RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 GNAI2P04899 355 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 HKR1P10072 659 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 EGR2P11161 476 aaPredicted RBP5.03□□□□□ -1.6
BRCA2-202ENST00000470094 LPOP22079 712 aaPredicted RBP5.03□□□□□ -1.6
BRCA2-202ENST00000470094 ZNF135P52742 658 aaPredicted RBP5.03□□□□□ -1.6
BRCA2-202ENST00000470094 POU6F2P78424 691 aaPredicted RBP5.03□□□□□ -1.6
BRCA2-202ENST00000470094 NKX6-1P78426 367 aaPredicted RBP5.03□□□□□ -1.6
BRCA2-202ENST00000470094 PLS1Q14651 629 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 KIF22Q14807 665 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 LRRC41Q15345 812 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 PREPLQ4J6C6 727 aaPredicted RBP5.03□□□□□ -1.6
BRCA2-202ENST00000470094 FAM102BQ5T8I3 360 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 HECTD2Q5U5R9 776 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 EPM2AIP1Q7L775 607 aaPredicted RBP5.03□□□□□ -1.6
BRCA2-202ENST00000470094 GPR149Q86SP6 731 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 PPP1R3BQ86XI6 285 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 BEND2Q8NDZ0 799 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 KLHDC4Q8TBB5 520 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 SLC35G2Q8TBE7 412 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 CAVIN3Q969G5 261 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 FUBP1Q96AE4 644 aaKnown RBP5.03□□□□□ -1.6
BRCA2-202ENST00000470094 TMEM125Q96AQ2 219 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 IKZF4Q9H2S9 585 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 UNKLQ9H9P5 680 aaKnown RBP5.03□□□□□ -1.6
BRCA2-202ENST00000470094 SARS2Q9NP81 518 aaKnown RBP5.03□□□□□ -1.6
BRCA2-202ENST00000470094 CASS4Q9NQ75 786 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 ANLNQ9NQW6 1124 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 PCDHA1Q9Y5I3 950 aa5.03□□□□□ -1.6
BRCA2-202ENST00000470094 PRAMEF33A0A0G2JMD5 474 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 E9PLN8 166 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 POLRMTO00411 1230 aaKnown RBP5.02□□□□□ -1.61
BRCA2-202ENST00000470094 PRAMEF10O60809 474 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 RHOBTB3O94955 611 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 ZFPL1O95159 310 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 GCP02774 474 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 RPS7P62081 194 aaKnown RBP5.02□□□□□ -1.61
BRCA2-202ENST00000470094 FPGSQ05932 587 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 SCAPQ12770 1279 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 SP5Q6BEB4 398 aaPredicted RBP5.02□□□□□ -1.61
BRCA2-202ENST00000470094 TAPT1Q6NXT6 567 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 B3GNT9Q6UX72 402 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 Q8NA96 180 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 NSUN7Q8NE18 718 aaKnown RBP5.02□□□□□ -1.61
BRCA2-202ENST00000470094 DDX17Q92841 729 aaKnown RBP5.02□□□□□ -1.61
BRCA2-202ENST00000470094 PTCD3Q96EY7 689 aaKnown RBP5.02□□□□□ -1.61
BRCA2-202ENST00000470094 COQ10AQ96MF6 247 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 TAAR9Q96RI9 348 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 TRIB1Q96RU8 372 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 ACO2Q99798 780 aaKnown RBP5.02□□□□□ -1.61
BRCA2-202ENST00000470094 VKORC1Q9BQB6 163 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 CNPPD1Q9BV87 410 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 TOR3AQ9H497 397 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 ARMT1Q9H993 441 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 GPR35Q9HC97 309 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 CNNM1Q9NRU3 951 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.02□□□□□ -1.61
BRCA2-202ENST00000470094 CTTNBP2NLQ9P2B4 639 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 PACSIN3Q9UKS6 424 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 DMTF1Q9Y222 760 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 COL4A3Q01955 1670 aa5.02□□□□□ -1.61
BRCA2-202ENST00000470094 PRSS29PA6NIE9 313 aa5.01□□□□□ -1.61
BRCA2-202ENST00000470094 UBXN7O94888 489 aa5.01□□□□□ -1.61
BRCA2-202ENST00000470094 SUN1O94901 812 aa5.01□□□□□ -1.61
BRCA2-202ENST00000470094 AHSGP02765 367 aa5.01□□□□□ -1.61
BRCA2-202ENST00000470094 TGM1P22735 817 aa5.01□□□□□ -1.61
BRCA2-202ENST00000470094 HTR1BP28222 390 aa5.01□□□□□ -1.61
BRCA2-202ENST00000470094 ANXA11P50995 505 aaKnown RBP5.01□□□□□ -1.61
BRCA2-202ENST00000470094 EXOSC9Q06265 439 aaKnown RBP5.01□□□□□ -1.61
BRCA2-202ENST00000470094 HABP2Q14520 560 aaPredicted RBP5.01□□□□□ -1.61
BRCA2-202ENST00000470094 MINDY4Q4G0A6 757 aa5.01□□□□□ -1.61
BRCA2-202ENST00000470094 CRB2Q5IJ48 1285 aa5.01□□□□□ -1.61
BRCA2-202ENST00000470094 NXNQ6DKJ4 435 aa5.01□□□□□ -1.61
BRCA2-202ENST00000470094 DAAM2Q86T65 1068 aa5.01□□□□□ -1.61
BRCA2-202ENST00000470094 TCEAL8Q8IYN2 117 aa5.01□□□□□ -1.61
BRCA2-202ENST00000470094 SLC44A3Q8N4M1 653 aa5.01□□□□□ -1.61
BRCA2-202ENST00000470094 LINC00476Q8WZB0 136 aa5.01□□□□□ -1.61
BRCA2-202ENST00000470094 Q96MF0 132 aa5.01□□□□□ -1.61
BRCA2-202ENST00000470094 TINAGL1Q9GZM7 467 aaPredicted RBP5.01□□□□□ -1.61
BRCA2-202ENST00000470094 INTS13Q9NVM9 706 aa5.01□□□□□ -1.61
BRCA2-202ENST00000470094 SYBUQ9NX95 663 aa5.01□□□□□ -1.61
BRCA2-202ENST00000470094 VSX1Q9NZR4 365 aaPredicted RBP5.01□□□□□ -1.61
BRCA2-202ENST00000470094 DMRT1Q9Y5R6 373 aa5.01□□□□□ -1.61
BRCA2-202ENST00000470094 E7ENX8 843 aa5□□□□□ -1.61
BRCA2-202ENST00000470094 TSPAN6O43657 245 aa5□□□□□ -1.61
BRCA2-202ENST00000470094 CTNND1O60716 968 aaKnown RBP5□□□□□ -1.61
BRCA2-202ENST00000470094 SEC24CP53992 1094 aa5□□□□□ -1.61
BRCA2-202ENST00000470094 RAB1AP62820 205 aa5□□□□□ -1.61
BRCA2-202ENST00000470094 MC2RQ01718 297 aa5□□□□□ -1.61
BRCA2-202ENST00000470094 TAP2Q03519 686 aa5□□□□□ -1.61
BRCA2-202ENST00000470094 MPP3Q13368 585 aa5□□□□□ -1.61
BRCA2-202ENST00000470094 DYRK1AQ13627 763 aa5□□□□□ -1.61
BRCA2-202ENST00000470094 FGL2Q14314 439 aa5□□□□□ -1.61
BRCA2-202ENST00000470094 CD300EQ496F6 205 aaPredicted RBP5□□□□□ -1.61
BRCA2-202ENST00000470094 KHDC1LQ5JSQ8 128 aa5□□□□□ -1.61
BRCA2-202ENST00000470094 EMC10Q5UCC4 262 aa5□□□□□ -1.61
BRCA2-202ENST00000470094 USP37Q86T82 979 aa5□□□□□ -1.61
BRCA2-202ENST00000470094 MAGEB6Q8N7X4 407 aa5□□□□□ -1.61
BRCA2-202ENST00000470094 ZBTB34Q8NCN2 500 aa5□□□□□ -1.61
BRCA2-202ENST00000470094 PPP1R35Q8TAP8 253 aa5□□□□□ -1.61
BRCA2-202ENST00000470094 SSH3Q8TE77 659 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms