RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 LRRC41Q15345 812 aa5.42□□□□□ -1.54
SMC4-207ENST00000467263 CCDC93Q567U6 631 aa5.42□□□□□ -1.54
SMC4-207ENST00000467263 CCDC157Q569K6 752 aa5.42□□□□□ -1.54
SMC4-207ENST00000467263 FOXR2Q6PJQ5 311 aa5.42□□□□□ -1.54
SMC4-207ENST00000467263 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.42□□□□□ -1.54
SMC4-207ENST00000467263 ZNF365Q70YC5 407 aa5.42□□□□□ -1.54
SMC4-207ENST00000467263 TMIEQ8NEW7 156 aa5.42□□□□□ -1.54
SMC4-207ENST00000467263 JDP2Q8WYK2 163 aa5.42□□□□□ -1.54
SMC4-207ENST00000467263 HPS3Q969F9 1004 aa5.42□□□□□ -1.54
SMC4-207ENST00000467263 PNKPQ96T60 521 aa5.42□□□□□ -1.54
SMC4-207ENST00000467263 MAP3K14Q99558 947 aa5.42□□□□□ -1.54
SMC4-207ENST00000467263 SPATA5L1Q9BVQ7 753 aa5.42□□□□□ -1.54
SMC4-207ENST00000467263 C1orf43Q9BWL3 253 aa5.42□□□□□ -1.54
SMC4-207ENST00000467263 NOB1Q9ULX3 412 aaKnown RBP5.42□□□□□ -1.54
SMC4-207ENST00000467263 G3BP2Q9UN86 482 aaKnown RBP5.42□□□□□ -1.54
SMC4-207ENST00000467263 CDYLQ9Y232 598 aa5.42□□□□□ -1.54
SMC4-207ENST00000467263 MTO1Q9Y2Z2 717 aaKnown RBP5.42□□□□□ -1.54
SMC4-207ENST00000467263 NOX1Q9Y5S8 564 aa5.42□□□□□ -1.54
SMC4-207ENST00000467263 COL3A1P02461 1466 aaPredicted RBP5.42□□□□□ -1.54
SMC4-207ENST00000467263 RBMXL2O75526 392 aaKnown RBP5.41□□□□□ -1.54
SMC4-207ENST00000467263 OFD1O75665 1012 aa5.41□□□□□ -1.54
SMC4-207ENST00000467263 FOSP01100 380 aaPredicted RBP5.41□□□□□ -1.54
SMC4-207ENST00000467263 FDXRP22570 491 aa5.41□□□□□ -1.54
SMC4-207ENST00000467263 CYP2C19P33261 490 aa5.41□□□□□ -1.54
SMC4-207ENST00000467263 PHKA1P46020 1223 aa5.41□□□□□ -1.54
SMC4-207ENST00000467263 HK3P52790 923 aa5.41□□□□□ -1.54
SMC4-207ENST00000467263 KRTAP10-9P60411 292 aa5.41□□□□□ -1.54
SMC4-207ENST00000467263 CXADRP78310 365 aa5.41□□□□□ -1.54
SMC4-207ENST00000467263 MXRA7P84157 204 aa5.41□□□□□ -1.54
SMC4-207ENST00000467263 FOXF2Q12947 444 aa5.41□□□□□ -1.54
SMC4-207ENST00000467263 ERCC6LQ2NKX8 1250 aa5.41□□□□□ -1.54
SMC4-207ENST00000467263 SPDYE7PQ495Y7 208 aa5.41□□□□□ -1.54
SMC4-207ENST00000467263 ATAT1Q5SQI0 421 aa5.41□□□□□ -1.54
SMC4-207ENST00000467263 THEMIS2Q5TEJ8 643 aa5.41□□□□□ -1.54
SMC4-207ENST00000467263 HEATR3Q7Z4Q2 680 aa5.41□□□□□ -1.54
SMC4-207ENST00000467263 ARHGEF25Q86VW2 580 aa5.41□□□□□ -1.54
SMC4-207ENST00000467263 NACC2Q96BF6 587 aa5.41□□□□□ -1.54
SMC4-207ENST00000467263 KLHL32Q96NJ5 620 aa5.41□□□□□ -1.54
SMC4-207ENST00000467263 IMPG2Q9BZV3 1241 aa5.41□□□□□ -1.54
SMC4-207ENST00000467263 FOXJ2Q9P0K8 574 aa5.41□□□□□ -1.54
SMC4-207ENST00000467263 PNMA8BQ9ULN7 279 aaPredicted RBP5.41□□□□□ -1.54
SMC4-207ENST00000467263 SLC16A6O15403 523 aa5.4□□□□□ -1.54
SMC4-207ENST00000467263 ZFPL1O95159 310 aa5.4□□□□□ -1.54
SMC4-207ENST00000467263 ALDH2P05091 517 aa5.4□□□□□ -1.54
SMC4-207ENST00000467263 PRDX5P30044 214 aa5.4□□□□□ -1.54
SMC4-207ENST00000467263 ELLP55199 621 aaPredicted RBP5.4□□□□□ -1.54
SMC4-207ENST00000467263 PSMC1P62191 440 aaKnown RBP5.4□□□□□ -1.54
SMC4-207ENST00000467263 Q6ZNX1 250 aa5.4□□□□□ -1.54
SMC4-207ENST00000467263 SLC17A8Q8NDX2 589 aa5.4□□□□□ -1.54
SMC4-207ENST00000467263 NSUN7Q8NE18 718 aaKnown RBP5.4□□□□□ -1.54
SMC4-207ENST00000467263 ZNF384Q8TF68 577 aa5.4□□□□□ -1.54
SMC4-207ENST00000467263 DUSP26Q9BV47 211 aa5.4□□□□□ -1.54
SMC4-207ENST00000467263 SLC12A5Q9H2X9 1139 aa5.4□□□□□ -1.54
SMC4-207ENST00000467263 KIAA1586Q9HCI6 787 aa5.4□□□□□ -1.54
SMC4-207ENST00000467263 KMT5AQ9NQR1 393 aa5.4□□□□□ -1.54
SMC4-207ENST00000467263 LMBRD1Q9NUN5 540 aa5.4□□□□□ -1.54
SMC4-207ENST00000467263 VSX1Q9NZR4 365 aaPredicted RBP5.4□□□□□ -1.54
SMC4-207ENST00000467263 FEZ2Q9UHY8 353 aaPredicted RBP5.4□□□□□ -1.54
SMC4-207ENST00000467263 KCNE5Q9UJ90 142 aa5.4□□□□□ -1.54
SMC4-207ENST00000467263 NR2E3Q9Y5X4 410 aa5.4□□□□□ -1.54
SMC4-207ENST00000467263 EID1Q9Y6B2 187 aa5.4□□□□□ -1.54
SMC4-207ENST00000467263 MYADML2A6NDP7 307 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 H3BUI4 141 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 PPM1GO15355 546 aaPredicted RBP5.39□□□□□ -1.55
SMC4-207ENST00000467263 PRPF3O43395 683 aaKnown RBP5.39□□□□□ -1.55
SMC4-207ENST00000467263 ARIH2O95376 493 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 SCGB1D2O95969 90 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 ERBB2P04626 1255 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 GNAI3P08754 354 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 CDK4P11802 303 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 PIK3CGP48736 1102 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 RARRES1P49788 294 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 GNAI1P63096 354 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 BLOC1S1P78537 153 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 PPP2R5AQ15172 486 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 PPP1R3BQ86XI6 285 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 CAMKK1Q8N5S9 505 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 AOPEPQ8N6M6 819 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 PDPRQ8NCN5 879 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 CAGE1Q8TC20 777 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 DIS3LQ8TF46 1054 aaKnown RBP5.39□□□□□ -1.55
SMC4-207ENST00000467263 TNPO1Q92973 898 aaKnown RBP5.39□□□□□ -1.55
SMC4-207ENST00000467263 BRD9Q9H8M2 597 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 NMRK2Q9NPI5 230 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 ANLNQ9NQW6 1124 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 SEMA4GQ9NTN9 838 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 GNL3LQ9NVN8 582 aaKnown RBP5.39□□□□□ -1.55
SMC4-207ENST00000467263 SIDT1Q9NXL6 827 aaKnown RBP5.39□□□□□ -1.55
SMC4-207ENST00000467263 PCDHA1Q9Y5I3 950 aa5.39□□□□□ -1.55
SMC4-207ENST00000467263 PRSS29PA6NIE9 313 aa5.38□□□□□ -1.55
SMC4-207ENST00000467263 ZNF785A8K8V0 405 aa5.38□□□□□ -1.55
SMC4-207ENST00000467263 KRTAP29-1A8MX34 341 aaPredicted RBP5.38□□□□□ -1.55
SMC4-207ENST00000467263 RFPL1O75677 317 aa5.38□□□□□ -1.55
SMC4-207ENST00000467263 C1RP00736 705 aa5.38□□□□□ -1.55
SMC4-207ENST00000467263 GJB1P08034 283 aa5.38□□□□□ -1.55
SMC4-207ENST00000467263 MYBP10242 640 aa5.38□□□□□ -1.55
SMC4-207ENST00000467263 TYRP14679 529 aa5.38□□□□□ -1.55
SMC4-207ENST00000467263 HSPA6P17066 643 aa5.38□□□□□ -1.55
SMC4-207ENST00000467263 NFE2Q16621 373 aaPredicted RBP5.38□□□□□ -1.55
SMC4-207ENST00000467263 CYP2A13Q16696 494 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms