RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 APIPQ96GX9 242 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 ZMAT3Q9HA38 289 aaKnown RBP6.88□□□□□ -1.31
CKS1B-204ENST00000471245 RSAD1Q9HA92 442 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 BARX1Q9HBU1 254 aaPredicted RBP6.88□□□□□ -1.31
CKS1B-204ENST00000471245 PLCB1Q9NQ66 1216 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 TMEM140Q9NV12 185 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 RTEL1Q9NZ71 1219 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 FEZ2Q9UHY8 353 aaPredicted RBP6.88□□□□□ -1.31
CKS1B-204ENST00000471245 ADAM29Q9UKF5 820 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 AATKQ6ZMQ8 1374 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 C9orf118A6NHY6 69 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 RASA4BC9J798 803 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 H3BUI4 141 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 ADCY6O43306 1168 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 RASA4O43374 803 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 TOX4O94842 621 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 JUNP05412 331 aaKnown RBP6.87□□□□□ -1.31
CKS1B-204ENST00000471245 MALP21145 153 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 DUSP2Q05923 314 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 MTM1Q13496 603 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 DHX8Q14562 1220 aaKnown RBP6.87□□□□□ -1.31
CKS1B-204ENST00000471245 KRT72Q14CN4 511 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 DPP9Q86TI2 863 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 ZGPATQ8N5A5 531 aaKnown RBP6.87□□□□□ -1.31
CKS1B-204ENST00000471245 ZSCAN18Q8TBC5 510 aaPredicted RBP6.87□□□□□ -1.31
CKS1B-204ENST00000471245 ANKS1AQ92625 1134 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 PHKBQ93100 1093 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 RAB24Q969Q5 203 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 PWWP2AQ96N64 755 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 SPATA25Q9BR10 227 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 APOL5Q9BWW9 433 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 SENP6Q9GZR1 1112 aaPredicted RBP6.87□□□□□ -1.31
CKS1B-204ENST00000471245 KIAA1683Q9H0B3 1180 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 PNPOQ9NVS9 261 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 ING3Q9NXR8 418 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 ABCF2Q9UG63 623 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 FAM184BQ9ULE4 1060 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 TPCN1Q9ULQ1 816 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 DMTF1Q9Y222 760 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 PCDHA3Q9Y5H8 950 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 RBM8AQ9Y5S9 174 aaKnown RBP6.87□□□□□ -1.31
CKS1B-204ENST00000471245 KAT6BQ8WYB5 2073 aa6.87□□□□□ -1.31
CKS1B-204ENST00000471245 SLIT3O75094 1523 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 ACEP12821 1306 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 TEX33O43247 280 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 GCP02774 474 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 IL2RBP14784 551 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 PI3P19957 117 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 DDCP20711 480 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 CFPP27918 469 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 CTXN1P60606 82 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 SP140Q13342 867 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 GRAMD1BQ3KR37 738 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 XRRA1Q6P2D8 792 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 USP30Q70CQ3 517 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 PDZD4Q76G19 769 aaPredicted RBP6.86□□□□□ -1.31
CKS1B-204ENST00000471245 COL23A1Q86Y22 540 aaPredicted RBP6.86□□□□□ -1.31
CKS1B-204ENST00000471245 IL31RAQ8NI17 732 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 ZC3H10Q96K80 434 aaKnown RBP6.86□□□□□ -1.31
CKS1B-204ENST00000471245 SGCZQ96LD1 299 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 NT5C1BQ96P26 610 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 MPHOSPH9Q99550 1183 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 VRK1Q99986 396 aaPredicted RBP6.86□□□□□ -1.31
CKS1B-204ENST00000471245 SELENOOQ9BVL4 669 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 SLC6A15Q9H2J7 730 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 ARMT1Q9H993 441 aa6.86□□□□□ -1.31
CKS1B-204ENST00000471245 AJAP1Q9UKB5 411 aaPredicted RBP6.86□□□□□ -1.31
CKS1B-204ENST00000471245 PIK3C2AO00443 1686 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 ABHD14A-ACY1A0A1B0GW23 586 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 A0A1W2PPL8 197 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 ISM1B1AKI9 464 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 NT5C1B-RDH14C9J2C7 533 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 CYP1A1P04798 512 aaPredicted RBP6.85□□□□□ -1.31
CKS1B-204ENST00000471245 ZNF888P0CJ79 500 aaPredicted RBP6.85□□□□□ -1.31
CKS1B-204ENST00000471245 SETSIPP0DME0 302 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 SMARCA1P28370 1054 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 SARSP49591 514 aaKnown RBP6.85□□□□□ -1.31
CKS1B-204ENST00000471245 ADCY7P51828 1080 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 CASP5P51878 434 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 RRADP55042 308 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 HGFACQ04756 655 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 BTKQ06187 659 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 SNAPC2Q13487 334 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 NFYCQ13952 458 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 TCERG1LQ5VWI1 586 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 ZNF572Q7Z3I7 529 aaPredicted RBP6.85□□□□□ -1.31
CKS1B-204ENST00000471245 C1QL4Q86Z23 238 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 ACRBPQ8NEB7 543 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 DEPTORQ8TB45 409 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 CCDC138Q96M89 665 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 TBCBQ99426 244 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 MOCS1Q9NZB8 636 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 TRPM1Q7Z4N2 1603 aa6.85□□□□□ -1.31
CKS1B-204ENST00000471245 RHPN2P1A8MT19 583 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 MYO1FO00160 1098 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 CREB3O43889 395 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 NUAK1O60285 661 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 PCSK1P29120 753 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 PIK3CBP42338 1070 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 AFF3P51826 1226 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms