RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 PBKQ96KB5 322 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 KRT12Q99456 494 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 ST7Q9NRC1 585 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 SAGE1Q9NXZ1 904 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 PCDH10Q9P2E7 1040 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 HMGXB4Q9UGU5 601 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 NOC2LQ9Y3T9 749 aaKnown RBP9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 MROH7Q68CQ1 1323 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 ESYT3A0FGR9 886 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 GJB6O95452 261 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 C6orf222P0C671 652 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 DARSP14868 501 aaKnown RBP9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 EIF4BP23588 611 aaKnown RBP9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 PLA2G4AP47712 749 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 PEX5P50542 639 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 PRKCZQ05513 592 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 PTP4A2Q12974 167 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 C11orf63Q6NUN7 778 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 CCNI2Q6ZMN8 369 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 ADAT2Q7Z6V5 191 aaKnown RBP9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 KLHL7Q8IXQ5 586 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 ZDHHC14Q8IZN3 488 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 SH3TC2Q8TF17 1288 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 ACAP3Q96P50 834 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 TWNKQ96RR1 684 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.43□□□□□ -0.97e-7■□□□□ 9.3
CDC42SE1-204ENST00000483763 C11orf70Q9BRQ4 267 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 AP5M1Q9H0R1 490 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 SMYD3Q9H7B4 428 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 SNTG2Q9NY99 539 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 NPTXRO95502 500 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 FGGP02679 453 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 CYBAP13498 195 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 AKR1A1P14550 325 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 POLR2BP30876 1174 aaKnown RBP9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 HOXC8P31273 242 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 NSFP46459 744 aaKnown RBP9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 SNX17Q15036 470 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 CXCL17Q6UXB2 119 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 MMS22LQ6ZRQ5 1243 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 CATSPER4Q7RTX7 472 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 WHAMMQ8TF30 809 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 RNPC3Q96LT9 517 aaKnown RBP9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 GCOM2Q9BZD3 368 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 DDX47Q9H0S4 455 aaKnown RBP9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 NXF3Q9H4D5 531 aaKnown RBP9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 ASB7Q9H672 318 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 Q9Y3F1 56 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 RANBP2P49792 3224 aaKnown RBP9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 PGRMC1O00264 195 aaKnown RBP9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 O00370 1275 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 MAP2K7O14733 419 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 PPEF2O14830 753 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 RAD51CO43502 376 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 AKAP5P24588 427 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 MAMLD1Q13495 774 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 TMEM132DQ14C87 1099 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 LLGL1Q15334 1064 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 GNASQ5JWF2 1037 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 GLRA4Q5JXX5 417 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 C8orf74Q6P047 294 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 REM2Q8IYK8 340 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 WNT8BQ93098 351 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 BCO2Q9BYV7 579 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 RNF39Q9H2S5 420 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 OGFRQ9NZT2 677 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 STIM2Q9P246 746 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 UVRAGQ9P2Y5 699 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 ANAPC7Q9UJX3 599 aa9.42□□□□□ -0.9
CDC42SE1-204ENST00000483763 KRIT1O00522 736 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 SART1O43290 800 aaKnown RBP9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 DUSP11O75319 330 aaKnown RBP9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 PYGMP11217 842 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 GRM5P41594 1212 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 RAD23BP54727 409 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 ZNF667Q5HYK9 610 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 MFSD14CQ5VZR4 134 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 PHF13Q86YI8 300 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 C1orf131Q8NDD1 294 aaKnown RBP9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 C18orf25Q96B23 403 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 KIF12Q96FN5 646 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 ADPGKQ9BRR6 497 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 SELENOOQ9BVL4 669 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 CARD9Q9H257 536 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 ERVK-5Q9HDB9 667 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 ADAM22Q9P0K1 906 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 TJP2Q9UDY2 1190 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 CYTH4Q9UIA0 394 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 AGAP1Q9UPQ3 857 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 TRIP11Q15643 1979 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 TCRBV7S2A1N4TA0A589 114 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 VGLL3A8MV65 326 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 ELNP15502 786 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 MMP8P22894 467 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 RPL7AP62424 266 aaKnown RBP9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 SLC27A1Q6PCB7 646 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 ALKAL1Q6UXT8 129 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 CTU1Q7Z7A3 348 aaKnown RBP9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 C7orf31Q8N865 590 aa9.41□□□□□ -0.9
CDC42SE1-204ENST00000483763 HPDLQ96IR7 371 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms