RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 HTRA4P83105 476 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 PIGFQ07326 219 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 ARL13BQ3SXY8 428 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 PRR16Q569H4 304 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 C3orf38Q5JPI3 329 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 FAM160B1Q5W0V3 765 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 SGMS1Q86VZ5 419 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 ZFPM1Q8IX07 1006 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 DNAJC5GQ8N7S2 189 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 SLC17A8Q8NDX2 589 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 OR10H5Q8NGA6 315 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 ATXN2LQ8WWM7 1075 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 MAML1Q92585 1016 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 FAM89AQ96GI7 184 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 KLHL32Q96NJ5 620 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 DCLRE1CQ96SD1 692 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 CNPPD1Q9BV87 410 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 TINAGL1Q9GZM7 467 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 VPS11Q9H270 941 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 MYO1AQ9UBC5 1043 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 TMX2Q9Y320 296 aa5.3□□□□□ -1.56
CDC42BPA-211ENST00000466538 OTOL1A6NHN0 477 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 PYCARD-AS1I3L0S3 204 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 GPR42O15529 346 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 THAP12O43422 761 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 NCK2O43639 380 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 UNC5CO95185 931 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 MT-ND5P03915 603 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 GRPP07492 148 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 PIM1P11309 404 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 FDXRP22570 491 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 SLC6A2P23975 617 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 PPM1AP35813 382 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 CHN2P52757 468 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 WNT3P56703 355 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 RPS16P62249 146 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 TNFAIP2Q03169 654 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 CRB2Q5IJ48 1285 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 SPTY2D1Q68D10 685 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 MAMDC4Q6UXC1 1216 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 SPOCD1Q6ZMY3 1216 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 PPP1R32Q7Z5V6 425 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 RHOT2Q8IXI1 618 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 CCDC33Q8N5R6 958 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 SLC15A4Q8N697 577 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 PCSK9Q8NBP7 692 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 RNF169Q8NCN4 708 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 TMIEQ8NEW7 156 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 IQCDQ96DY2 449 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 TMEM41AQ96HV5 264 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 SNX22Q96L94 193 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 TEPSINQ96N21 525 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 MED15Q96RN5 788 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 PNKPQ96T60 521 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 MNTQ99583 582 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 HERPUD2Q9BSE4 406 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 SPATA5L1Q9BVQ7 753 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 SSBP3Q9BWW4 388 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 IMPG2Q9BZV3 1241 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 ZCCHC4Q9H5U6 513 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 PTPRHQ9HD43 1115 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 PARD6AQ9NPB6 346 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 XPR1Q9UBH6 696 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 CEP83Q9Y592 693 aa5.29□□□□□ -1.56
CDC42BPA-211ENST00000466538 PATE3B3GLJ2 98 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 HNRNPDLO14979 420 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 ADAMTS3O15072 1205 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 ITGB1P05556 798 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 HK1P19367 917 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 FGFR2P21802 821 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 COMTP21964 271 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 KLRC1P26715 233 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 VIPR2P41587 438 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 TECP42680 631 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 RABGGTBP53611 331 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 HS1BP3Q53T59 392 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 NOMO2Q5JPE7 1267 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 METRNLQ641Q3 311 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 ERAP2Q6P179 960 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 PGBD2Q6P3X8 592 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 CATSPERGQ6ZRH7 1159 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 RNF44Q7L0R7 432 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 SKAP1Q86WV1 359 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 SYTL1Q8IYJ3 562 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 CFAP52Q8N1V2 620 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 VPS37AQ8NEZ2 397 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 DNERQ8NFT8 737 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 CHST8Q9H2A9 424 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 XPNPEP3Q9NQH7 507 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 ZSCAN32Q9NX65 697 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 GPRC5BQ9NZH0 403 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 AGAP1Q9UPQ3 857 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 NEU2Q9Y3R4 380 aa5.28□□□□□ -1.56
CDC42BPA-211ENST00000466538 XDHP47989 1333 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 ADAMTS20P59510 1910 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 CLCA1A8K7I4 914 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 CAPN14A8MX76 684 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 E9PLN8 166 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 M0QYG6 137 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 PLA2G6O60733 806 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms