RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 SSBP3Q9BWW4 388 aaPredicted RBP6.36□□□□□ -1.39
UPF3A-207ENST00000481131 STARD7Q9NQZ5 370 aa6.36□□□□□ -1.39
UPF3A-207ENST00000481131 ZFR2Q9UPR6 939 aaKnown RBP6.36□□□□□ -1.39
UPF3A-207ENST00000481131 FANCD2Q9BXW9 1451 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 ZNF536O15090 1300 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 NPEPPSL1A6NEC2 478 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 DRGXA6NNA5 263 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 PRRG2O14669 202 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 PRICKLE3O43900 615 aaPredicted RBP6.35□□□□□ -1.39
UPF3A-207ENST00000481131 PLATP00750 562 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 HK1P19367 917 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 IL6STP40189 918 aaPredicted RBP6.35□□□□□ -1.39
UPF3A-207ENST00000481131 TRAPPC10P48553 1259 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 ZNF135P52742 658 aaPredicted RBP6.35□□□□□ -1.39
UPF3A-207ENST00000481131 SLC13A2Q13183 592 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 STK3Q13188 491 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 CTBP1Q13363 440 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 PMS2P11Q13670 270 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 NOMO2Q5JPE7 1267 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 IZUMO3Q5VZ72 239 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 METRNLQ641Q3 311 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 HIBCHQ6NVY1 386 aaPredicted RBP6.35□□□□□ -1.39
UPF3A-207ENST00000481131 ZNF783Q6ZMS7 281 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 MED25Q71SY5 747 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 D2HGDHQ8N465 521 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 TBC1D15Q8TC07 691 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 SCAMP4Q969E2 229 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 NEU1Q99519 415 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 TLR10Q9BXR5 811 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 TINAGL1Q9GZM7 467 aaPredicted RBP6.35□□□□□ -1.39
UPF3A-207ENST00000481131 ZCCHC4Q9H5U6 513 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 PNPLA8Q9NP80 782 aa6.35□□□□□ -1.39
UPF3A-207ENST00000481131 CEP164Q9UPV0 1460 aa6.34□□□□□ -1.39
UPF3A-207ENST00000481131 TMEM233B4DJY2 109 aa6.34□□□□□ -1.39
UPF3A-207ENST00000481131 ANXA1P04083 346 aa6.34□□□□□ -1.39
UPF3A-207ENST00000481131 PARP1P09874 1014 aaKnown RBP6.34□□□□□ -1.39
UPF3A-207ENST00000481131 ABCB4P21439 1286 aa6.34□□□□□ -1.39
UPF3A-207ENST00000481131 RABGGTBP53611 331 aa6.34□□□□□ -1.39
UPF3A-207ENST00000481131 CHAF1AQ13111 956 aaPredicted RBP6.34□□□□□ -1.39
UPF3A-207ENST00000481131 HABP2Q14520 560 aaPredicted RBP6.34□□□□□ -1.39
UPF3A-207ENST00000481131 METTL24Q5JXM2 366 aa6.34□□□□□ -1.39
UPF3A-207ENST00000481131 DGKKQ5KSL6 1271 aa6.34□□□□□ -1.39
UPF3A-207ENST00000481131 ZFYVE27Q5T4F4 411 aa6.34□□□□□ -1.39
UPF3A-207ENST00000481131 CCDC33Q8N5R6 958 aa6.34□□□□□ -1.39
UPF3A-207ENST00000481131 FITM2Q8N6M3 262 aa6.34□□□□□ -1.39
UPF3A-207ENST00000481131 ACRBPQ8NEB7 543 aa6.34□□□□□ -1.39
UPF3A-207ENST00000481131 ZC3H10Q96K80 434 aaKnown RBP6.34□□□□□ -1.39
UPF3A-207ENST00000481131 CERS4Q9HA82 394 aa6.34□□□□□ -1.39
UPF3A-207ENST00000481131 VSX1Q9NZR4 365 aaPredicted RBP6.34□□□□□ -1.39
UPF3A-207ENST00000481131 POGKQ9P215 609 aa6.34□□□□□ -1.39
UPF3A-207ENST00000481131 PDS5BQ9NTI5 1447 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 A0A1W2PPC4 97 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 CCDC78A2IDD5 438 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 KLRG2A4D1S0 409 aaPredicted RBP6.33□□□□□ -1.4
UPF3A-207ENST00000481131 TBC1D4O60343 1298 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 MFAP3LO75121 409 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 FGF18O76093 207 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 IPO13O94829 963 aaKnown RBP6.33□□□□□ -1.4
UPF3A-207ENST00000481131 GNAI2P04899 355 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 IL1R1P14778 569 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 SLC11A2P49281 568 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 TCF15Q12870 199 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 GRAMD1BQ3KR37 738 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 Q6ZSN1 163 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 TSHZ1Q6ZSZ6 1077 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 USP37Q86T82 979 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 ENAHQ8N8S7 591 aaPredicted RBP6.33□□□□□ -1.4
UPF3A-207ENST00000481131 PDPRQ8NCN5 879 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 SLC17A8Q8NDX2 589 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 OR56A3Q8NH54 315 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 POF1BQ8WVV4 589 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 ATXN2LQ8WWM7 1075 aaKnown RBP6.33□□□□□ -1.4
UPF3A-207ENST00000481131 PHACTR3Q96KR7 559 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 CRB3Q9BUF7 120 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 COLEC11Q9BWP8 271 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 BRIP1Q9BX63 1249 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 IMPG2Q9BZV3 1241 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 WDR12Q9GZL7 423 aaKnown RBP6.33□□□□□ -1.4
UPF3A-207ENST00000481131 GJB4Q9NTQ9 266 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 TRMT13Q9NUP7 481 aaKnown RBP6.33□□□□□ -1.4
UPF3A-207ENST00000481131 CDC23Q9UJX2 597 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 PADI4Q9UM07 663 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 PCDHGB2Q9Y5G2 931 aa6.33□□□□□ -1.4
UPF3A-207ENST00000481131 URB2Q14146 1524 aaKnown RBP6.32□□□□□ -1.4
UPF3A-207ENST00000481131 A0A087WWL8 130 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 PATE3B3GLJ2 98 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 M0QYG6 137 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 LEFTY2O00292 366 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 KIF20AO95235 890 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 THP07101 528 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 GRPP07492 148 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 PIM1P11309 404 aaPredicted RBP6.32□□□□□ -1.4
UPF3A-207ENST00000481131 HARSP12081 509 aaKnown RBP6.32□□□□□ -1.4
UPF3A-207ENST00000481131 FCER1AP12319 257 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 FDXRP22570 491 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 PPM1AP35813 382 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 UCP3P55916 312 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 DHX8Q14562 1220 aaKnown RBP6.32□□□□□ -1.4
UPF3A-207ENST00000481131 TUBB8Q3ZCM7 444 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 DCAF17Q5H9S7 520 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms