RNA–Protein interactions for RNA: ENST00000481077.6

CNKSR1-206, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 865 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-206ENST00000481077 ATICP31939 592 aa16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 GTF2H1P32780 548 aa16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 OR1D2P34982 312 aa16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 LTBRP36941 435 aa16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 NCOA4Q13772 614 aa16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 MRPL58Q14197 206 aaKnown RBP16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 KLHL40Q2TBA0 621 aa16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 ZACNQ401N2 412 aa16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 DCAF17Q5H9S7 520 aaPredicted RBP16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 CT47A1Q5JQC4 288 aaPredicted RBP16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 TCERG1LQ5VWI1 586 aa16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 ELMSAN1Q6PJG2 1045 aa16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 SV2AQ7L0J3 742 aa16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 FRMD5Q7Z6J6 570 aa16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 PALB2Q86YC2 1186 aa16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 SLC22A17Q8WUG5 538 aa16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 SRRTQ9BXP5 876 aaKnown RBP16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 MMRN2Q9H8L6 949 aa16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 GDAP2Q9NXN4 497 aa16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 DPP7Q9UHL4 492 aa16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 BARX2Q9UMQ3 279 aaPredicted RBP16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 SNX9Q9Y5X1 595 aa16.77■□□□□ 0.28
CNKSR1-206ENST00000481077 SPDYE4A6NLX3 237 aa16.76■□□□□ 0.27
CNKSR1-206ENST00000481077 ADAM12O43184 909 aa16.76■□□□□ 0.27
CNKSR1-206ENST00000481077 TGM5O43548 720 aa16.76■□□□□ 0.27
CNKSR1-206ENST00000481077 ERCC5P28715 1186 aaPredicted RBP16.76■□□□□ 0.27
CNKSR1-206ENST00000481077 GCLMP48507 274 aa16.76■□□□□ 0.27
CNKSR1-206ENST00000481077 MCCD1P59942 119 aaPredicted RBP16.76■□□□□ 0.27
CNKSR1-206ENST00000481077 MYL6P60660 151 aa16.76■□□□□ 0.27
CNKSR1-206ENST00000481077 DLX2Q07687 328 aaPredicted RBP16.76■□□□□ 0.27
CNKSR1-206ENST00000481077 PPP3CAQ08209 521 aa16.76■□□□□ 0.27
CNKSR1-206ENST00000481077 RAB33AQ14088 237 aa16.76■□□□□ 0.27
CNKSR1-206ENST00000481077 TPD52L1Q16890 204 aaPredicted RBP16.76■□□□□ 0.27
CNKSR1-206ENST00000481077 AAK1Q2M2I8 961 aa16.76■□□□□ 0.27
CNKSR1-206ENST00000481077 SLC8B1Q6J4K2 584 aa16.76■□□□□ 0.27
CNKSR1-206ENST00000481077 TMEM8AQ9HCN3 771 aa16.76■□□□□ 0.27
CNKSR1-206ENST00000481077 DZANK1Q9NVP4 752 aa16.76■□□□□ 0.27
CNKSR1-206ENST00000481077 CLEC1BQ9P126 229 aa16.76■□□□□ 0.27
CNKSR1-206ENST00000481077 FBXL5Q9UKA1 691 aa16.76■□□□□ 0.27
CNKSR1-206ENST00000481077 H3BQ06 376 aaPredicted RBP16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 TBC1D4O60343 1298 aa16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 STAU1O95793 577 aaKnown RBP16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 HOXB8P17481 243 aaPredicted RBP16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 PIK3CAP42336 1068 aa16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 ARPP19P56211 112 aa16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 TNNC1P63316 161 aa16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 TFF2Q03403 129 aa16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 STX1AQ16623 288 aa16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 SGSM1Q2NKQ1 1148 aa16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 WSCD1Q658N2 575 aa16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 KRT39Q6A163 491 aa16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 RSPO2Q6UXX9 243 aaPredicted RBP16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 C15orf39Q6ZRI6 1047 aa16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 THEM5Q8N1Q8 247 aa16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 TMEM86AQ8N2M4 240 aa16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 TOP6BLQ8N6T0 577 aa16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 ATXN2LQ8WWM7 1075 aaKnown RBP16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 XYLT2Q9H1B5 865 aa16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 MAN1C1Q9NR34 630 aa16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 ANO10Q9NW15 660 aa16.75■□□□□ 0.27
CNKSR1-206ENST00000481077 OR6C75A6NL08 312 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 VNN1O95497 513 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 HLA-DRAP01903 254 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 SPATA31D3P0C874 917 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 CCDC192P0DO97 292 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 MXI1P50539 228 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 ROR1Q01973 937 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 SKOR2Q2VWA4 1001 aaPredicted RBP16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 ZNF699Q32M78 642 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 WDR72Q3MJ13 1102 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 LEXMQ3ZCV2 418 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 ANKRD54Q6NXT1 300 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 LILRA6Q6PI73 481 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 SPATA31D4Q6ZUB0 917 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 DPH6Q7L8W6 267 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 PDCL2Q8N4E4 241 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 HDAC7Q8WUI4 952 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 TAF4BQ92750 862 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 MSLNLQ96KJ4 702 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 MED15Q96RN5 788 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 MMS19Q96T76 1030 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 IMPG2Q9BZV3 1241 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 PLEKHA4Q9H4M7 779 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 VRTNQ9H8Y1 702 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 CD207Q9UJ71 328 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 L1RE1Q9UN81 338 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 UNC80Q8N2C7 3258 aa16.74■□□□□ 0.27
CNKSR1-206ENST00000481077 LETM1O95202 739 aaPredicted RBP16.73■□□□□ 0.27
CNKSR1-206ENST00000481077 CPB1P15086 417 aa16.73■□□□□ 0.27
CNKSR1-206ENST00000481077 MARSP56192 900 aaKnown RBP16.73■□□□□ 0.27
CNKSR1-206ENST00000481077 MRPS5P82675 430 aaKnown RBP16.73■□□□□ 0.27
CNKSR1-206ENST00000481077 CLUL1Q15846 466 aa16.73■□□□□ 0.27
CNKSR1-206ENST00000481077 SOWAHAQ2M3V2 549 aa16.73■□□□□ 0.27
CNKSR1-206ENST00000481077 ZNF667Q5HYK9 610 aa16.73■□□□□ 0.27
CNKSR1-206ENST00000481077 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.73■□□□□ 0.27
CNKSR1-206ENST00000481077 ADGRF2Q8IZF7 708 aa16.73■□□□□ 0.27
CNKSR1-206ENST00000481077 KREMEN2Q8NCW0 462 aa16.73■□□□□ 0.27
CNKSR1-206ENST00000481077 CCDC150Q8NCX0 1101 aa16.73■□□□□ 0.27
CNKSR1-206ENST00000481077 ZNF461Q8TAF7 563 aa16.73■□□□□ 0.27
CNKSR1-206ENST00000481077 SPATA18Q8TC71 538 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms