RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 HELQQ8TDG4 1101 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 HPDLQ96IR7 371 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 CCDC42Q96M95 316 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 UROC1Q96N76 676 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 RNF39Q9H2S5 420 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 DEF6Q9H4E7 631 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 KLK14Q9P0G3 267 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 AGAP1Q9UPQ3 857 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 ZKSCAN5Q9Y2L8 839 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.98□□□□□ -0.01
SMAD9-204ENST00000483941 ABHD14A-ACY1A0A1B0GW23 586 aa14.97□□□□□ -0.01
SMAD9-204ENST00000483941 ARHGEF15O94989 841 aa14.97□□□□□ -0.01
SMAD9-204ENST00000483941 CST3P01034 146 aaPredicted RBP14.97□□□□□ -0.01
SMAD9-204ENST00000483941 FAM163BP0C2L3 166 aa14.97□□□□□ -0.01
SMAD9-204ENST00000483941 LRPAP1P30533 357 aa14.97□□□□□ -0.01
SMAD9-204ENST00000483941 POLR2BP30876 1174 aaKnown RBP14.97□□□□□ -0.01
SMAD9-204ENST00000483941 MYL6P60660 151 aa14.97□□□□□ -0.01
SMAD9-204ENST00000483941 TNNC1P63316 161 aa14.97□□□□□ -0.01
SMAD9-204ENST00000483941 KLHL30Q0D2K2 578 aa14.97□□□□□ -0.01
SMAD9-204ENST00000483941 ARHGAP44Q17R89 818 aa14.97□□□□□ -0.01
SMAD9-204ENST00000483941 AGMOQ6ZNB7 445 aa14.97□□□□□ -0.01
SMAD9-204ENST00000483941 ALYREFQ86V81 257 aaKnown RBP14.97□□□□□ -0.01
SMAD9-204ENST00000483941 TET1Q8NFU7 2136 aa14.97□□□□□ -0.01
SMAD9-204ENST00000483941 GAD1Q99259 594 aa14.97□□□□□ -0.01
SMAD9-204ENST00000483941 CARNS1A5YM72 827 aa14.96□□□□□ -0.01
SMAD9-204ENST00000483941 PI4K2BG5E9Z4 385 aa14.96□□□□□ -0.01
SMAD9-204ENST00000483941 RNF225M0QZC1 329 aaPredicted RBP14.96□□□□□ -0.01
SMAD9-204ENST00000483941 MEFVO15553 781 aaPredicted RBP14.96□□□□□ -0.01
SMAD9-204ENST00000483941 ZSCAN12O43309 604 aa14.96□□□□□ -0.01
SMAD9-204ENST00000483941 MLH1P40692 756 aa14.96□□□□□ -0.01
SMAD9-204ENST00000483941 PRKCIP41743 596 aa14.96□□□□□ -0.01
SMAD9-204ENST00000483941 KRT83P78385 493 aa14.96□□□□□ -0.01
SMAD9-204ENST00000483941 CCZ1BP86790 482 aa14.96□□□□□ -0.01
SMAD9-204ENST00000483941 CCZ1P86791 482 aaPredicted RBP14.96□□□□□ -0.01
SMAD9-204ENST00000483941 MAPK8IP2Q13387 824 aaPredicted RBP14.96□□□□□ -0.01
SMAD9-204ENST00000483941 SPA17Q15506 151 aa14.96□□□□□ -0.01
SMAD9-204ENST00000483941 SV2CQ496J9 727 aa14.96□□□□□ -0.01
SMAD9-204ENST00000483941 TDRD12Q587J7 1177 aaKnown RBP14.96□□□□□ -0.01
SMAD9-204ENST00000483941 C9orf57Q5W0N0 161 aa14.96□□□□□ -0.01
SMAD9-204ENST00000483941 HERC6Q8IVU3 1022 aa14.96□□□□□ -0.01
SMAD9-204ENST00000483941 PHOSPHO2Q8TCD6 241 aa14.96□□□□□ -0.01
SMAD9-204ENST00000483941 SHC3Q92529 594 aa14.96□□□□□ -0.01
SMAD9-204ENST00000483941 TATDN2Q93075 761 aa14.96□□□□□ -0.01
SMAD9-204ENST00000483941 ZMAT2Q96NC0 199 aaKnown RBP14.96□□□□□ -0.01
SMAD9-204ENST00000483941 FAM193BQ96PV7 902 aaPredicted RBP14.96□□□□□ -0.01
SMAD9-204ENST00000483941 PPP1R10Q96QC0 940 aaKnown RBP14.96□□□□□ -0.01
SMAD9-204ENST00000483941 PI4K2AQ9BTU6 479 aa14.96□□□□□ -0.01
SMAD9-204ENST00000483941 MRPL9Q9BYD2 267 aaKnown RBP14.96□□□□□ -0.01
SMAD9-204ENST00000483941 XYLT2Q9H1B5 865 aa14.96□□□□□ -0.01
SMAD9-204ENST00000483941 SIX4Q9UIU6 781 aa14.96□□□□□ -0.01
SMAD9-204ENST00000483941 ANO9A1A5B4 782 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 GOLGA6L9A6NEM1 432 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 PIRO00625 290 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 AKR1B10O60218 316 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 BAIAP3O94812 1187 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 USP8P40818 1118 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 TAF6P49848 677 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 PTK2Q05397 1052 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 TUSC3Q13454 348 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 GPNMBQ14956 572 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 WDR72Q3MJ13 1102 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 GLRA4Q5JXX5 417 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 C10orf76Q5T2E6 689 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 GJB7Q6PEY0 223 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 DPH6Q7L8W6 267 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 RTN4RL1Q86UN2 441 aaPredicted RBP14.95□□□□□ -0.02
SMAD9-204ENST00000483941 ZNF677Q86XU0 584 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 NPAS4Q8IUM7 802 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 ARHGEF19Q8IW93 802 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 FAM71AQ8IYT1 594 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 ZNF830Q96NB3 372 aaPredicted RBP14.95□□□□□ -0.02
SMAD9-204ENST00000483941 KCNF1Q9H3M0 494 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 NHEJ1Q9H9Q4 299 aaPredicted RBP14.95□□□□□ -0.02
SMAD9-204ENST00000483941 NUB1Q9Y5A7 615 aa14.95□□□□□ -0.02
SMAD9-204ENST00000483941 TRIOO75962 3097 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 CITO14578 2027 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 PRR33A8MZF0 331 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 FOXN3O00409 490 aaPredicted RBP14.94□□□□□ -0.02
SMAD9-204ENST00000483941 PTGESO14684 152 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 AMHP03971 560 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 KRT5P13647 590 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 PDE6CP51160 858 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 APBA1Q02410 837 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 ARID5AQ03989 594 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 GOLGA8FQ08AF8 430 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 GOLGA8DPQ0D2H9 430 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 NOMO2Q5JPE7 1267 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 PPP1R2P3Q6NXS1 205 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 WDR59Q6PJI9 974 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 IRF2BP2Q7Z5L9 587 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 TMEM139Q8IV31 216 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 CXorf38Q8TB03 319 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 LPPQ93052 612 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 ZFP42Q96MM3 310 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 KREMEN1Q96MU8 473 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 OSBPL7Q9BZF2 842 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 APOBEC3GQ9HC16 384 aaKnown RBP14.94□□□□□ -0.02
SMAD9-204ENST00000483941 CD320Q9NPF0 282 aa14.94□□□□□ -0.02
SMAD9-204ENST00000483941 NXF1Q9UBU9 619 aaKnown RBP14.94□□□□□ -0.02
SMAD9-204ENST00000483941 PCDHB4Q9Y5E5 795 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms