRM1Q8IYB3 904 aaKnown RBP20.82■□□□□ 0.92
LIMS2-215ENST00000484252 FAM118BQ9BPY3 351 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 PRKAG3Q9UGI9 489 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 FBXO40Q9UH90 709 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 RLFQ13129 1914 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 COL11A1P12107 1806 aaPredicted RBP20.82■□□□□ 0.92
LIMS2-215ENST00000484252 ATP6V1G2O95670 118 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 KRT1P04264 644 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 PTPRAP18433 802 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 IL9RQ01113 521 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 SF3A3Q12874 501 aaKnown RBP eCLIP20.82■□□□□ 0.92
LIMS2-215ENST00000484252 ZBTB41Q5SVQ8 909 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 ALLCQ8N6M5 410 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 OR5B17Q8NGF7 314 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 GDAP1Q8TB36 358 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 MAML1Q92585 1016 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 ZNF518BQ9C0D4 1074 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 PPCSQ9HAB8 311 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 DDX56Q9NY93 547 aaKnown RBP20.82■□□□□ 0.92
LIMS2-215ENST00000484252 TBK1Q9UHD2 729 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 MCM8Q9UJA3 840 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 ZNF148Q9UQR1 794 aa20.82■□□□□ 0.92
LIMS2-215ENST00000484252 EGFRP00533 1210 aa20.81■□□□□ 0.92
LIMS2-215ENST00000484252 STXBP2Q15833 593 aa20.81■□□□□ 0.92
LIMS2-215ENST00000484252 ZPBP2Q6X784 338 aa20.81■□□□□ 0.92
LIMS2-215ENST00000484252 SAYSD1Q9NPB0 183 aa20.81■□□□□ 0.92
LIMS2-215ENST00000484252 FAM47DPA6NHR8 397 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms