RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 SSU72P8A0A1W2PR75 194 aa18.8■□□□□ 0.6
UPF3A-206ENST00000480362 B4GALT3O60512 393 aa18.8■□□□□ 0.6
UPF3A-206ENST00000480362 DGKIO75912 1065 aa18.8■□□□□ 0.6
UPF3A-206ENST00000480362 PTK2Q05397 1052 aa18.8■□□□□ 0.6
UPF3A-206ENST00000480362 DCLRE1AQ6PJP8 1040 aa18.8■□□□□ 0.6
UPF3A-206ENST00000480362 ZNF571Q7Z3V5 609 aaPredicted RBP18.8■□□□□ 0.6
UPF3A-206ENST00000480362 CCDC170Q8IYT3 715 aa18.8■□□□□ 0.6
UPF3A-206ENST00000480362 RBBP8NLQ8NC74 664 aaPredicted RBP18.8■□□□□ 0.6
UPF3A-206ENST00000480362 NRDE2Q9H7Z3 1164 aa18.8■□□□□ 0.6
UPF3A-206ENST00000480362 B3GAT3O94766 335 aa18.79■□□□□ 0.6
UPF3A-206ENST00000480362 CYLC1P35663 651 aaPredicted RBP18.79■□□□□ 0.6
UPF3A-206ENST00000480362 KCNJ6P48051 423 aa18.79■□□□□ 0.6
UPF3A-206ENST00000480362 EPHB4P54760 987 aa18.79■□□□□ 0.6
UPF3A-206ENST00000480362 SOWAHAQ2M3V2 549 aa18.79■□□□□ 0.6
UPF3A-206ENST00000480362 SMYD5Q6GMV2 418 aa18.79■□□□□ 0.6
UPF3A-206ENST00000480362 SLC47A2Q86VL8 602 aa18.79■□□□□ 0.6
UPF3A-206ENST00000480362 TNS4Q8IZW8 715 aa18.79■□□□□ 0.6
UPF3A-206ENST00000480362 C3orf58Q8NDZ4 430 aa18.79■□□□□ 0.6
UPF3A-206ENST00000480362 RSPH1Q8WYR4 309 aa18.79■□□□□ 0.6
UPF3A-206ENST00000480362 SENP8Q96LD8 212 aa18.79■□□□□ 0.6
UPF3A-206ENST00000480362 MRPL9Q9BYD2 267 aaKnown RBP18.79■□□□□ 0.6
UPF3A-206ENST00000480362 DEF6Q9H4E7 631 aa18.79■□□□□ 0.6
UPF3A-206ENST00000480362 ACP6Q9NPH0 428 aa18.79■□□□□ 0.6
UPF3A-206ENST00000480362 DNAJB4Q9UDY4 337 aa18.79■□□□□ 0.6
UPF3A-206ENST00000480362 EPN1Q9Y6I3 576 aaPredicted RBP18.79■□□□□ 0.6
UPF3A-206ENST00000480362 ZBBXA8MT70 800 aa18.78■□□□□ 0.6
UPF3A-206ENST00000480362 CYB561D2O14569 222 aa18.78■□□□□ 0.6
UPF3A-206ENST00000480362 AKR1B10O60218 316 aa18.78■□□□□ 0.6
UPF3A-206ENST00000480362 HUS1O60921 280 aa18.78■□□□□ 0.6
UPF3A-206ENST00000480362 CALCAP01258 141 aa18.78■□□□□ 0.6
UPF3A-206ENST00000480362 CYP11B1P15538 503 aa18.78■□□□□ 0.6
UPF3A-206ENST00000480362 OR1G1P47890 313 aa18.78■□□□□ 0.6
UPF3A-206ENST00000480362 ZNF132P52740 706 aa18.78■□□□□ 0.6
UPF3A-206ENST00000480362 BPIFB4P59827 614 aa18.78■□□□□ 0.6
UPF3A-206ENST00000480362 ASTE1Q2TB18 679 aaPredicted RBP18.78■□□□□ 0.6
UPF3A-206ENST00000480362 PAN2Q504Q3 1202 aaKnown RBP18.78■□□□□ 0.6
UPF3A-206ENST00000480362 ZNF394Q53GI3 561 aa18.78■□□□□ 0.6
UPF3A-206ENST00000480362 TMEM240Q5SV17 173 aa18.78■□□□□ 0.6
UPF3A-206ENST00000480362 FAM117BQ6P1L5 589 aa18.78■□□□□ 0.6
UPF3A-206ENST00000480362 CD300LGQ6UXG3 332 aa18.78■□□□□ 0.6
UPF3A-206ENST00000480362 DSTYKQ6XUX3 929 aa18.78■□□□□ 0.6
UPF3A-206ENST00000480362 LIMS2Q7Z4I7 341 aa18.78■□□□□ 0.6
UPF3A-206ENST00000480362 TMCO2Q7Z6W1 182 aaPredicted RBP18.78■□□□□ 0.6
UPF3A-206ENST00000480362 NOP9Q86U38 636 aaKnown RBP18.78■□□□□ 0.6
UPF3A-206ENST00000480362 TTC39CQ8N584 583 aa18.78■□□□□ 0.6
UPF3A-206ENST00000480362 WHAMMQ8TF30 809 aa18.78■□□□□ 0.6
UPF3A-206ENST00000480362 AGPAT1Q99943 283 aa18.78■□□□□ 0.6
UPF3A-206ENST00000480362 LBHD1Q9BQE6 289 aaPredicted RBP18.78■□□□□ 0.6
UPF3A-206ENST00000480362 MRPL45Q9BRJ2 306 aaKnown RBP18.78■□□□□ 0.6
UPF3A-206ENST00000480362 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.78■□□□□ 0.6
UPF3A-206ENST00000480362 FAM124BQ9H5Z6 455 aaPredicted RBP18.78■□□□□ 0.6
UPF3A-206ENST00000480362 CILPO75339 1184 aa18.77■□□□□ 0.6
UPF3A-206ENST00000480362 NDUFA10O95299 355 aa18.77■□□□□ 0.6
UPF3A-206ENST00000480362 TNFAIP3P21580 790 aa18.77■□□□□ 0.6
UPF3A-206ENST00000480362 PAX3P23760 479 aa18.77■□□□□ 0.6
UPF3A-206ENST00000480362 KIF11P52732 1056 aa18.77■□□□□ 0.6
UPF3A-206ENST00000480362 INCA1Q0VD86 236 aa18.77■□□□□ 0.6
UPF3A-206ENST00000480362 TIGD5Q53EQ6 642 aa18.77■□□□□ 0.6
UPF3A-206ENST00000480362 PSRC1Q6PGN9 363 aaPredicted RBP18.77■□□□□ 0.6
UPF3A-206ENST00000480362 TOGARAM2Q6ZUX3 1019 aa18.77■□□□□ 0.6
UPF3A-206ENST00000480362 DPH6Q7L8W6 267 aa18.77■□□□□ 0.6
UPF3A-206ENST00000480362 TOP6BLQ8N6T0 577 aa18.77■□□□□ 0.6
UPF3A-206ENST00000480362 APPL2Q8NEU8 664 aa18.77■□□□□ 0.6
UPF3A-206ENST00000480362 KIAA1524Q8TCG1 905 aa18.77■□□□□ 0.6
UPF3A-206ENST00000480362 EPS8L1Q8TE68 723 aa18.77■□□□□ 0.6
UPF3A-206ENST00000480362 HASPINQ8TF76 798 aa18.77■□□□□ 0.6
UPF3A-206ENST00000480362 SLC20A1Q8WUM9 679 aa18.77■□□□□ 0.6
UPF3A-206ENST00000480362 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.77■□□□□ 0.61e-8■■■■□ 25.1
UPF3A-206ENST00000480362 SYT11Q9BT88 431 aa18.77■□□□□ 0.6
UPF3A-206ENST00000480362 SPTLC3Q9NUV7 552 aa18.77■□□□□ 0.6
UPF3A-206ENST00000480362 HCSTQ9UBK5 93 aa18.77■□□□□ 0.6
UPF3A-206ENST00000480362 BARX2Q9UMQ3 279 aaPredicted RBP18.77■□□□□ 0.6
UPF3A-206ENST00000480362 L1RE1Q9UN81 338 aa18.77■□□□□ 0.6
UPF3A-206ENST00000480362 FNDC1Q4ZHG4 1894 aaPredicted RBP18.77■□□□□ 0.6
UPF3A-206ENST00000480362 EIF3CLB5ME19 914 aaKnown RBP18.76■□□□□ 0.59
UPF3A-206ENST00000480362 NRP1O14786 923 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 TACC1O75410 805 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 KIF4AO95239 1232 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 ALDH2P05091 517 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 FAM163BP0C2L3 166 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 BRCC3P46736 316 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 AARSP49588 968 aaKnown RBP eCLIP18.76■□□□□ 0.59
UPF3A-206ENST00000480362 PDE6CP51160 858 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 NDST1P52848 882 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 RAD23BP54727 409 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 TAF3Q5VWG9 929 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 VPS36Q86VN1 386 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 ZSCAN30Q86W11 494 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 LRRC43Q8N309 656 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 OR6B3Q8NGW1 331 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 ZNF689Q96CS4 500 aaPredicted RBP18.76■□□□□ 0.59
UPF3A-206ENST00000480362 TMEM176AQ96HP8 235 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 TWNKQ96RR1 684 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 EIF3CQ99613 913 aaKnown RBP18.76■□□□□ 0.59
UPF3A-206ENST00000480362 DESI2Q9BSY9 194 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 ELOVL4Q9GZR5 314 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 ADAMTS1Q9UHI8 967 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 NOCTQ9UK39 431 aaKnown RBP18.76■□□□□ 0.59
UPF3A-206ENST00000480362 FAN1Q9Y2M0 1017 aa18.76■□□□□ 0.59
UPF3A-206ENST00000480362 A0A087X0T9 212 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms