RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 H0YCG3 227 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 FKBP9O95302 570 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.7□□□□□ -0.7
COL12A1-207ENST00000483888 LBRQ14739 615 aaKnown RBP10.7□□□□□ -0.7
COL12A1-207ENST00000483888 AKAP4Q5JQC9 854 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 C6orf10Q5SRN2 563 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 FKBP9P1Q75LS8 142 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 DEFB107AQ8IZN7 70 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 SSH3Q8TE77 659 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 SERHL2Q9H4I8 314 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 SERHLQ9NQF3 203 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 CTNNAL1Q9UBT7 734 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 SLC26A4O43511 780 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 ADAM22Q9P0K1 906 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 ZNF222Q9UK12 451 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 AKAP5P24588 427 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 FXR1P51114 621 aaKnown RBP eCLIP10.7□□□□□ -0.7
COL12A1-207ENST00000483888 ZFP1Q6P2D0 407 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 RDM1Q8NG50 284 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 SLC35G2Q8TBE7 412 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 PYDC1Q8WXC3 89 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 VTA1Q9NP79 307 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 BNC1Q01954 994 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 TMPRSS6Q8IU80 811 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 AIFM3Q96NN9 605 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 FSD1LQ9BXM9 530 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 LEMD3Q9Y2U8 911 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 CYP2E1P05181 493 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-207ENST00000483888 RPL5P46777 297 aaKnown RBP10.7□□□□□ -0.7
COL12A1-207ENST00000483888 ATP12AP54707 1039 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 KCNJ2P63252 427 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 DGCR6LQ9BY27 220 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 WDR12Q9GZL7 423 aaKnown RBP10.7□□□□□ -0.7
COL12A1-207ENST00000483888 NFKBIL1Q9UBC1 381 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-207ENST00000483888 POTECB2RU33 542 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 THRAP10827 490 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 TFE3P19532 575 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-207ENST00000483888 ITGA6P23229 1130 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 ING4Q9UNL4 249 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 ARHGEF12Q9NZN5 1544 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 SPAG6O75602 509 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 GEMIN4P57678 1058 aaKnown RBP10.7□□□□□ -0.7
COL12A1-207ENST00000483888 NAALADL2Q58DX5 795 aa10.7□□□□□ -0.7
COL12A1-207ENST00000483888 DGCR14Q96DF8 476 aaKnown RBP10.7□□□□□ -0.7
COL12A1-207ENST00000483888 MPP3Q13368 585 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 ULK4Q96C45 1275 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 ABCC1P33527 1531 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 BAZ2BQ9UIF8 2168 aaKnown RBP10.69□□□□□ -0.7
COL12A1-207ENST00000483888 MTRF1O75570 445 aaKnown RBP10.69□□□□□ -0.7
COL12A1-207ENST00000483888 ITGAXP20702 1163 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 NR1H2P55055 460 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 SLC18A3Q16572 532 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 RHOT1Q8IXI2 618 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 OR7A2PQ8NGA2 310 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 KLF6Q99612 283 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-207ENST00000483888 MARCH7Q9H992 704 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 ING3Q9NXR8 418 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 EHD3Q9NZN3 535 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 ZNF221Q9UK13 617 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 GYPCP04921 128 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 SLC10A5Q5PT55 438 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 ZMYM1Q5SVZ6 1142 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 PNMA1Q8ND90 353 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 GRPEL2Q8TAA5 225 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 EFCAB1Q9HAE3 211 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 ARHGEF10LQ9HCE6 1279 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 TRPV5Q9NQA5 729 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 ARHGAP31Q2M1Z3 1444 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 LRRIQ4A6NIV6 560 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 KLRF2D3W0D1 207 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 CDC40O60508 579 aaKnown RBP eCLIP10.69□□□□□ -0.7
COL12A1-207ENST00000483888 ABCB1P08183 1280 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-207ENST00000483888 FAM111AQ96PZ2 611 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 TFR2Q9UP52 801 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 ITGA8P53708 1063 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 NRF1Q16656 503 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 ZNF746Q6NUN9 644 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-207ENST00000483888 PDCD10Q9BUL8 212 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 PUS7LQ9H0K6 701 aaKnown RBP10.69□□□□□ -0.7
COL12A1-207ENST00000483888 AGPAT5Q9NUQ2 364 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 H2AFY2Q9P0M6 372 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-207ENST00000483888 NDUFB5O43674 189 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 KCNT1Q5JUK3 1230 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 CCDC33Q8N5R6 958 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 TMEM206Q9H813 350 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 A1CFQ9NQ94 594 aaKnown RBP10.69□□□□□ -0.7
COL12A1-207ENST00000483888 ZNF624Q9P2J8 865 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-207ENST00000483888 FOXN3O00409 490 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-207ENST00000483888 GAS2O43903 313 aaKnown RBP10.69□□□□□ -0.7
COL12A1-207ENST00000483888 PLA2G4BP0C869 781 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 IL12AP29459 219 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 TTKP33981 857 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 EFR3AQ14156 821 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 KCTD4Q8WVF5 259 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 KIFC1Q9BW19 673 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 SRP68Q9UHB9 627 aaKnown RBP10.69□□□□□ -0.7
COL12A1-207ENST00000483888 ZBTB1Q9Y2K1 713 aa10.69□□□□□ -0.7
COL12A1-207ENST00000483888 FCGR1AP12314 374 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 DDX5P17844 614 aaKnown RBP10.68□□□□□ -0.7
COL12A1-207ENST00000483888 SVOPQ8N4V2 548 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms