RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 BACE2Q9Y5Z0 518 aa8.87□□□□□ -0.99
USP54-212ENST00000480210 ATG2AQ2TAZ0 1938 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 OR6C75A6NL08 312 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 CYB561D2O14569 222 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 GRM6O15303 877 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 B4GALT3O60512 393 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 TACC1O75410 805 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 OAZ2O95190 189 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 ASS1P00966 412 aaKnown RBP8.86□□□□□ -0.99
USP54-212ENST00000480210 HLA-DRAP01903 254 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 ZNF18P17022 549 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 TBXAS1P24557 533 aaPredicted RBP8.86□□□□□ -0.99
USP54-212ENST00000480210 PIK3CAP42336 1068 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 GCLMP48507 274 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 YWHAEP62258 255 aaKnown RBP8.86□□□□□ -0.99
USP54-212ENST00000480210 TNNC1P63316 161 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 MYL7Q01449 175 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 YWHAHQ04917 246 aaPredicted RBP8.86□□□□□ -0.99
USP54-212ENST00000480210 GRIN2CQ14957 1233 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 NCAPHQ15003 741 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 IQCB1Q15051 598 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 ZNF699Q32M78 642 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 VWA3BQ502W6 1294 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 TDRD10Q5VZ19 366 aaKnown RBP8.86□□□□□ -0.99
USP54-212ENST00000480210 LMBRD2Q68DH5 695 aaPredicted RBP8.86□□□□□ -0.99
USP54-212ENST00000480210 ZNF280DQ6N043 979 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 GBP6Q6ZN66 633 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 DEFB123Q8N688 67 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 AOPEPQ8N6M6 819 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 MRPL43Q8N983 215 aaKnown RBP8.86□□□□□ -0.99
USP54-212ENST00000480210 EHBP1Q8NDI1 1231 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 HDAC7Q8WUI4 952 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 JAKMIP2Q96AA8 810 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 EEF2KMTQ96G04 330 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 TCF25Q9BQ70 676 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 NDST4Q9H3R1 872 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 NSUN3Q9H649 340 aaKnown RBP8.86□□□□□ -0.99
USP54-212ENST00000480210 CERS4Q9HA82 394 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 ENTPD7Q9NQZ7 604 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 SAMSN1Q9NSI8 373 aaKnown RBP8.86□□□□□ -0.99
USP54-212ENST00000480210 HCSTQ9UBK5 93 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 MTUS1Q9ULD2 1270 aa8.86□□□□□ -0.99
USP54-212ENST00000480210 PRRC2BQ5JSZ5 2229 aaKnown RBP8.85□□□□□ -0.99
USP54-212ENST00000480210 PTPRJQ12913 1337 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 COL4A4P53420 1690 aaPredicted RBP8.85□□□□□ -0.99
USP54-212ENST00000480210 LILRB3O75022 631 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 VNN1O95497 513 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 ADH1AP07327 375 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 TRIM49P0CI25 452 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 TRIM49CP0CI26 452 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 SRGAP2BP0DMP2 458 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 WARSP23381 471 aaKnown RBP8.85□□□□□ -0.99
USP54-212ENST00000480210 PCSK1P29120 753 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 PBX3P40426 434 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 BRCC3P46736 316 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 GUCY2FP51841 1108 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 ERVFC1P60507 584 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 MYL6P60660 151 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 MAPRE1Q15691 268 aaKnown RBP8.85□□□□□ -0.99
USP54-212ENST00000480210 WDR72Q3MJ13 1102 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 FKBP15Q5T1M5 1219 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 OVOS1Q6IE37 1185 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 ENOSF1Q7L5Y1 443 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 LIMS2Q7Z4I7 341 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 UNC93AQ86WB7 457 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 TMEM173Q86WV6 379 aaPredicted RBP8.85□□□□□ -0.99
USP54-212ENST00000480210 CEP57Q86XR8 500 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 DHX40Q8IX18 779 aaKnown RBP8.85□□□□□ -0.99
USP54-212ENST00000480210 DCP1BQ8IZD4 617 aaKnown RBP8.85□□□□□ -0.99
USP54-212ENST00000480210 C3orf58Q8NDZ4 430 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 LNX1Q8TBB1 728 aaPredicted RBP8.85□□□□□ -0.99
USP54-212ENST00000480210 IPO4Q8TEX9 1081 aaKnown RBP8.85□□□□□ -0.99
USP54-212ENST00000480210 GDPD5Q8WTR4 605 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 C2orf15Q8WU43 125 aaKnown RBP8.85□□□□□ -0.99
USP54-212ENST00000480210 RIN2Q8WYP3 895 aaPredicted RBP8.85□□□□□ -0.99
USP54-212ENST00000480210 NT5C1BQ96P26 610 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 ACBD6Q9BR61 282 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 XYLT2Q9H1B5 865 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 PRDM12Q9H4Q4 367 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 CBX8Q9HC52 389 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 MTMR10Q9NXD2 777 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 MTRRQ9UBK8 725 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 SNX9Q9Y5X1 595 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 MTCH2Q9Y6C9 303 aa8.85□□□□□ -0.99
USP54-212ENST00000480210 CCDC66A2RUB6 948 aa8.84□□□□□ -0.99
USP54-212ENST00000480210 C2orf71A6NGG8 1288 aa8.84□□□□□ -0.99
USP54-212ENST00000480210 GABRDO14764 452 aa8.84□□□□□ -0.99
USP54-212ENST00000480210 TBC1D4O60343 1298 aa8.84□□□□□ -0.99
USP54-212ENST00000480210 TPM3P06753 285 aa8.84□□□□□ -0.99
USP54-212ENST00000480210 RFX1P22670 979 aa8.84□□□□□ -0.99
USP54-212ENST00000480210 GNL1P36915 607 aaPredicted RBP8.84□□□□□ -0.99
USP54-212ENST00000480210 NDUFV1P49821 464 aa8.84□□□□□ -0.99
USP54-212ENST00000480210 NOP14P78316 857 aaKnown RBP8.84□□□□□ -0.99
USP54-212ENST00000480210 GCNT1Q02742 428 aa8.84□□□□□ -0.99
USP54-212ENST00000480210 SLC20A2Q08357 652 aa8.84□□□□□ -0.99
USP54-212ENST00000480210 CAMK1Q14012 370 aa8.84□□□□□ -0.99
USP54-212ENST00000480210 KRT31Q15323 416 aa8.84□□□□□ -0.99
USP54-212ENST00000480210 PTPN14Q15678 1187 aa8.84□□□□□ -0.99
USP54-212ENST00000480210 PSMD5Q16401 504 aa8.84□□□□□ -0.99
USP54-212ENST00000480210 EXOC3L4Q17RC7 722 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms