RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 PTK7Q13308 1070 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 PTGISQ16647 500 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 TEX35Q5T0J7 233 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 NAA35Q5VZE5 725 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 MON1BQ7L1V2 547 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 TTC39CQ8N584 583 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 LRRC52Q8N7C0 313 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 MSANTD4Q8NCY6 345 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 CPA5Q8WXQ8 436 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 TFAP2BQ92481 460 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 ZNF653Q96CK0 615 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 RPS6KC1Q96S38 1066 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 ZNF518BQ9C0D4 1074 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 RNF39Q9H2S5 420 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 PACSIN2Q9UNF0 486 aaPredicted RBP14.97□□□□□ -0.01
CLK3-204ENST00000483723 ST3GAL5Q9UNP4 418 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 ALG6Q9Y672 507 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 FRMPD3Q5JV73 1810 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 LSM8O95777 96 aaKnown RBP14.97□□□□□ -0.01
CLK3-204ENST00000483723 H2AFXP16104 143 aaPredicted RBP14.97□□□□□ -0.01
CLK3-204ENST00000483723 CYP3A5P20815 502 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 AKAP5P24588 427 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 CXCR5P32302 372 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 NSFP46459 744 aaKnown RBP14.97□□□□□ -0.01
CLK3-204ENST00000483723 SCARA5Q6ZMJ2 495 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 SLC43A3Q8NBI5 491 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 NOA1Q8NC60 698 aaKnown RBP14.97□□□□□ -0.01
CLK3-204ENST00000483723 NUP85Q9BW27 656 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 PDCL3Q9H2J4 239 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 SMYD3Q9H7B4 428 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 HMX1Q9NP08 348 aaPredicted RBP14.97□□□□□ -0.01
CLK3-204ENST00000483723 CNOT8Q9UFF9 292 aaKnown RBP14.97□□□□□ -0.01
CLK3-204ENST00000483723 SCN1AP35498 2009 aa14.96□□□□□ -0.01
CLK3-204ENST00000483723 PIRO00625 290 aa14.96□□□□□ -0.01
CLK3-204ENST00000483723 GPR182O15218 404 aa14.96□□□□□ -0.01
CLK3-204ENST00000483723 DDX3YO15523 660 aaKnown RBP14.96□□□□□ -0.01
CLK3-204ENST00000483723 CLSTN1O94985 981 aa14.96□□□□□ -0.01
CLK3-204ENST00000483723 CD4P01730 458 aa14.96□□□□□ -0.01
CLK3-204ENST00000483723 PAFAH1B1P43034 410 aa14.96□□□□□ -0.01
CLK3-204ENST00000483723 RAP1GAPP47736 663 aa14.96□□□□□ -0.01
CLK3-204ENST00000483723 C1QBPQ07021 282 aaKnown RBP14.96□□□□□ -0.01
CLK3-204ENST00000483723 C9orf57Q5W0N0 161 aa14.96□□□□□ -0.01
CLK3-204ENST00000483723 MMGT1Q8N4V1 131 aa14.96□□□□□ -0.01
CLK3-204ENST00000483723 WDTC1Q8N5D0 677 aa14.96□□□□□ -0.01
CLK3-204ENST00000483723 SLC4A11Q8NBS3 891 aa14.96□□□□□ -0.01
CLK3-204ENST00000483723 ARRDC4Q8NCT1 418 aa14.96□□□□□ -0.01
CLK3-204ENST00000483723 ZNF564Q8TBZ8 553 aaPredicted RBP14.96□□□□□ -0.01
CLK3-204ENST00000483723 C18orf25Q96B23 403 aaPredicted RBP14.96□□□□□ -0.01
CLK3-204ENST00000483723 TRAIPQ9BWF2 469 aa14.96□□□□□ -0.01
CLK3-204ENST00000483723 LHX5Q9H2C1 402 aa14.96□□□□□ -0.01
CLK3-204ENST00000483723 ERVK-5Q9HDB9 667 aa14.96□□□□□ -0.01
CLK3-204ENST00000483723 TUBGCP4Q9UGJ1 667 aa14.96□□□□□ -0.01
CLK3-204ENST00000483723 SQORQ9Y6N5 450 aa14.96□□□□□ -0.01
CLK3-204ENST00000483723 XPOTO43592 962 aaKnown RBP14.95□□□□□ -0.02
CLK3-204ENST00000483723 CAND2O75155 1236 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 MMP8P22894 467 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 BRD2P25440 801 aaKnown RBP14.95□□□□□ -0.02
CLK3-204ENST00000483723 GRK4P32298 578 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 MYO1EQ12965 1108 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 CFAP221Q4G0U5 840 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 ZNF394Q53GI3 561 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 FBXO47Q5MNV8 452 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 TWF2Q6IBS0 349 aaKnown RBP14.95□□□□□ -0.02
CLK3-204ENST00000483723 PLEKHA7Q6IQ23 1121 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 MRPL10Q7Z7H8 261 aaKnown RBP14.95□□□□□ -0.02
CLK3-204ENST00000483723 RASGEF1CQ8N431 466 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 SPATA4Q8NEY3 305 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 ACTRT1Q8TDG2 376 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 TMEM176AQ96HP8 235 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 TWNKQ96RR1 684 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 PSMB7Q99436 277 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 ELOVL4Q9GZR5 314 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 ANKZF1Q9H8Y5 726 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 AGO3Q9H9G7 860 aaKnown RBP14.95□□□□□ -0.02
CLK3-204ENST00000483723 PARP2Q9UGN5 583 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 KIAA1257Q9ULG3 409 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 BARX2Q9UMQ3 279 aaPredicted RBP14.95□□□□□ -0.02
CLK3-204ENST00000483723 PPEF2O14830 753 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 ATMINO43313 823 aaPredicted RBP14.95□□□□□ -0.02
CLK3-204ENST00000483723 MED7O43513 233 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 HSPA1AP0DMV8 641 aaKnown RBP14.95□□□□□ -0.02
CLK3-204ENST00000483723 HSPA1BP0DMV9 641 aaKnown RBP14.95□□□□□ -0.02
CLK3-204ENST00000483723 RRM1P23921 792 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 THPOP40225 353 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 TNNC1P63316 161 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 DSC3Q14574 896 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 TMEM35BQ8NCS4 154 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 CAGE1Q8TC20 777 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 CD101Q93033 1021 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 MS4A14Q96JA4 679 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 GLT1D1Q96MS3 346 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 SELENOOQ9BVL4 669 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 APOL6Q9BWW8 343 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 EPC1Q9H2F5 836 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 FAM105AQ9NUU6 356 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 KLK14Q9P0G3 267 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 ADAM22Q9P0K1 906 aa14.95□□□□□ -0.02
CLK3-204ENST00000483723 TTC7AQ9ULT0 858 aaPredicted RBP14.95□□□□□ -0.02
CLK3-204ENST00000483723 TCRBV5S1A1TA0A578 114 aa14.94□□□□□ -0.02
CLK3-204ENST00000483723 FAM170AA1A519 330 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms