RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 PLPP4Q5VZY2 271 aa19■□□□□ 0.63
SREBF1-211ENST00000476994 ZNF280BQ86YH2 543 aa19■□□□□ 0.63
SREBF1-211ENST00000476994 SEMA4DQ92854 862 aa19■□□□□ 0.63
SREBF1-211ENST00000476994 ANKRD36BP1Q96IX9 119 aa19■□□□□ 0.63
SREBF1-211ENST00000476994 ERGIC2Q96RQ1 377 aa19■□□□□ 0.63
SREBF1-211ENST00000476994 TCF25Q9BQ70 676 aa19■□□□□ 0.63
SREBF1-211ENST00000476994 KCNH6Q9H252 994 aa19■□□□□ 0.63
SREBF1-211ENST00000476994 MMRN2Q9H8L6 949 aa19■□□□□ 0.63
SREBF1-211ENST00000476994 GOLGA2P5Q9HBQ8 144 aa19■□□□□ 0.63
SREBF1-211ENST00000476994 SPG21Q9NZD8 308 aa19■□□□□ 0.63
SREBF1-211ENST00000476994 HCSTQ9UBK5 93 aa19■□□□□ 0.63
SREBF1-211ENST00000476994 SIK3Q9Y2K2 1263 aa19■□□□□ 0.63
SREBF1-211ENST00000476994 USP15Q9Y4E8 981 aaPredicted RBP19■□□□□ 0.63
SREBF1-211ENST00000476994 PPEF2O14830 753 aa18.99■□□□□ 0.63
SREBF1-211ENST00000476994 CST3P01034 146 aaPredicted RBP18.99■□□□□ 0.63
SREBF1-211ENST00000476994 HLA-DRAP01903 254 aa18.99■□□□□ 0.63
SREBF1-211ENST00000476994 ERVFC1P60507 584 aa18.99■□□□□ 0.63
SREBF1-211ENST00000476994 TMC7Q7Z402 723 aa18.99■□□□□ 0.63
SREBF1-211ENST00000476994 COLGALT2Q8IYK4 626 aa18.99■□□□□ 0.63
SREBF1-211ENST00000476994 BEST2Q8NFU1 509 aa18.99■□□□□ 0.63
SREBF1-211ENST00000476994 URGCPQ8TCY9 931 aa18.99■□□□□ 0.63
SREBF1-211ENST00000476994 CACTINQ8WUQ7 758 aaKnown RBP18.99■□□□□ 0.63
SREBF1-211ENST00000476994 PHF7Q9BWX1 381 aaPredicted RBP18.99■□□□□ 0.63
SREBF1-211ENST00000476994 XYLT2Q9H1B5 865 aa18.99■□□□□ 0.63
SREBF1-211ENST00000476994 SLC38A7Q9NVC3 462 aa18.99■□□□□ 0.63
SREBF1-211ENST00000476994 DPP3Q9NY33 737 aa18.99■□□□□ 0.63
SREBF1-211ENST00000476994 KANSL3Q9P2N6 904 aa18.99■□□□□ 0.63
SREBF1-211ENST00000476994 CACNG4Q9UBN1 327 aa18.99■□□□□ 0.63
SREBF1-211ENST00000476994 ITGA11Q9UKX5 1188 aa18.99■□□□□ 0.63
SREBF1-211ENST00000476994 PCDHGC5Q9Y5F6 944 aa18.99■□□□□ 0.63
SREBF1-211ENST00000476994 PIRO00625 290 aa18.98■□□□□ 0.63
SREBF1-211ENST00000476994 XPOTO43592 962 aaKnown RBP18.98■□□□□ 0.63
SREBF1-211ENST00000476994 GLP2RO95838 553 aa18.98■□□□□ 0.63
SREBF1-211ENST00000476994 TNNC2P02585 160 aa18.98■□□□□ 0.63
SREBF1-211ENST00000476994 ITGB3P05106 788 aa18.98■□□□□ 0.63
SREBF1-211ENST00000476994 IGFBP6P24592 240 aaPredicted RBP18.98■□□□□ 0.63
SREBF1-211ENST00000476994 HOXD11P31277 338 aaPredicted RBP18.98■□□□□ 0.63
SREBF1-211ENST00000476994 ALDH7A1P49419 539 aaKnown RBP18.98■□□□□ 0.63
SREBF1-211ENST00000476994 TUSC3Q13454 348 aa18.98■□□□□ 0.63
SREBF1-211ENST00000476994 C9orf57Q5W0N0 161 aa18.98■□□□□ 0.63
SREBF1-211ENST00000476994 CD300LGQ6UXG3 332 aa18.98■□□□□ 0.63
SREBF1-211ENST00000476994 PAAF1Q9BRP4 392 aa18.98■□□□□ 0.63
SREBF1-211ENST00000476994 NRDE2Q9H7Z3 1164 aa18.98■□□□□ 0.63
SREBF1-211ENST00000476994 SIX2Q9NPC8 291 aa18.98■□□□□ 0.63
SREBF1-211ENST00000476994 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.98■□□□□ 0.63
SREBF1-211ENST00000476994 FSCN2O14926 492 aa18.97■□□□□ 0.63
SREBF1-211ENST00000476994 CA8P35219 290 aa18.97■□□□□ 0.63
SREBF1-211ENST00000476994 ZNF75DP51815 510 aa18.97■□□□□ 0.63
SREBF1-211ENST00000476994 UBXN1Q04323 297 aa18.97■□□□□ 0.63
SREBF1-211ENST00000476994 NCOA4Q13772 614 aa18.97■□□□□ 0.63
SREBF1-211ENST00000476994 SMC1AQ14683 1233 aaKnown RBP18.97■□□□□ 0.63
SREBF1-211ENST00000476994 PTPN21Q16825 1174 aa18.97■□□□□ 0.63
SREBF1-211ENST00000476994 FILIP1LQ4L180 1135 aa18.97■□□□□ 0.63
SREBF1-211ENST00000476994 FBXL13Q8NEE6 735 aa18.97■□□□□ 0.63
SREBF1-211ENST00000476994 EDAQ92838 391 aa18.97■□□□□ 0.63
SREBF1-211ENST00000476994 TMEM169Q96HH4 297 aa18.97■□□□□ 0.63
SREBF1-211ENST00000476994 CRACR2AQ9BSW2 395 aa18.97■□□□□ 0.63
SREBF1-211ENST00000476994 DNAJB4Q9UDY4 337 aa18.97■□□□□ 0.63
SREBF1-211ENST00000476994 A0A1W2PQC6 194 aa18.96■□□□□ 0.63
SREBF1-211ENST00000476994 STAU1O95793 577 aaKnown RBP18.96■□□□□ 0.63
SREBF1-211ENST00000476994 ASS1P00966 412 aaKnown RBP18.96■□□□□ 0.63
SREBF1-211ENST00000476994 TPM2P07951 284 aa18.96■□□□□ 0.63
SREBF1-211ENST00000476994 HOXB8P17481 243 aaPredicted RBP18.96■□□□□ 0.63
SREBF1-211ENST00000476994 SLC9A1P19634 815 aa18.96■□□□□ 0.63
SREBF1-211ENST00000476994 PON1P27169 355 aa18.96■□□□□ 0.63
SREBF1-211ENST00000476994 POLR2BP30876 1174 aaKnown RBP18.96■□□□□ 0.63
SREBF1-211ENST00000476994 KLK7P49862 253 aa18.96■□□□□ 0.63
SREBF1-211ENST00000476994 MRE11P49959 708 aa18.96■□□□□ 0.63
SREBF1-211ENST00000476994 MYL6P60660 151 aa18.96■□□□□ 0.63
SREBF1-211ENST00000476994 BIRC3Q13489 604 aa18.96■□□□□ 0.63
SREBF1-211ENST00000476994 SYCP1Q15431 976 aa18.96■□□□□ 0.63
SREBF1-211ENST00000476994 UPP1Q16831 310 aa18.96■□□□□ 0.63
SREBF1-211ENST00000476994 GBP6Q6ZN66 633 aa18.96■□□□□ 0.63
SREBF1-211ENST00000476994 EHBP1Q8NDI1 1231 aa18.96■□□□□ 0.63
SREBF1-211ENST00000476994 C3orf58Q8NDZ4 430 aa18.96■□□□□ 0.63
SREBF1-211ENST00000476994 CASP10Q92851 521 aa18.96■□□□□ 0.63
SREBF1-211ENST00000476994 RPGRIP1Q96KN7 1286 aa18.96■□□□□ 0.63
SREBF1-211ENST00000476994 INTS2Q9H0H0 1204 aaKnown RBP18.96■□□□□ 0.63
SREBF1-211ENST00000476994 VRTNQ9H8Y1 702 aa18.96■□□□□ 0.63
SREBF1-211ENST00000476994 RAB20Q9NX57 234 aa18.96■□□□□ 0.63
SREBF1-211ENST00000476994 GCNT4Q9P109 453 aa18.96■□□□□ 0.63
SREBF1-211ENST00000476994 TRIOO75962 3097 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 CASTOR2A6NHX0 329 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 LOC730098B7Z3J9 87 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 PES1O00541 588 aaKnown RBP18.95■□□□□ 0.62
SREBF1-211ENST00000476994 CBFA2T2O43439 604 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 RPL9P32969 192 aaKnown RBP18.95■□□□□ 0.62
SREBF1-211ENST00000476994 PIK3CAP42336 1068 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 CLCNKBP51801 687 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 APBA1Q02410 837 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 EXOC3L4Q17RC7 722 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 FKBP15Q5T1M5 1219 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 ANKRD54Q6NXT1 300 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 LLGL2Q6P1M3 1020 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 TRIM65Q6PJ69 517 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 TMEM184AQ6ZMB5 413 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 HFE2Q6ZVN8 426 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 LRRC52Q8N7C0 313 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 ELMO3Q96BJ8 720 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 MRFAP1L1Q96HT8 127 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms