RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 SESTD1Q86VW0 696 aa10.49□□□□□ -0.73
RAD51B-208ENST00000479335 LRRC52Q8N7C0 313 aa10.49□□□□□ -0.73
RAD51B-208ENST00000479335 EIF1ADQ8N9N8 165 aaKnown RBP10.49□□□□□ -0.73
RAD51B-208ENST00000479335 BEST2Q8NFU1 509 aa10.49□□□□□ -0.73
RAD51B-208ENST00000479335 CPA5Q8WXQ8 436 aa10.49□□□□□ -0.73
RAD51B-208ENST00000479335 HPDLQ96IR7 371 aa10.49□□□□□ -0.73
RAD51B-208ENST00000479335 SNX27Q96L92 541 aa10.49□□□□□ -0.73
RAD51B-208ENST00000479335 LRRC1Q9BTT6 524 aa10.49□□□□□ -0.73
RAD51B-208ENST00000479335 PLVAPQ9BX97 442 aa10.49□□□□□ -0.73
RAD51B-208ENST00000479335 CELF4Q9BZC1 486 aaKnown RBP10.49□□□□□ -0.73
RAD51B-208ENST00000479335 PARVAQ9NVD7 372 aa10.49□□□□□ -0.73
RAD51B-208ENST00000479335 CNTN3Q9P232 1028 aa10.49□□□□□ -0.73
RAD51B-208ENST00000479335 GTF2IRD1Q9UHL9 959 aa10.49□□□□□ -0.73
RAD51B-208ENST00000479335 L1RE1Q9UN81 338 aa10.49□□□□□ -0.73
RAD51B-208ENST00000479335 AGAP1Q9UPQ3 857 aa10.49□□□□□ -0.73
RAD51B-208ENST00000479335 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.49□□□□□ -0.73
RAD51B-208ENST00000479335 RALGAPA2Q2PPJ7 1873 aa10.49□□□□□ -0.73
RAD51B-208ENST00000479335 TRIP12Q14669 1992 aaPredicted RBP10.49□□□□□ -0.73
RAD51B-208ENST00000479335 SCN10AQ9Y5Y9 1956 aa10.49□□□□□ -0.73
RAD51B-208ENST00000479335 M0QZ92 97 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 MYO1FO00160 1098 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 CILPO75339 1184 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 GNRH1P01148 92 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 CD58P19256 250 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 COMTP21964 271 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 FGFR4P22455 802 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 RRM1P23921 792 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 CST5P28325 142 aaPredicted RBP10.48□□□□□ -0.73
RAD51B-208ENST00000479335 POLR2BP30876 1174 aaKnown RBP10.48□□□□□ -0.73
RAD51B-208ENST00000479335 CTNNA1P35221 906 aaKnown RBP10.48□□□□□ -0.73
RAD51B-208ENST00000479335 DNA2P51530 1060 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 TAP1Q03518 808 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 CACNB2Q08289 660 aaPredicted RBP10.48□□□□□ -0.73
RAD51B-208ENST00000479335 TMEM62Q0P6H9 643 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 INCA1Q0VD86 236 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 PTP4A2Q12974 167 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 C8orf74Q6P047 294 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.48□□□□□ -0.732e-6■■■■■ 43.6
RAD51B-208ENST00000479335 KIF12Q96FN5 646 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 ZSWIM1Q9BR11 485 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 TRIM6Q9C030 488 aaPredicted RBP10.48□□□□□ -0.73
RAD51B-208ENST00000479335 ARHGAP39Q9C0H5 1083 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 SLITRK6Q9H5Y7 841 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 SNTG2Q9NY99 539 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 EHD2Q9NZN4 543 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 STIM2Q9P246 746 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 NXF1Q9UBU9 619 aaKnown RBP10.48□□□□□ -0.73
RAD51B-208ENST00000479335 BARX2Q9UMQ3 279 aaPredicted RBP10.48□□□□□ -0.73
RAD51B-208ENST00000479335 UBQLN1Q9UMX0 589 aaKnown RBP10.48□□□□□ -0.73
RAD51B-208ENST00000479335 GINS2Q9Y248 185 aa10.48□□□□□ -0.73
RAD51B-208ENST00000479335 MAP2K7O14733 419 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 SPOPO43791 374 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 ADAMTS4O75173 837 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 CD4P01730 458 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 VDRP11473 427 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 KCNE1P15382 129 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 ATF7P17544 494 aaPredicted RBP10.47□□□□□ -0.73
RAD51B-208ENST00000479335 CYP3A5P20815 502 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 MAN1A1P33908 653 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 RAD23BP54727 409 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 MRPS6P82932 125 aaKnown RBP10.47□□□□□ -0.73
RAD51B-208ENST00000479335 ZNF200P98182 395 aaPredicted RBP10.47□□□□□ -0.73
RAD51B-208ENST00000479335 PRKCZQ05513 592 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 STILQ15468 1287 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 NBPF20Q3BBV1 942 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 HDXQ7Z353 690 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 IFT20Q8IY31 132 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 PCSK9Q8NBP7 692 aaKnown RBP10.47□□□□□ -0.73
RAD51B-208ENST00000479335 KLHDC9Q8NEP7 349 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 TMEM176AQ96HP8 235 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 CAPNS2Q96L46 248 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 EIF2AQ9BY44 585 aaKnown RBP10.47□□□□□ -0.73
RAD51B-208ENST00000479335 FUT8Q9BYC5 575 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 CHST12Q9NRB3 414 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 SMARCAL1Q9NZC9 954 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 DMGDHQ9UI17 866 aaKnown RBP10.47□□□□□ -0.73
RAD51B-208ENST00000479335 ANAPC7Q9UJX3 599 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 STRIP2Q9ULQ0 834 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 POLIQ9UNA4 740 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 NOC2LQ9Y3T9 749 aaKnown RBP10.47□□□□□ -0.73
RAD51B-208ENST00000479335 TRPV2Q9Y5S1 764 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 MYADML2A6NDP7 307 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 KRIT1O00522 736 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 TLR3O15455 904 aaKnown RBP10.47□□□□□ -0.73
RAD51B-208ENST00000479335 ATMINO43313 823 aaPredicted RBP10.47□□□□□ -0.73
RAD51B-208ENST00000479335 CABYRO75952 493 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 PROSCO94903 275 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 CALCAP01258 141 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 CFHP08603 1231 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 FAM163BP0C2L3 166 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 GSCP56915 257 aaPredicted RBP10.47□□□□□ -0.73
RAD51B-208ENST00000479335 RWDD2BP57060 319 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 PTPN11Q06124 597 aaPredicted RBP10.47□□□□□ -0.73
RAD51B-208ENST00000479335 MAMLD1Q13495 774 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 CNGA2Q16280 664 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 UBXN11Q5T124 520 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 SEL1L2Q5TEA6 688 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 MAATS1Q7Z4T9 603 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 SERINC5Q86VE9 423 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 ERICH1Q86X53 443 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms