RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 PSMC1P62191 440 aaKnown RBP4.8□□□□□ -1.64
VPS50-209ENST00000467326 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 CCDC157Q569K6 752 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 IFIT1BQ5T764 474 aaKnown RBP4.8□□□□□ -1.64
VPS50-209ENST00000467326 TAPT1Q6NXT6 567 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 FAM90A1Q86YD7 464 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 GRAMD1CQ8IYS0 662 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 CFAP52Q8N1V2 620 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 Q8NA96 180 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 SLC17A8Q8NDX2 589 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 SCAMP4Q969E2 229 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 HPS3Q969F9 1004 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 PTCD3Q96EY7 689 aaKnown RBP4.8□□□□□ -1.64
VPS50-209ENST00000467326 FAM167AQ96KS9 214 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 Q96MF0 132 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 VKORC1Q9BQB6 163 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 C1orf43Q9BWL3 253 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 RTFDC1Q9BY42 306 aaPredicted RBP4.8□□□□□ -1.64
VPS50-209ENST00000467326 SLC12A5Q9H2X9 1139 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 CTTNBP2NLQ9P2B4 639 aa4.8□□□□□ -1.64
VPS50-209ENST00000467326 PNMA8BQ9ULN7 279 aaPredicted RBP4.8□□□□□ -1.64
VPS50-209ENST00000467326 EPN1Q9Y6I3 576 aaPredicted RBP4.8□□□□□ -1.64
VPS50-209ENST00000467326 MAST3O60307 1309 aa4.79□□□□□ -1.64
VPS50-209ENST00000467326 TPD52L2O43399 206 aaKnown RBP4.79□□□□□ -1.64
VPS50-209ENST00000467326 ESRRBO95718 433 aa4.79□□□□□ -1.64
VPS50-209ENST00000467326 CHEK2O96017 543 aa4.79□□□□□ -1.64
VPS50-209ENST00000467326 LMNAP02545 664 aaKnown RBP4.79□□□□□ -1.64
VPS50-209ENST00000467326 RARBP10826 455 aa4.79□□□□□ -1.64
VPS50-209ENST00000467326 TYRP14679 529 aa4.79□□□□□ -1.64
VPS50-209ENST00000467326 IL12RB1P42701 662 aa4.79□□□□□ -1.64
VPS50-209ENST00000467326 ANXA11P50995 505 aaKnown RBP4.79□□□□□ -1.64
VPS50-209ENST00000467326 ZNF135P52742 658 aaPredicted RBP4.79□□□□□ -1.64
VPS50-209ENST00000467326 POU6F2P78424 691 aaPredicted RBP4.79□□□□□ -1.64
VPS50-209ENST00000467326 MC2RQ01718 297 aa4.79□□□□□ -1.64
VPS50-209ENST00000467326 FOXI1Q12951 378 aa4.79□□□□□ -1.64
VPS50-209ENST00000467326 ZNF267Q14586 743 aaPredicted RBP4.79□□□□□ -1.64
VPS50-209ENST00000467326 KIF22Q14807 665 aa4.79□□□□□ -1.64
VPS50-209ENST00000467326 Q6ZNX1 250 aa4.79□□□□□ -1.64
VPS50-209ENST00000467326 DNAJC10Q8IXB1 793 aa4.79□□□□□ -1.64
VPS50-209ENST00000467326 EXOC8Q8IYI6 725 aa4.79□□□□□ -1.64
VPS50-209ENST00000467326 JPH3Q8WXH2 748 aaPredicted RBP4.79□□□□□ -1.64
VPS50-209ENST00000467326 TNPO1Q92973 898 aaKnown RBP4.79□□□□□ -1.64
VPS50-209ENST00000467326 MTFMTQ96DP5 389 aaKnown RBP4.79□□□□□ -1.64
VPS50-209ENST00000467326 SMOQ99835 787 aa4.79□□□□□ -1.64
VPS50-209ENST00000467326 CNPPD1Q9BV87 410 aa4.79□□□□□ -1.64
VPS50-209ENST00000467326 CDH19Q9H159 772 aa4.79□□□□□ -1.64
VPS50-209ENST00000467326 NMRK2Q9NPI5 230 aa4.79□□□□□ -1.64
VPS50-209ENST00000467326 KCTD5Q9NXV2 234 aa4.79□□□□□ -1.64
VPS50-209ENST00000467326 VSX1Q9NZR4 365 aaPredicted RBP4.79□□□□□ -1.64
VPS50-209ENST00000467326 DMTF1Q9Y222 760 aa4.79□□□□□ -1.64
VPS50-209ENST00000467326 NR2E3Q9Y5X4 410 aa4.79□□□□□ -1.64
VPS50-209ENST00000467326 COL4A3Q01955 1670 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 POLRMTO00411 1230 aaKnown RBP4.78□□□□□ -1.64
VPS50-209ENST00000467326 SUN1O94901 812 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 MATN4O95460 622 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 S100BP04271 92 aaPredicted RBP4.78□□□□□ -1.64
VPS50-209ENST00000467326 GNAI2P04899 355 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 RPS7P62081 194 aaKnown RBP4.78□□□□□ -1.64
VPS50-209ENST00000467326 PLEKHG6Q3KR16 790 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 ATAT1Q5SQI0 421 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 SP5Q6BEB4 398 aaPredicted RBP4.78□□□□□ -1.64
VPS50-209ENST00000467326 ADGRG5Q8IZF4 528 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 SH2D3CQ8N5H7 860 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 NSUN7Q8NE18 718 aaKnown RBP4.78□□□□□ -1.64
VPS50-209ENST00000467326 GPR150Q8NGU9 434 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 BRIX1Q8TDN6 353 aaKnown RBP4.78□□□□□ -1.64
VPS50-209ENST00000467326 SNX19Q92543 992 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 SLC9A6Q92581 669 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 SLC35A4Q96G79 324 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 AIFM3Q96NN9 605 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 CAMKK2Q96RR4 588 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 TRIB1Q96RU8 372 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 AIFM2Q9BRQ8 373 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 TINAGL1Q9GZM7 467 aaPredicted RBP4.78□□□□□ -1.64
VPS50-209ENST00000467326 GPR35Q9HC97 309 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 INTS13Q9NVM9 706 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 ZIM2Q9NZV7 527 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 ZDHHC8Q9ULC8 765 aa4.78□□□□□ -1.64
VPS50-209ENST00000467326 HSPA6P17066 643 aa4.77□□□□□ -1.65
VPS50-209ENST00000467326 BMP5P22003 454 aa4.77□□□□□ -1.65
VPS50-209ENST00000467326 PHKA1P46020 1223 aa4.77□□□□□ -1.65
VPS50-209ENST00000467326 NANOS3P60323 173 aaKnown RBP4.77□□□□□ -1.65
VPS50-209ENST00000467326 MRPS35P82673 323 aaKnown RBP4.77□□□□□ -1.65
VPS50-209ENST00000467326 FPGSQ05932 587 aa4.77□□□□□ -1.65
VPS50-209ENST00000467326 SF3B3Q15393 1217 aaKnown RBP4.77□□□□□ -1.65
VPS50-209ENST00000467326 CD300EQ496F6 205 aaPredicted RBP4.77□□□□□ -1.65
VPS50-209ENST00000467326 PPP1R3BQ86XI6 285 aa4.77□□□□□ -1.65
VPS50-209ENST00000467326 LNX2Q8N448 690 aa4.77□□□□□ -1.65
VPS50-209ENST00000467326 CAMKK1Q8N5S9 505 aa4.77□□□□□ -1.65
VPS50-209ENST00000467326 ACTRT2Q8TDY3 377 aa4.77□□□□□ -1.65
VPS50-209ENST00000467326 DIS3LQ8TF46 1054 aaKnown RBP4.77□□□□□ -1.65
VPS50-209ENST00000467326 ZG16BQ96DA0 208 aa4.77□□□□□ -1.65
VPS50-209ENST00000467326 CDK5RAP3Q96JB5 506 aa4.77□□□□□ -1.65
VPS50-209ENST00000467326 LRGUKQ96M69 825 aa4.77□□□□□ -1.65
VPS50-209ENST00000467326 SIK2Q9H0K1 926 aa4.77□□□□□ -1.65
VPS50-209ENST00000467326 MRPL46Q9H2W6 279 aaKnown RBP4.77□□□□□ -1.65
VPS50-209ENST00000467326 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.77□□□□□ -1.65
VPS50-209ENST00000467326 PNPOQ9NVS9 261 aa4.77□□□□□ -1.65
VPS50-209ENST00000467326 STXBP5LQ9Y2K9 1186 aa4.77□□□□□ -1.65
VPS50-209ENST00000467326 THRAP3Q9Y2W1 955 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms