RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 GRXCR1A8MXD5 290 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 RASA4BC9J798 803 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 ZNF185O15231 689 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 RASA4O43374 803 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 TBC1D4O60343 1298 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 GRPP07492 148 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 ZKSCAN1P17029 563 aaPredicted RBP5.07□□□□□ -1.6
VPS8-220ENST00000469713 RPL17P18621 184 aaKnown RBP5.07□□□□□ -1.6
VPS8-220ENST00000469713 HTR3AP46098 478 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 RPS16P62249 146 aaKnown RBP5.07□□□□□ -1.6
VPS8-220ENST00000469713 PLP2Q04941 152 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 SLC13A2Q13183 592 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 CTBP1Q13363 440 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 XRRA1Q6P2D8 792 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 RHOT2Q8IXI1 618 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 FAM186BQ8IYM0 893 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 SPICE1Q8N0Z3 855 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 OR56A1Q8NGH5 318 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 DDX17Q92841 729 aaKnown RBP5.07□□□□□ -1.6
VPS8-220ENST00000469713 CCDC138Q96M89 665 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 RIPOR3Q96MK2 946 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 ZSWIM1Q9BR11 485 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 TEX101Q9BY14 249 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 REXO4Q9GZR2 422 aaKnown RBP5.07□□□□□ -1.6
VPS8-220ENST00000469713 NLRC4Q9NPP4 1024 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 VSX1Q9NZR4 365 aaPredicted RBP5.07□□□□□ -1.6
VPS8-220ENST00000469713 HSFX1Q9UBD0 423 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 TAGLN3Q9UI15 199 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 SORCS3Q9UPU3 1222 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 TCAF1Q9Y4C2 921 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 DAAM1Q9Y4D1 1078 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 COMMD10Q9Y6G5 202 aa5.07□□□□□ -1.6
VPS8-220ENST00000469713 AATKQ6ZMQ8 1374 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 KRTAP23-1A1A580 65 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 TRIM43BA6NCK2 446 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 POM121BA6NF01 834 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 TMEM233B4DJY2 109 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 K7ESM1 405 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 FOXN3O00409 490 aaPredicted RBP5.06□□□□□ -1.6
VPS8-220ENST00000469713 NCK2O43639 380 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 CHEK2O96017 543 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 LDHAP00338 332 aaKnown RBP5.06□□□□□ -1.6
VPS8-220ENST00000469713 THP07101 528 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 PIM1P11309 404 aaPredicted RBP5.06□□□□□ -1.6
VPS8-220ENST00000469713 SLC11A2P49281 568 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 SELENOPP49908 381 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 UCP3P55916 312 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 DAG1Q14118 895 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 PDCD4Q53EL6 469 aaKnown RBP5.06□□□□□ -1.6
VPS8-220ENST00000469713 TOGARAM2Q6ZUX3 1019 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 SKAP1Q86WV1 359 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 MICU3Q86XE3 530 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 CFAP52Q8N1V2 620 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 SLC15A4Q8N697 577 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 DNAJC5GQ8N7S2 189 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 NSUN7Q8NE18 718 aaKnown RBP5.06□□□□□ -1.6
VPS8-220ENST00000469713 FAM46DQ8NEK8 389 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 CHST13Q8NET6 341 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 CXorf38Q8TB03 319 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 TRIM43Q96BQ3 446 aaPredicted RBP5.06□□□□□ -1.6
VPS8-220ENST00000469713 NMD3Q96D46 503 aaKnown RBP5.06□□□□□ -1.6
VPS8-220ENST00000469713 MSLNLQ96KJ4 702 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 SGCZQ96LD1 299 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 CNPPD1Q9BV87 410 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 UNKQ9C0B0 810 aaKnown RBP5.06□□□□□ -1.6
VPS8-220ENST00000469713 PNPLA8Q9NP80 782 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 ATP11BQ9Y2G3 1177 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 CHST2Q9Y4C5 530 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 PLEKHM1Q9Y4G2 1056 aa5.06□□□□□ -1.6
VPS8-220ENST00000469713 A0A087WWL8 130 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 A0A1B0GTW7 788 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 POLRMTO00411 1230 aaKnown RBP5.05□□□□□ -1.6
VPS8-220ENST00000469713 VPS4BO75351 444 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 SCAF4O95104 1147 aaKnown RBP5.05□□□□□ -1.6
VPS8-220ENST00000469713 IL18RAPO95256 599 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 TSHRP16473 764 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 FGFR4P22455 802 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 FDXRP22570 491 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 TNFSF4P23510 183 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 ACRV1P26436 265 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 STT3AP46977 705 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 CTSWP56202 376 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 HSD11B2P80365 405 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 TCF15Q12870 199 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 MORC3Q14149 939 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 KLHDC7AQ5VTJ3 777 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 FAM160B1Q5W0V3 765 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 LMBRD2Q68DH5 695 aaPredicted RBP5.05□□□□□ -1.6
VPS8-220ENST00000469713 TAPT1Q6NXT6 567 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.05□□□□□ -1.6
VPS8-220ENST00000469713 PPP1R32Q7Z5V6 425 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 DPP9Q86TI2 863 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 MPP5Q8N3R9 675 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 CCDC33Q8N5R6 958 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 OR2C3Q8N628 320 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 CPT1CQ8TCG5 803 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 C8orf49Q96NF6 230 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 DCLRE1CQ96SD1 692 aaKnown RBP5.05□□□□□ -1.6
VPS8-220ENST00000469713 PNKPQ96T60 521 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 ZNF518BQ9C0D4 1074 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms