RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 CD58P19256 250 aa12.68□□□□□ -0.38
SND1-210ENST00000483503 MMP8P22894 467 aa12.68□□□□□ -0.38
SND1-210ENST00000483503 ASPAP45381 313 aa12.68□□□□□ -0.38
SND1-210ENST00000483503 CARSP49589 748 aaKnown RBP12.68□□□□□ -0.38
SND1-210ENST00000483503 YARSP54577 528 aaKnown RBP12.68□□□□□ -0.38
SND1-210ENST00000483503 SLC10A6Q3KNW5 377 aa12.68□□□□□ -0.38
SND1-210ENST00000483503 SLC27A1Q6PCB7 646 aa12.68□□□□□ -0.38
SND1-210ENST00000483503 CDR2LQ86X02 465 aaPredicted RBP12.68□□□□□ -0.38
SND1-210ENST00000483503 NME8Q8N427 588 aa12.68□□□□□ -0.38
SND1-210ENST00000483503 C1orf127Q8N9H9 656 aa12.68□□□□□ -0.38
SND1-210ENST00000483503 FEZF2Q8TBJ5 459 aa12.68□□□□□ -0.38
SND1-210ENST00000483503 CASKIN2Q8WXE0 1202 aa12.68□□□□□ -0.38
SND1-210ENST00000483503 LRRC45Q96CN5 670 aa12.68□□□□□ -0.38
SND1-210ENST00000483503 C11orf70Q9BRQ4 267 aa12.68□□□□□ -0.38
SND1-210ENST00000483503 FAM129AQ9BZQ8 928 aa12.68□□□□□ -0.38
SND1-210ENST00000483503 DNAI2Q9GZS0 605 aa12.68□□□□□ -0.38
SND1-210ENST00000483503 DDX47Q9H0S4 455 aaKnown RBP12.68□□□□□ -0.38
SND1-210ENST00000483503 NMRK2Q9NPI5 230 aa12.68□□□□□ -0.38
SND1-210ENST00000483503 HOMER3Q9NSC5 361 aa12.68□□□□□ -0.38
SND1-210ENST00000483503 NXF1Q9UBU9 619 aaKnown RBP12.68□□□□□ -0.38
SND1-210ENST00000483503 SIX4Q9UIU6 781 aa12.68□□□□□ -0.38
SND1-210ENST00000483503 KIAA1257Q9ULG3 409 aa12.68□□□□□ -0.38
SND1-210ENST00000483503 ANK1P16157 1881 aa12.68□□□□□ -0.38
SND1-210ENST00000483503 HAS3O00219 553 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 PODXLO00592 558 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 TNPO2O14787 897 aaKnown RBP12.67□□□□□ -0.38
SND1-210ENST00000483503 CALCAP01258 141 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 ITGB3P05106 788 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 MYL3P08590 195 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 WEE2P0C1S8 567 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 ITGA4P13612 1032 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 DARSP14868 501 aaKnown RBP12.67□□□□□ -0.38
SND1-210ENST00000483503 FNTAP49354 379 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 DRG2P55039 364 aaKnown RBP12.67□□□□□ -0.38
SND1-210ENST00000483503 DR1Q01658 176 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 MYO1EQ12965 1108 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 ZNF211Q13398 564 aaPredicted RBP12.67□□□□□ -0.38
SND1-210ENST00000483503 MAMLD1Q13495 774 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 HLTFQ14527 1009 aaKnown RBP eCLIP12.67□□□□□ -0.38
SND1-210ENST00000483503 STILQ15468 1287 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 WDR72Q3MJ13 1102 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 DNAJC24Q6P3W2 148 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 SCARA5Q6ZMJ2 495 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 MMS22LQ6ZRQ5 1243 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 SAPCD2Q86UD0 394 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 ERICH1Q86X53 443 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 SLC13A5Q86YT5 568 aaPredicted RBP12.67□□□□□ -0.38
SND1-210ENST00000483503 PASD1Q8IV76 773 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 RHOT1Q8IXI2 618 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 TMEM192Q8IY95 271 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 GSPT2Q8IYD1 628 aaKnown RBP12.67□□□□□ -0.38
SND1-210ENST00000483503 SEC14L1Q92503 715 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 KRT35Q92764 455 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 KIF12Q96FN5 646 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 HPDLQ96IR7 371 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 BTBD6Q96KE9 485 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 PPP1R16BQ96T49 567 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 MIS12Q9H081 205 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 FAM49AQ9H0Q0 323 aaPredicted RBP12.67□□□□□ -0.38
SND1-210ENST00000483503 DPP3Q9NY33 737 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 WDR35Q9P2L0 1181 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 PCYOX1Q9UHG3 505 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 NFU1Q9UMS0 254 aa12.67□□□□□ -0.38
SND1-210ENST00000483503 C17orf102A2RUQ5 167 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 FSCN2O14926 492 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 POLR3GO15318 223 aaPredicted RBP12.66□□□□□ -0.38
SND1-210ENST00000483503 TLR3O15455 904 aaKnown RBP12.66□□□□□ -0.38
SND1-210ENST00000483503 XPOTO43592 962 aaKnown RBP12.66□□□□□ -0.38
SND1-210ENST00000483503 GPR32O75388 356 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 NPTXRO95502 500 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 PYGMP11217 842 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 VDRP11473 427 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 AKR1A1P14550 325 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 CD19P15391 556 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 CYP2B6P20813 491 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 BRD2P25440 801 aaKnown RBP12.66□□□□□ -0.38
SND1-210ENST00000483503 MRPS25P82663 173 aaKnown RBP12.66□□□□□ -0.38
SND1-210ENST00000483503 MTMR3Q13615 1198 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 CYP1B1Q16678 543 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 KIZQ2M2Z5 673 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 PRAMEF19Q5SWL8 479 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 LRRC38Q5VT99 294 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 C12orf50Q8NA57 414 aaPredicted RBP12.66□□□□□ -0.38
SND1-210ENST00000483503 BEST2Q8NFU1 509 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 KAT2BQ92831 832 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 MAGOHBQ96A72 148 aaKnown RBP12.66□□□□□ -0.38
SND1-210ENST00000483503 FLRT1Q9NZU1 646 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 PARP2Q9UGN5 583 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 CHORDC1Q9UHD1 332 aaPredicted RBP12.66□□□□□ -0.38
SND1-210ENST00000483503 AMACRQ9UHK6 382 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 FEZ2Q9UHY8 353 aaPredicted RBP12.66□□□□□ -0.38
SND1-210ENST00000483503 GJD2Q9UKL4 321 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 AGAP1Q9UPQ3 857 aa12.66□□□□□ -0.38
SND1-210ENST00000483503 GOLGA8KD6RF30 607 aa12.65□□□□□ -0.38
SND1-210ENST00000483503 H3BQF6 201 aa12.65□□□□□ -0.38
SND1-210ENST00000483503 TTI1O43156 1089 aa12.65□□□□□ -0.38
SND1-210ENST00000483503 ADCY6O43306 1168 aa12.65□□□□□ -0.38
SND1-210ENST00000483503 CILPO75339 1184 aa12.65□□□□□ -0.38
SND1-210ENST00000483503 CSDE1O75534 798 aaKnown RBP12.65□□□□□ -0.38
SND1-210ENST00000483503 RPLP2P05387 115 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms