RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 PRRX2Q99811 253 aa6.19□□□□□ -1.42
PTCD3-211ENST00000476215 C22orf23Q9BZE7 217 aa6.19□□□□□ -1.42
PTCD3-211ENST00000476215 DDX21Q9NR30 783 aaKnown RBP eCLIP6.19□□□□□ -1.42
PTCD3-211ENST00000476215 KLHL11Q9NVR0 708 aa6.19□□□□□ -1.42
PTCD3-211ENST00000476215 PIH1D1Q9NWS0 290 aaKnown RBP6.19□□□□□ -1.42
PTCD3-211ENST00000476215 PCDHGB6Q9Y5F9 930 aa6.19□□□□□ -1.42
PTCD3-211ENST00000476215 AHRRA9YTQ3 701 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 SUV39H1O43463 412 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 MGEA5O60502 916 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 RPS6KA4O75676 772 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 FCER1AP12319 257 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 TRIM27P14373 513 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 NPR1P16066 1061 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 NR4A1P22736 598 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 PEX2P28328 305 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 SLC7A1P30825 629 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 PTGS2P35354 604 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 ZNF135P52742 658 aaPredicted RBP6.18□□□□□ -1.42
PTCD3-211ENST00000476215 SLFN5Q08AF3 891 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 EMC10Q5UCC4 262 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 APOA5Q6Q788 366 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 MRGPREQ86SM8 312 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 IL31RAQ8NI17 732 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 SCAMP4Q969E2 229 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 MRGPRX1Q96LB2 322 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 P2RX7Q99572 595 aaKnown RBP6.18□□□□□ -1.42
PTCD3-211ENST00000476215 ZSWIM1Q9BR11 485 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 TLR10Q9BXR5 811 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 TEX101Q9BY14 249 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 RNPEPQ9H4A4 650 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 ARNT2Q9HBZ2 717 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 SLC2A4RGQ9NR83 387 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 TPCN1Q9ULQ1 816 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 CDYLQ9Y232 598 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 CHST2Q9Y4C5 530 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 HS3ST4Q9Y661 456 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.18□□□□□ -1.42
PTCD3-211ENST00000476215 AATKQ6ZMQ8 1374 aa6.18□□□□□ -1.42
PTCD3-211ENST00000476215 A0A1B0GTW7 788 aa6.17□□□□□ -1.42
PTCD3-211ENST00000476215 KRT4P19013 534 aa6.17□□□□□ -1.42
PTCD3-211ENST00000476215 INHBCP55103 352 aa6.17□□□□□ -1.42
PTCD3-211ENST00000476215 SEMA5AQ13591 1074 aa6.17□□□□□ -1.42
PTCD3-211ENST00000476215 SAFBQ15424 915 aaKnown RBP eCLIP6.17□□□□□ -1.42
PTCD3-211ENST00000476215 CRB2Q5IJ48 1285 aa6.17□□□□□ -1.42
PTCD3-211ENST00000476215 ZNF627Q7L945 461 aa6.17□□□□□ -1.42
PTCD3-211ENST00000476215 PDPRQ8NCN5 879 aa6.17□□□□□ -1.42
PTCD3-211ENST00000476215 PJA1Q8NG27 643 aa6.17□□□□□ -1.42
PTCD3-211ENST00000476215 SLC25A43Q8WUT9 341 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-211ENST00000476215 PNKPQ96T60 521 aa6.17□□□□□ -1.42
PTCD3-211ENST00000476215 ZNF768Q9H5H4 540 aaKnown RBP6.17□□□□□ -1.42
PTCD3-211ENST00000476215 GPR35Q9HC97 309 aa6.17□□□□□ -1.42
PTCD3-211ENST00000476215 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-211ENST00000476215 USP25Q9UHP3 1055 aa6.17□□□□□ -1.42
PTCD3-211ENST00000476215 FZD1Q9UP38 647 aa6.17□□□□□ -1.42
PTCD3-211ENST00000476215 WDR33Q9C0J8 1336 aaKnown RBP6.17□□□□□ -1.42
PTCD3-211ENST00000476215 APAF1O14727 1248 aa6.16□□□□□ -1.42
PTCD3-211ENST00000476215 PPFIA4O75335 1185 aa6.16□□□□□ -1.42
PTCD3-211ENST00000476215 ZFP36P26651 326 aaKnown RBP6.16□□□□□ -1.42
PTCD3-211ENST00000476215 HSD11B2P80365 405 aa6.16□□□□□ -1.42
PTCD3-211ENST00000476215 FAM189BP81408 668 aa6.16□□□□□ -1.42
PTCD3-211ENST00000476215 HABP2Q14520 560 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-211ENST00000476215 POLD3Q15054 466 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-211ENST00000476215 MAP9Q49MG5 647 aa6.16□□□□□ -1.42
PTCD3-211ENST00000476215 FOXR2Q6PJQ5 311 aa6.16□□□□□ -1.42
PTCD3-211ENST00000476215 USP37Q86T82 979 aa6.16□□□□□ -1.42
PTCD3-211ENST00000476215 MAPKAPK5Q8IW41 473 aa6.16□□□□□ -1.42
PTCD3-211ENST00000476215 ZNF276Q8N554 614 aa6.16□□□□□ -1.42
PTCD3-211ENST00000476215 NEU4Q8WWR8 484 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-211ENST00000476215 ANKS1AQ92625 1134 aa6.16□□□□□ -1.42
PTCD3-211ENST00000476215 CHFRQ96EP1 664 aa6.16□□□□□ -1.42
PTCD3-211ENST00000476215 APOL5Q9BWW9 433 aa6.16□□□□□ -1.42
PTCD3-211ENST00000476215 LRRC27Q9C0I9 530 aa6.16□□□□□ -1.42
PTCD3-211ENST00000476215 TINAGL1Q9GZM7 467 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-211ENST00000476215 AGAP1Q9UPQ3 857 aa6.16□□□□□ -1.42
PTCD3-211ENST00000476215 USP19O94966 1318 aa6.16□□□□□ -1.42
PTCD3-211ENST00000476215 CCDC78A2IDD5 438 aa6.15□□□□□ -1.42
PTCD3-211ENST00000476215 E9PLN8 166 aa6.15□□□□□ -1.42
PTCD3-211ENST00000476215 M0QYG6 137 aa6.15□□□□□ -1.42
PTCD3-211ENST00000476215 RNASET2O00584 256 aaKnown RBP6.15□□□□□ -1.42
PTCD3-211ENST00000476215 FRS3O43559 492 aa6.15□□□□□ -1.42
PTCD3-211ENST00000476215 PLIN1O60240 522 aa6.15□□□□□ -1.42
PTCD3-211ENST00000476215 PQBP1O60828 265 aaKnown RBP6.15□□□□□ -1.42
PTCD3-211ENST00000476215 ERN1O75460 977 aaKnown RBP6.15□□□□□ -1.42
PTCD3-211ENST00000476215 NCR1O76036 304 aa6.15□□□□□ -1.42
PTCD3-211ENST00000476215 GPANK1O95872 356 aa6.15□□□□□ -1.42
PTCD3-211ENST00000476215 CHEK2O96017 543 aa6.15□□□□□ -1.42
PTCD3-211ENST00000476215 NBPF7P0C2Y1 421 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-211ENST00000476215 MYF5P13349 255 aa6.15□□□□□ -1.42
PTCD3-211ENST00000476215 FGFR4P22455 802 aa6.15□□□□□ -1.42
PTCD3-211ENST00000476215 OCA2Q04671 838 aa6.15□□□□□ -1.42
PTCD3-211ENST00000476215 ZNF844Q08AG5 666 aa6.15□□□□□ -1.42
PTCD3-211ENST00000476215 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-211ENST00000476215 NSUN7Q8NE18 718 aaKnown RBP6.15□□□□□ -1.42
PTCD3-211ENST00000476215 HAS1Q92839 578 aa6.15□□□□□ -1.42
PTCD3-211ENST00000476215 DDX17Q92841 729 aaKnown RBP6.15□□□□□ -1.42
PTCD3-211ENST00000476215 VKORC1Q9BQB6 163 aa6.15□□□□□ -1.42
PTCD3-211ENST00000476215 SLC46A2Q9BY10 475 aa6.15□□□□□ -1.42
PTCD3-211ENST00000476215 SIK2Q9H0K1 926 aa6.15□□□□□ -1.42
PTCD3-211ENST00000476215 HSFX1Q9UBD0 423 aa6.15□□□□□ -1.42
PTCD3-211ENST00000476215 MED16Q9Y2X0 877 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms