RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 OR6B3Q8NGW1 331 aa7.06□□□□□ -1.28
SF3B1-210ENST00000482158 NMD3Q96D46 503 aaKnown RBP7.06□□□□□ -1.28
SF3B1-210ENST00000482158 SUCLG2Q96I99 432 aa7.06□□□□□ -1.28
SF3B1-210ENST00000482158 MSLNLQ96KJ4 702 aa7.06□□□□□ -1.28
SF3B1-210ENST00000482158 C8orf49Q96NF6 230 aa7.06□□□□□ -1.28
SF3B1-210ENST00000482158 KLC2Q9H0B6 622 aa7.06□□□□□ -1.28
SF3B1-210ENST00000482158 OGDHLQ9ULD0 1010 aa7.06□□□□□ -1.28
SF3B1-210ENST00000482158 USP15Q9Y4E8 981 aaPredicted RBP7.06□□□□□ -1.28
SF3B1-210ENST00000482158 AATKQ6ZMQ8 1374 aa7.06□□□□□ -1.28
SF3B1-210ENST00000482158 ARID1BQ8NFD5 2236 aaPredicted RBP7.05□□□□□ -1.28
SF3B1-210ENST00000482158 TRIM43BA6NCK2 446 aa7.05□□□□□ -1.28
SF3B1-210ENST00000482158 KIF20AO95235 890 aa7.05□□□□□ -1.28
SF3B1-210ENST00000482158 GNAI2P04899 355 aa7.05□□□□□ -1.28
SF3B1-210ENST00000482158 ELANEP08246 267 aa7.05□□□□□ -1.28
SF3B1-210ENST00000482158 PIM1P11309 404 aaPredicted RBP7.05□□□□□ -1.28
SF3B1-210ENST00000482158 ACRV1P26436 265 aa7.05□□□□□ -1.28
SF3B1-210ENST00000482158 TOB1P50616 345 aaPredicted RBP7.05□□□□□ -1.28
SF3B1-210ENST00000482158 CTSWP56202 376 aa7.05□□□□□ -1.28
SF3B1-210ENST00000482158 BIRC2Q13490 618 aa7.05□□□□□ -1.28
SF3B1-210ENST00000482158 TOB2Q14106 344 aaPredicted RBP7.05□□□□□ -1.28
SF3B1-210ENST00000482158 CDSNQ15517 529 aa7.05□□□□□ -1.28
SF3B1-210ENST00000482158 ZNF783Q6ZMS7 281 aa7.05□□□□□ -1.28
SF3B1-210ENST00000482158 SRLQ86TD4 932 aa7.05□□□□□ -1.28
SF3B1-210ENST00000482158 MORC1Q86VD1 984 aa7.05□□□□□ -1.28
SF3B1-210ENST00000482158 CFAP52Q8N1V2 620 aa7.05□□□□□ -1.28
SF3B1-210ENST00000482158 Q8NA96 180 aa7.05□□□□□ -1.28
SF3B1-210ENST00000482158 TRIM43Q96BQ3 446 aaPredicted RBP7.05□□□□□ -1.28
SF3B1-210ENST00000482158 ZSWIM1Q9BR11 485 aa7.05□□□□□ -1.28
SF3B1-210ENST00000482158 SACM1LQ9NTJ5 587 aa7.05□□□□□ -1.28
SF3B1-210ENST00000482158 ETAA1Q9NY74 926 aa7.05□□□□□ -1.28
SF3B1-210ENST00000482158 AFF4Q9UHB7 1163 aaKnown RBP7.05□□□□□ -1.28
SF3B1-210ENST00000482158 TCAF1Q9Y4C2 921 aa7.05□□□□□ -1.28
SF3B1-210ENST00000482158 A0A087WWL8 130 aa7.04□□□□□ -1.28
SF3B1-210ENST00000482158 M0QYG6 137 aa7.04□□□□□ -1.28
SF3B1-210ENST00000482158 TRIM24O15164 1050 aa7.04□□□□□ -1.28
SF3B1-210ENST00000482158 CHEK2O96017 543 aa7.04□□□□□ -1.28
SF3B1-210ENST00000482158 THP07101 528 aa7.04□□□□□ -1.28
SF3B1-210ENST00000482158 SLC11A2P49281 568 aa7.04□□□□□ -1.28
SF3B1-210ENST00000482158 FAM189BP81408 668 aa7.04□□□□□ -1.28
SF3B1-210ENST00000482158 HTRA4P83105 476 aaPredicted RBP7.04□□□□□ -1.28
SF3B1-210ENST00000482158 OCA2Q04671 838 aa7.04□□□□□ -1.28
SF3B1-210ENST00000482158 SLC13A2Q13183 592 aa7.04□□□□□ -1.28
SF3B1-210ENST00000482158 IFIT5Q13325 482 aaKnown RBP7.04□□□□□ -1.28
SF3B1-210ENST00000482158 CNGB1Q14028 1251 aaPredicted RBP7.04□□□□□ -1.28
SF3B1-210ENST00000482158 BOP1Q14137 746 aaKnown RBP7.04□□□□□ -1.28
SF3B1-210ENST00000482158 PRKD1Q15139 912 aaPredicted RBP7.04□□□□□ -1.28
SF3B1-210ENST00000482158 TMPRSS6Q8IU80 811 aa7.04□□□□□ -1.28
SF3B1-210ENST00000482158 RNF152Q8N8N0 203 aa7.04□□□□□ -1.28
SF3B1-210ENST00000482158 NSUN7Q8NE18 718 aaKnown RBP7.04□□□□□ -1.28
SF3B1-210ENST00000482158 ZNF483Q8TF39 744 aaPredicted RBP7.04□□□□□ -1.28
SF3B1-210ENST00000482158 DDX17Q92841 729 aaKnown RBP7.04□□□□□ -1.28
SF3B1-210ENST00000482158 DCLRE1CQ96SD1 692 aaKnown RBP7.04□□□□□ -1.28
SF3B1-210ENST00000482158 MYD88Q99836 296 aa7.04□□□□□ -1.28
SF3B1-210ENST00000482158 UNKQ9C0B0 810 aaKnown RBP7.04□□□□□ -1.28
SF3B1-210ENST00000482158 ZNF768Q9H5H4 540 aaKnown RBP7.04□□□□□ -1.28
SF3B1-210ENST00000482158 CTTNBP2NLQ9P2B4 639 aa7.04□□□□□ -1.28
SF3B1-210ENST00000482158 EIF2B4Q9UI10 523 aaKnown RBP7.04□□□□□ -1.28
SF3B1-210ENST00000482158 SORCS3Q9UPU3 1222 aa7.04□□□□□ -1.28
SF3B1-210ENST00000482158 CDYLQ9Y232 598 aa7.04□□□□□ -1.28
SF3B1-210ENST00000482158 PLEKHM1Q9Y4G2 1056 aa7.04□□□□□ -1.28
SF3B1-210ENST00000482158 SNX13Q9Y5W8 968 aa7.04□□□□□ -1.28
SF3B1-210ENST00000482158 A0A1B0GTW7 788 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 TMEM233B4DJY2 109 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 RASA4BC9J798 803 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 DIRC3C9JPN6 131 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 RASA4O43374 803 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 FOXD2O60548 495 aaPredicted RBP7.03□□□□□ -1.28
SF3B1-210ENST00000482158 GRPP07492 148 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 TSHRP16473 764 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 ZKSCAN1P17029 563 aaPredicted RBP7.03□□□□□ -1.28
SF3B1-210ENST00000482158 FGFR4P22455 802 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 ZFP36P26651 326 aaKnown RBP7.03□□□□□ -1.28
SF3B1-210ENST00000482158 UCP3P55916 312 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 RPS16P62249 146 aaKnown RBP7.03□□□□□ -1.28
SF3B1-210ENST00000482158 POU6F2P78424 691 aaPredicted RBP7.03□□□□□ -1.28
SF3B1-210ENST00000482158 CRHR2Q13324 411 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 BRD3Q15059 726 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 RABL3Q5HYI8 236 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 TOGARAM2Q6ZUX3 1019 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 GDF7Q7Z4P5 450 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 SPICE1Q8N0Z3 855 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 CHST13Q8NET6 341 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 SGCZQ96LD1 299 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 RIPOR3Q96MK2 946 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 PNKPQ96T60 521 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 SMPD4Q9NXE4 827 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 TAGLN3Q9UI15 199 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 ATP11BQ9Y2G3 1177 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 TESMINQ9Y4I5 508 aa7.03□□□□□ -1.28
SF3B1-210ENST00000482158 NCK2O43639 380 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 TBC1D4O60343 1298 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 RPS6KA4O75676 772 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 ZFPL1O95159 310 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 HSD11B2P80365 405 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 DAG1Q14118 895 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 FAM160B1Q5W0V3 765 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 XRRA1Q6P2D8 792 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 TMPRSS9Q7Z410 1059 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 FAM186BQ8IYM0 893 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 SLC15A4Q8N697 577 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms