RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 TMPRSS15P98073 1019 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 C3orf62Q6ZUJ4 267 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 RAPH1Q70E73 1250 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 RCOR2Q8IZ40 523 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 SCYL1Q96KG9 808 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 AGAP3Q96P47 875 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 SMARCAD1Q9H4L7 1026 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 GPATCH2LQ9NWQ4 482 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 CASZ1Q86V15 1759 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 E2F8A0AVK6 867 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 CCDC160A6NGH7 325 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 OGTO15294 1046 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 STAMBPO95630 424 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 ZSCAN5DPP0CG00 497 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 RPS12P25398 132 aaKnown RBP11.62□□□□□ -0.55
COL27A1-204ENST00000477421 ARPP19P56211 112 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 CAV1Q03135 178 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 KIZQ2M2Z5 673 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 MAP4K3Q8IVH8 894 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 TMC2Q8TDI7 906 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 KCNV2Q8TDN2 545 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 CDKL2Q92772 493 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 CPB2Q96IY4 423 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 ERVK-5Q9HDB9 667 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 FIS1Q9Y3D6 152 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 ZNF142P52746 1687 aaPredicted RBP11.62□□□□□ -0.55
COL27A1-204ENST00000477421 GCLCP48506 637 aaPredicted RBP11.62□□□□□ -0.55
COL27A1-204ENST00000477421 SESN2P58004 480 aaPredicted RBP11.62□□□□□ -0.55
COL27A1-204ENST00000477421 CLEC16AQ2KHT3 1053 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 IER5Q5VY09 327 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 CPNE8Q86YQ8 564 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 TTC13Q8NBP0 860 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 COPS5Q92905 334 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 PCDHB18PQ96TA0 734 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 PIN4Q9Y237 131 aaKnown RBP11.62□□□□□ -0.55
COL27A1-204ENST00000477421 UBIAD1Q9Y5Z9 338 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 ADM5C9JUS6 153 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 TXNDC9O14530 226 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 COPEO14579 308 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 NDC80O14777 642 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 NAMPTP43490 491 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 SLC12A2P55011 1212 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 ROR1Q01973 937 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 SPIRE1Q08AE8 756 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 TMEM132DQ14C87 1099 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 TMEM132BQ14DG7 1078 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 AGBL2Q5U5Z8 902 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 RWDD4Q6NW29 188 aaKnown RBP11.61□□□□□ -0.55
COL27A1-204ENST00000477421 XRRA1Q6P2D8 792 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 TRMT10CQ7L0Y3 403 aaKnown RBP11.61□□□□□ -0.55
COL27A1-204ENST00000477421 PRELID2Q8N945 189 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 KREMEN1Q96MU8 473 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 KLC2Q9H0B6 622 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 SPC25Q9HBM1 224 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 PNMA3Q9UL41 463 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 ADAMTSL3P82987 1691 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 TCRBV7S2A1N4TA0A589 114 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 F8VP50 259 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 XPOTO43592 962 aaKnown RBP11.61□□□□□ -0.55
COL27A1-204ENST00000477421 SLC4A1P02730 911 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 FECHP22830 423 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 NUMBP49757 651 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 DSTYKQ6XUX3 929 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 ZNF662Q6ZS27 426 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 HACE1Q8IYU2 909 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 HIPK4Q8NE63 616 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 CHST13Q8NET6 341 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 RDM1Q8NG50 284 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 OR5B17Q8NGF7 314 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 ASAP3Q8TDY4 903 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 HPDLQ96IR7 371 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 LRRC37BQ96QE4 947 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 CTNNAL1Q9UBT7 734 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 MARCOQ9UEW3 520 aaPredicted RBP11.61□□□□□ -0.55
COL27A1-204ENST00000477421 A0A087WZ62 844 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 HUS1O60921 280 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 CTSHP09668 335 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 GTF2BQ00403 316 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 FMO1Q01740 532 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 ICE2Q659A1 982 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 CEP120Q8N960 986 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 ATP11CQ8NB49 1132 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 AGR3Q8TD06 166 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 PPP4R1Q8TF05 950 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 DEPDC1BQ8WUY9 529 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 FDXACB1Q9BRP7 624 aaPredicted RBP11.61□□□□□ -0.55
COL27A1-204ENST00000477421 SPATC1LQ9H0A9 340 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 SIK2Q9H0K1 926 aa11.61□□□□□ -0.55
COL27A1-204ENST00000477421 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.61□□□□□ -0.55
COL27A1-204ENST00000477421 CFAP69A5D8W1 941 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 PROSCO94903 275 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 CSPG5O95196 566 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 RARGP13631 454 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 RFC5P40937 340 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 FNTAP49354 379 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 MARSP56192 900 aaKnown RBP11.6□□□□□ -0.55
COL27A1-204ENST00000477421 FKBP1AP62942 108 aaKnown RBP11.6□□□□□ -0.55
COL27A1-204ENST00000477421 MUM1Q2TAK8 710 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 ABRAQ8N0Z2 381 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 PDCD7Q8N8D1 485 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms