RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 BORCS6Q96GS4 357 aa13.39□□□□□ -0.27
LINC00888-202ENST00000471496 CCDC34Q96HJ3 373 aa13.39□□□□□ -0.27
LINC00888-202ENST00000471496 MTRRQ9UBK8 725 aa13.39□□□□□ -0.27
LINC00888-202ENST00000471496 NUB1Q9Y5A7 615 aa13.39□□□□□ -0.27
LINC00888-202ENST00000471496 DOCK6Q96HP0 2047 aa13.38□□□□□ -0.27
LINC00888-202ENST00000471496 TTC28Q96AY4 2481 aa13.38□□□□□ -0.27
LINC00888-202ENST00000471496 SYN3O14994 580 aa13.38□□□□□ -0.27
LINC00888-202ENST00000471496 KINO60870 393 aaKnown RBP13.38□□□□□ -0.27
LINC00888-202ENST00000471496 C1RP00736 705 aa13.38□□□□□ -0.27
LINC00888-202ENST00000471496 BMP6P22004 513 aa13.38□□□□□ -0.27
LINC00888-202ENST00000471496 MCM4P33991 863 aa13.38□□□□□ -0.27
LINC00888-202ENST00000471496 PRCPP42785 496 aa13.38□□□□□ -0.27
LINC00888-202ENST00000471496 TFAMQ00059 246 aaKnown RBP13.38□□□□□ -0.27
LINC00888-202ENST00000471496 CYP24A1Q07973 514 aa13.38□□□□□ -0.27
LINC00888-202ENST00000471496 SMAD4Q13485 552 aaKnown RBP13.38□□□□□ -0.27
LINC00888-202ENST00000471496 PSMD6Q15008 389 aa13.38□□□□□ -0.27
LINC00888-202ENST00000471496 COBLL1Q53SF7 1204 aa13.38□□□□□ -0.27
LINC00888-202ENST00000471496 ZNF658Q5TYW1 1059 aaPredicted RBP13.38□□□□□ -0.27
LINC00888-202ENST00000471496 GLYCTKQ8IVS8 523 aa13.38□□□□□ -0.27
LINC00888-202ENST00000471496 SUSD6Q92537 303 aa13.38□□□□□ -0.27
LINC00888-202ENST00000471496 MFSD14AQ96MC6 490 aa13.38□□□□□ -0.27
LINC00888-202ENST00000471496 INTS13Q9NVM9 706 aa13.38□□□□□ -0.27
LINC00888-202ENST00000471496 SIX4Q9UIU6 781 aa13.38□□□□□ -0.27
LINC00888-202ENST00000471496 CDH22Q9UJ99 828 aa13.38□□□□□ -0.27
LINC00888-202ENST00000471496 PCDHB3Q9Y5E6 796 aa13.38□□□□□ -0.27
LINC00888-202ENST00000471496 BACE2Q9Y5Z0 518 aa13.38□□□□□ -0.27
LINC00888-202ENST00000471496 BDP1A6H8Y1 2624 aa13.38□□□□□ -0.27
LINC00888-202ENST00000471496 TGM5O43548 720 aa13.37□□□□□ -0.27
LINC00888-202ENST00000471496 PAPLNO95428 1278 aa13.37□□□□□ -0.27
LINC00888-202ENST00000471496 NR3C1P04150 777 aa13.37□□□□□ -0.27
LINC00888-202ENST00000471496 HOXB8P17481 243 aaPredicted RBP13.37□□□□□ -0.27
LINC00888-202ENST00000471496 CASP4P49662 377 aa13.37□□□□□ -0.27
LINC00888-202ENST00000471496 CREMQ03060 361 aa13.37□□□□□ -0.27
LINC00888-202ENST00000471496 MYBPC2Q14324 1141 aa13.37□□□□□ -0.27
LINC00888-202ENST00000471496 SMAD2Q15796 467 aaKnown RBP13.37□□□□□ -0.27
LINC00888-202ENST00000471496 NFIL3Q16649 462 aa13.37□□□□□ -0.27
LINC00888-202ENST00000471496 PUS10Q3MIT2 529 aaKnown RBP13.37□□□□□ -0.27
LINC00888-202ENST00000471496 LMBRD2Q68DH5 695 aaPredicted RBP13.37□□□□□ -0.27
LINC00888-202ENST00000471496 PDXDC1Q6P996 788 aa13.37□□□□□ -0.27
LINC00888-202ENST00000471496 ANKS3Q6ZW76 656 aa13.37□□□□□ -0.27
LINC00888-202ENST00000471496 PALB2Q86YC2 1186 aa13.37□□□□□ -0.27
LINC00888-202ENST00000471496 C12orf76Q8N812 135 aaPredicted RBP13.37□□□□□ -0.27
LINC00888-202ENST00000471496 ZNF516Q92618 1163 aa13.37□□□□□ -0.27
LINC00888-202ENST00000471496 SMARCE1Q969G3 411 aa13.37□□□□□ -0.27
LINC00888-202ENST00000471496 POP1Q99575 1024 aaKnown RBP13.37□□□□□ -0.27
LINC00888-202ENST00000471496 COL25A1Q9BXS0 654 aaPredicted RBP13.37□□□□□ -0.27
LINC00888-202ENST00000471496 MTMR12Q9C0I1 747 aa13.37□□□□□ -0.27
LINC00888-202ENST00000471496 LMBRD1Q9NUN5 540 aa13.37□□□□□ -0.27
LINC00888-202ENST00000471496 RMND1Q9NWS8 449 aa13.37□□□□□ -0.27
LINC00888-202ENST00000471496 MAN1B1Q9UKM7 699 aa13.37□□□□□ -0.27
LINC00888-202ENST00000471496 USP15Q9Y4E8 981 aaPredicted RBP13.37□□□□□ -0.27
LINC00888-202ENST00000471496 NCOR1O75376 2440 aa13.37□□□□□ -0.27
LINC00888-202ENST00000471496 EXOC3O60645 756 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 SMC2O95347 1197 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 GLUD1P00367 558 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 ITGB3P05106 788 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 SPATA31D3P0C874 917 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 RAB33AQ14088 237 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 SURF1Q15526 300 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 SLC8B1Q6J4K2 584 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 SPATA31D4Q6ZUB0 917 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 WDR49Q8IV35 697 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 ADAMTS19Q8TE59 1207 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 SENP8Q96LD8 212 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 NECAB3Q96P71 396 aaPredicted RBP13.36□□□□□ -0.27
LINC00888-202ENST00000471496 APOL5Q9BWW9 433 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 IRX2Q9BZI1 471 aaPredicted RBP13.36□□□□□ -0.27
LINC00888-202ENST00000471496 MAN1C1Q9NR34 630 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 DZANK1Q9NVP4 752 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 HOOK1Q9UJC3 728 aaKnown RBP13.36□□□□□ -0.27
LINC00888-202ENST00000471496 TIMM13Q9Y5L4 95 aaPredicted RBP13.36□□□□□ -0.27
LINC00888-202ENST00000471496 CDY1Q9Y6F8 540 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 NOTCH4Q99466 2003 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 CALUO43852 315 aaPredicted RBP13.36□□□□□ -0.27
LINC00888-202ENST00000471496 OAZ2O95190 189 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 KIF20AO95235 890 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 SRGAP2BP0DMP2 458 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 POLR2BP30876 1174 aaKnown RBP13.36□□□□□ -0.27
LINC00888-202ENST00000471496 OR1D2P34982 312 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 PMS1P54277 932 aaKnown RBP13.36□□□□□ -0.27
LINC00888-202ENST00000471496 CLDN10P78369 228 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 ISM2Q6H9L7 571 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 CENPPQ6IPU0 288 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 ADSSL1Q8N142 457 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 PARD3BQ8TEW8 1205 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 CACTINQ8WUQ7 758 aaKnown RBP13.36□□□□□ -0.27
LINC00888-202ENST00000471496 CCDC127Q96BQ5 260 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 CGRRF1Q99675 332 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 ADAM7Q9H2U9 754 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 FBXL5Q9UKA1 691 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 FBXW11Q9UKB1 542 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 ITGA11Q9UKX5 1188 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 AGAP1Q9UPQ3 857 aa13.36□□□□□ -0.27
LINC00888-202ENST00000471496 AKAP3O75969 853 aa13.35□□□□□ -0.27
LINC00888-202ENST00000471496 CYP11A1P05108 521 aa13.35□□□□□ -0.27
LINC00888-202ENST00000471496 TMEM191BP0C7N4 346 aa13.35□□□□□ -0.27
LINC00888-202ENST00000471496 DLATP10515 647 aaKnown RBP13.35□□□□□ -0.27
LINC00888-202ENST00000471496 PAX3P23760 479 aa13.35□□□□□ -0.27
LINC00888-202ENST00000471496 GGCXP38435 758 aa13.35□□□□□ -0.27
LINC00888-202ENST00000471496 TAF6P49848 677 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms