RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 IBSPP21815 317 aaPredicted RBP10.61□□□□□ -0.71
SF3A1-207ENST00000471342 WARSP23381 471 aaKnown RBP10.61□□□□□ -0.71
SF3A1-207ENST00000471342 PIK3CAP42336 1068 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 RAD23BP54727 409 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 ADKP55263 362 aaKnown RBP10.61□□□□□ -0.71
SF3A1-207ENST00000471342 POLR2FP61218 127 aaKnown RBP10.61□□□□□ -0.71
SF3A1-207ENST00000471342 TAP1Q03518 808 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 BIRC3Q13489 604 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 HSP90AA2PQ14568 343 aaPredicted RBP10.61□□□□□ -0.71
SF3A1-207ENST00000471342 WDR72Q3MJ13 1102 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 RTP2Q5QGT7 225 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 KCNT2Q6UVM3 1135 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 TMC6Q7Z403 805 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 PALB2Q86YC2 1186 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 GPIHBP1Q8IV16 184 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 HACE1Q8IYU2 909 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 WDTC1Q8N5D0 677 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 SLC4A11Q8NBS3 891 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 OR10T2Q8NGX3 314 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 SLC30A5Q8TAD4 765 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 HASPINQ8TF76 798 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 DDX27Q96GQ7 796 aaKnown RBP10.61□□□□□ -0.71
SF3A1-207ENST00000471342 IGSF21Q96ID5 467 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 B3GALT6Q96L58 329 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 UROC1Q96N76 676 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 CHP1Q99653 195 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 C17orf80Q9BSJ5 609 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 NIF3L1Q9GZT8 377 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 UBE2TQ9NPD8 197 aaPredicted RBP10.61□□□□□ -0.71
SF3A1-207ENST00000471342 CISHQ9NSE2 258 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 SLC38A7Q9NVC3 462 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 TMLHEQ9NVH6 421 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 ARHGAP20Q9P2F6 1191 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 NOCTQ9UK39 431 aaKnown RBP10.61□□□□□ -0.71
SF3A1-207ENST00000471342 TIMM13Q9Y5L4 95 aaPredicted RBP10.61□□□□□ -0.71
SF3A1-207ENST00000471342 SLC4A7Q9Y6M7 1214 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 SPTBN5Q9NRC6 3674 aaKnown RBP10.61□□□□□ -0.71
SF3A1-207ENST00000471342 SZT2Q5T011 3432 aa10.61□□□□□ -0.71
SF3A1-207ENST00000471342 LRRC53A6NM62 1247 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 CBFA2T2O43439 604 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 LPXNO60711 386 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 ATP2C2O75185 946 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 B3GAT3O94766 335 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 OAZ2O95190 189 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 PLEKP08567 350 aaPredicted RBP10.6□□□□□ -0.71
SF3A1-207ENST00000471342 TKTP29401 623 aaKnown RBP10.6□□□□□ -0.71
SF3A1-207ENST00000471342 PRKCIP41743 596 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 TAF6P49848 677 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 TPM4P67936 248 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 CCZ1BP86790 482 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 CCZ1P86791 482 aaPredicted RBP10.6□□□□□ -0.71
SF3A1-207ENST00000471342 PLCB3Q01970 1234 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 ZNF699Q32M78 642 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 PKDCCQ504Y2 493 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 SMYD5Q6GMV2 418 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 CRYBG2Q8N1P7 616 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 LRRC43Q8N309 656 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 TOP6BLQ8N6T0 577 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 LNX1Q8TBB1 728 aaPredicted RBP10.6□□□□□ -0.71
SF3A1-207ENST00000471342 JAKMIP2Q96AA8 810 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 RPS6KC1Q96S38 1066 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 PCDHB18PQ96TA0 734 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 LBHD1Q9BQE6 289 aaPredicted RBP10.6□□□□□ -0.71
SF3A1-207ENST00000471342 DPEP3Q9H4B8 488 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 NLRC4Q9NPP4 1024 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 CRTAC1Q9NQ79 661 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.6□□□□□ -0.71
SF3A1-207ENST00000471342 PCDHB8Q9UN66 801 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 PRG3Q9Y2Y8 225 aaPredicted RBP10.6□□□□□ -0.71
SF3A1-207ENST00000471342 INSL6Q9Y581 213 aa10.6□□□□□ -0.71
SF3A1-207ENST00000471342 TSC2P49815 1807 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 ZBBXA8MT70 800 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 FSCN2O14926 492 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 ALDH2P05091 517 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 KRT19P08727 400 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 TYMPP19971 482 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 BMPR1AP36894 532 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 OR1G1P47890 313 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 ERVK-21P61565 698 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 ZBED6P86452 979 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 FILIP1LQ4L180 1135 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 FKBP15Q5T1M5 1219 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 FUT10Q6P4F1 479 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 FAM171BQ6P995 826 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 DPH6Q7L8W6 267 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 CCDC186Q7Z3E2 898 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 ZNF571Q7Z3V5 609 aaPredicted RBP10.59□□□□□ -0.71
SF3A1-207ENST00000471342 FEZF2Q8TBJ5 459 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 SPPL3Q8TCT6 385 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 URGCPQ8TCY9 931 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 EPS8L1Q8TE68 723 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 SYN2Q92777 582 aaPredicted RBP10.59□□□□□ -0.71
SF3A1-207ENST00000471342 RNPC3Q96LT9 517 aaKnown RBP10.59□□□□□ -0.71
SF3A1-207ENST00000471342 NT5C1BQ96P26 610 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 MRPL9Q9BYD2 267 aaKnown RBP10.59□□□□□ -0.71
SF3A1-207ENST00000471342 CRISPLD1Q9H336 500 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 CYP3A43Q9HB55 503 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 NXF1Q9UBU9 619 aaKnown RBP10.59□□□□□ -0.71
SF3A1-207ENST00000471342 CYTH4Q9UIA0 394 aa10.59□□□□□ -0.71
SF3A1-207ENST00000471342 ADAM28Q9UKQ2 775 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms