RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 ADAM7Q9H2U9 754 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 RIC8AQ9NPQ8 531 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 ZSCAN32Q9NX65 697 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 KIF17Q9P2E2 1029 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 PDP2Q9P2J9 529 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 MED16Q9Y2X0 877 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 TMX2Q9Y320 296 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 VWA7Q9Y334 891 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 PAXBP1Q9Y5B6 917 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 PEG3Q9GZU2 1588 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 SOGA1O94964 1423 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 ZNF785A8K8V0 405 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 hCG_1984214I3L0E3 225 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 EYA2O00167 538 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 RNASEH2AO75792 299 aaKnown RBP4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 TOX4O94842 621 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 SASH1O94885 1247 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 KNG1P01042 644 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 GRPP07492 148 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 ATF2P15336 505 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 ATP5JP18859 108 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 GUCY1A2P33402 732 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 MRE11P49959 708 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 UCP3P55916 312 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 BPIFB4P59827 614 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 RAP2BP61225 183 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 POU6F2P78424 691 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 APBA1Q02410 837 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 SP140Q13342 867 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 PTK2BQ14289 1009 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 SLC29A2Q14542 456 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 PCOLCEQ15113 449 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 TOMM20Q15388 145 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 EMC10Q5UCC4 262 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 DCAF12L1Q5VU92 463 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 ZNF529Q6P280 563 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 BORAQ6PGQ7 559 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 MPZL3Q6UWV2 235 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 USP49Q70CQ1 688 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 UBE3BQ7Z3V4 1068 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 B3GNT8Q7Z7M8 397 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 MICU3Q86XE3 530 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 GATAD2AQ86YP4 633 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 C2CD5Q86YS7 1000 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 PLXDC1Q8IUK5 500 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 FTSJ3Q8IY81 847 aaKnown RBP4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 ESX1Q8N693 406 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 DCBLD1Q8N8Z6 715 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 GLIS1Q8NBF1 620 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 FAM71BQ8TC56 605 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 RAPGEF4Q8WZA2 1011 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 FAM168AQ92567 244 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 RPL10LQ96L21 214 aaKnown RBP4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 SNX27Q96L92 541 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 PYM1Q9BRP8 204 aaKnown RBP4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 MS4A7Q9GZW8 240 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 UNC45AQ9H3U1 944 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 L2HGDHQ9H9P8 463 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 SMURF2Q9HAU4 748 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 SEPSECSQ9HD40 501 aaKnown RBP4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 HEYLQ9NQ87 328 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 NRBP1Q9UHY1 535 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 MID2Q9UJV3 735 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 AFG3L2Q9Y4W6 797 aa4.31□□□□□ -1.72
HMGB1P25-201ENST00000468402 C2orf78A6NCI8 922 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 M0QYG6 137 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 FCHO1O14526 889 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 NRP1O14786 923 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 ZNF500O60304 480 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 USP1O94782 785 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 CHGBP05060 677 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 ITGA2BP08514 1039 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 TXNP10599 105 aaKnown RBP4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 RARBP10826 455 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 VEGFAP15692 232 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 KLRC1P26715 233 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 IL1R2P27930 398 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 IL13P35225 146 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 MLLT6P55198 1093 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 FOXO4P98177 505 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 ATP2C1P98194 919 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 FOXO1Q12778 655 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 KIF22Q14807 665 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 RTP5Q14D33 572 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 ACAP1Q15027 740 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 VPS53Q5VIR6 699 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 C4orf50Q6ZRC1 276 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 ZNF572Q7Z3I7 529 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 MOGAT3Q86VF5 341 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 LDHDQ86WU2 507 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 IRF2BP1Q8IU81 584 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 FAM9BQ8IZU0 186 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 TMTC2Q8N394 836 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 ANKRD53Q8N9V6 530 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 IL17RDQ8NFM7 739 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 NLGN4YQ8NFZ3 816 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 OR56A3Q8NH54 315 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 SMCR8Q8TEV9 937 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 AFG1LQ8WV93 481 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 SPSB4Q96A44 273 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms