RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 ITGA8P53708 1063 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 EPHB4P54760 987 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 CLRN1P58418 232 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 ICA1Q05084 483 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 BLMHQ13867 455 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 HABP2Q14520 560 aaPredicted RBP4.93□□□□□ -1.62
VPS13A-209ENST00000467124 KRT72Q14CN4 511 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 CSRP2Q16527 193 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 DACT2Q5SW24 774 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 LMBRD2Q68DH5 695 aaPredicted RBP4.93□□□□□ -1.62
VPS13A-209ENST00000467124 ZDHHC24Q6UX98 284 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 ZNF365Q70YC5 407 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 FRMD5Q7Z6J6 570 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 USP37Q86T82 979 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 PAF1Q8N7H5 531 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 MB21D1Q8N884 522 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 FAM46DQ8NEK8 389 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 TFAP2CQ92754 450 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 NMD3Q96D46 503 aaKnown RBP4.93□□□□□ -1.62
VPS13A-209ENST00000467124 BORCS6Q96GS4 357 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 TMEM41AQ96HV5 264 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 LSM14BQ9BX40 385 aaKnown RBP4.93□□□□□ -1.62
VPS13A-209ENST00000467124 TINAGL1Q9GZM7 467 aaPredicted RBP4.93□□□□□ -1.62
VPS13A-209ENST00000467124 MS4A7Q9GZW8 240 aaPredicted RBP4.93□□□□□ -1.62
VPS13A-209ENST00000467124 CHST8Q9H2A9 424 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 NELFAQ9H3P2 528 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 SIDT1Q9NXL6 827 aaKnown RBP4.93□□□□□ -1.62
VPS13A-209ENST00000467124 SAGE1Q9NXZ1 904 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 ZDHHC8Q9ULC8 765 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 PADI4Q9UM07 663 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 HDAC5Q9UQL6 1122 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 MED16Q9Y2X0 877 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 DGKBQ9Y6T7 804 aa4.93□□□□□ -1.62
VPS13A-209ENST00000467124 FAM234BA2RU67 622 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 LGALS16A8MUM7 142 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 E9PLN8 166 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 RAB27BO00194 218 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 TRIM38O00635 465 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 FFAR2O15552 330 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 PJA2O43164 708 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 HAUS5O94927 633 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 CNOT4O95628 575 aaKnown RBP4.92□□□□□ -1.62
VPS13A-209ENST00000467124 POMCP01189 267 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 CSTBP04080 98 aaKnown RBP4.92□□□□□ -1.62
VPS13A-209ENST00000467124 ANXA2P07355 339 aaKnown RBP4.92□□□□□ -1.62
VPS13A-209ENST00000467124 SNRPA1P09661 255 aaKnown RBP4.92□□□□□ -1.62
VPS13A-209ENST00000467124 RPS19P39019 145 aaKnown RBP4.92□□□□□ -1.62
VPS13A-209ENST00000467124 PTTG1IPP53801 180 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 GALNT1Q10472 559 aaPredicted RBP4.92□□□□□ -1.62
VPS13A-209ENST00000467124 RAB32Q13637 225 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 UBXN2BQ14CS0 331 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 TAF5Q15542 800 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 ATXN7L2Q5T6C5 722 aaPredicted RBP4.92□□□□□ -1.62
VPS13A-209ENST00000467124 EMC10Q5UCC4 262 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 MFSD5Q6N075 450 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 PGBD2Q6P3X8 592 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 FBXO38Q6PIJ6 1188 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 SLC30A10Q6XR72 485 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 ARHGEF18Q6ZSZ5 1173 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 RNF44Q7L0R7 432 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 SUGP1Q8IWZ8 645 aaKnown RBP4.92□□□□□ -1.62
VPS13A-209ENST00000467124 ELOA2Q8IYF1 753 aaPredicted RBP4.92□□□□□ -1.62
VPS13A-209ENST00000467124 BRI3BPQ8WY22 251 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 NEIL1Q96FI4 390 aaPredicted RBP4.92□□□□□ -1.62
VPS13A-209ENST00000467124 MSLNLQ96KJ4 702 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 ZNF512Q96ME7 567 aaPredicted RBP4.92□□□□□ -1.62
VPS13A-209ENST00000467124 KLHL32Q96NJ5 620 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 GNRHR2Q96P88 292 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 VKORC1Q9BQB6 163 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 HEPHQ9BQS7 1158 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 CPPED1Q9BRF8 314 aaPredicted RBP4.92□□□□□ -1.62
VPS13A-209ENST00000467124 TLR10Q9BXR5 811 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 DPH1Q9BZG8 443 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 TTYH3Q9C0H2 523 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 MYLK2Q9H1R3 596 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 FAM30AQ9NZY2 134 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 JKAMPQ9P055 326 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 POGKQ9P215 609 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 MYO1AQ9UBC5 1043 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 ZNF212Q9UDV6 495 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 MID2Q9UJV3 735 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 CLCA2Q9UQC9 943 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 CDYLQ9Y232 598 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 TMX2Q9Y320 296 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 PAXBP1Q9Y5B6 917 aa4.92□□□□□ -1.62
VPS13A-209ENST00000467124 TBKBP1A7MCY6 615 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 MYO1CO00159 1063 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 PODXLO00592 558 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 PIP5K1BO14986 540 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 THAP12O43422 761 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 PLA2G6O60733 806 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 TNFRSF6BO95407 300 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 HK1P19367 917 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 GRK6P43250 576 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 MAPK9P45984 424 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 PFKFB4Q16877 469 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 TIGD6Q17RP2 521 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 SLC44A4Q53GD3 710 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 ARHGAP15Q53QZ3 475 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 NOMO2Q5JPE7 1267 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms