RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 THADAQ6YHU6 1953 aa12.85□□□□□ -0.35
CNOT4-208ENST00000465721 PI4KAP42356 2102 aa12.85□□□□□ -0.35
CNOT4-208ENST00000465721 A0A1W2PRU2 124 aa12.85□□□□□ -0.35
CNOT4-208ENST00000465721 CCDC169A6NNP5 214 aa12.85□□□□□ -0.35
CNOT4-208ENST00000465721 SPECC1L-ADORA2AF8WAN1 911 aa12.85□□□□□ -0.35
CNOT4-208ENST00000465721 M0QZQ0 153 aa12.85□□□□□ -0.35
CNOT4-208ENST00000465721 HIP1RO75146 1068 aa12.85□□□□□ -0.35
CNOT4-208ENST00000465721 OR4Q2P0C623 313 aa12.85□□□□□ -0.35
CNOT4-208ENST00000465721 HARSP12081 509 aaKnown RBP12.85□□□□□ -0.35
CNOT4-208ENST00000465721 HOXA6P31267 233 aa12.85□□□□□ -0.35
CNOT4-208ENST00000465721 CCINQ13939 588 aa12.85□□□□□ -0.35
CNOT4-208ENST00000465721 NOLC1Q14978 699 aaKnown RBP eCLIP12.85□□□□□ -0.35
CNOT4-208ENST00000465721 SLC10A6Q3KNW5 377 aa12.85□□□□□ -0.35
CNOT4-208ENST00000465721 YAF2Q8IY57 180 aa12.85□□□□□ -0.35
CNOT4-208ENST00000465721 ZBTB45Q96K62 511 aaPredicted RBP12.85□□□□□ -0.35
CNOT4-208ENST00000465721 LRRC3BQ96PB8 259 aa12.85□□□□□ -0.35
CNOT4-208ENST00000465721 RUSC1Q9BVN2 902 aa12.85□□□□□ -0.35
CNOT4-208ENST00000465721 ASCC3Q8N3C0 2202 aaKnown RBP12.84□□□□□ -0.35
CNOT4-208ENST00000465721 FOXD2O60548 495 aaPredicted RBP12.84□□□□□ -0.35
CNOT4-208ENST00000465721 OAZ2O95190 189 aa12.84□□□□□ -0.35
CNOT4-208ENST00000465721 PMLP29590 882 aa12.84□□□□□ -0.35
CNOT4-208ENST00000465721 LRPAP1P30533 357 aa12.84□□□□□ -0.35
CNOT4-208ENST00000465721 AARSP49588 968 aaKnown RBP eCLIP12.84□□□□□ -0.35
CNOT4-208ENST00000465721 KPNA1P52294 538 aaPredicted RBP12.84□□□□□ -0.35
CNOT4-208ENST00000465721 LIMK1P53667 647 aa12.84□□□□□ -0.35
CNOT4-208ENST00000465721 YWHAHQ04917 246 aaPredicted RBP12.84□□□□□ -0.35
CNOT4-208ENST00000465721 PLD1Q13393 1074 aa12.84□□□□□ -0.35
CNOT4-208ENST00000465721 NBR1Q14596 966 aa12.84□□□□□ -0.35
CNOT4-208ENST00000465721 SEZ6Q53EL9 994 aa12.84□□□□□ -0.35
CNOT4-208ENST00000465721 DGKKQ5KSL6 1271 aa12.84□□□□□ -0.35
CNOT4-208ENST00000465721 TTC38Q5R3I4 469 aa12.84□□□□□ -0.35
CNOT4-208ENST00000465721 GAREM2Q75VX8 874 aa12.84□□□□□ -0.35
CNOT4-208ENST00000465721 WDR5BQ86VZ2 330 aa12.84□□□□□ -0.35
CNOT4-208ENST00000465721 RALGPS2Q86X27 583 aaPredicted RBP12.84□□□□□ -0.35
CNOT4-208ENST00000465721 TTC9BQ8N6N2 239 aa12.84□□□□□ -0.35
CNOT4-208ENST00000465721 C4orf32Q8N8J7 132 aa12.84□□□□□ -0.35
CNOT4-208ENST00000465721 SNX29Q8TEQ0 813 aa12.84□□□□□ -0.35
CNOT4-208ENST00000465721 ZFYVE19Q96K21 471 aa12.84□□□□□ -0.35
CNOT4-208ENST00000465721 PGLYRP2Q96PD5 576 aa12.84□□□□□ -0.35
CNOT4-208ENST00000465721 KMT5AQ9NQR1 393 aa12.84□□□□□ -0.35
CNOT4-208ENST00000465721 ANKFY1Q9P2R3 1169 aa12.84□□□□□ -0.35
CNOT4-208ENST00000465721 DSPP15924 2871 aaKnown RBP12.84□□□□□ -0.35
CNOT4-208ENST00000465721 FASNP49327 2511 aaKnown RBP12.83□□□□□ -0.36
CNOT4-208ENST00000465721 E9PMD0 336 aa12.83□□□□□ -0.36
CNOT4-208ENST00000465721 SLC16A4O15374 487 aa12.83□□□□□ -0.36
CNOT4-208ENST00000465721 TOM1L1O75674 476 aa12.83□□□□□ -0.36
CNOT4-208ENST00000465721 PRAMEF12O95522 483 aa12.83□□□□□ -0.36
CNOT4-208ENST00000465721 CXCL8P10145 99 aa12.83□□□□□ -0.36
CNOT4-208ENST00000465721 DUSP4Q13115 394 aa12.83□□□□□ -0.36
CNOT4-208ENST00000465721 PON2Q15165 354 aa12.83□□□□□ -0.36
CNOT4-208ENST00000465721 SAFBQ15424 915 aaKnown RBP eCLIP12.83□□□□□ -0.36
CNOT4-208ENST00000465721 SF3A2Q15428 464 aaKnown RBP12.83□□□□□ -0.36
CNOT4-208ENST00000465721 PKN3Q6P5Z2 889 aa12.83□□□□□ -0.36
CNOT4-208ENST00000465721 KCNK18Q7Z418 384 aa12.83□□□□□ -0.36
CNOT4-208ENST00000465721 GPIHBP1Q8IV16 184 aa12.83□□□□□ -0.36
CNOT4-208ENST00000465721 ARID3BQ8IVW6 561 aaPredicted RBP12.83□□□□□ -0.36
CNOT4-208ENST00000465721 IGSF22Q8N9C0 903 aa12.83□□□□□ -0.36
CNOT4-208ENST00000465721 DDX1Q92499 740 aaKnown RBP12.83□□□□□ -0.36
CNOT4-208ENST00000465721 DRC1Q96MC2 740 aa12.83□□□□□ -0.36
CNOT4-208ENST00000465721 TCHPQ9BT92 498 aa12.83□□□□□ -0.36
CNOT4-208ENST00000465721 FOXP1Q9H334 677 aaPredicted RBP12.83□□□□□ -0.36
CNOT4-208ENST00000465721 GTSE1Q9NYZ3 720 aa12.83□□□□□ -0.36
CNOT4-208ENST00000465721 LRWD1Q9UFC0 647 aa12.83□□□□□ -0.36
CNOT4-208ENST00000465721 RBM19Q9Y4C8 960 aaKnown RBP12.83□□□□□ -0.36
CNOT4-208ENST00000465721 TIMM13Q9Y5L4 95 aaPredicted RBP12.83□□□□□ -0.36
CNOT4-208ENST00000465721 TNRC6BQ9UPQ9 1833 aaKnown RBP12.83□□□□□ -0.36
CNOT4-208ENST00000465721 ANKRD11Q6UB99 2663 aaPredicted RBP12.83□□□□□ -0.36
CNOT4-208ENST00000465721 DMXL2Q8TDJ6 3036 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 TTC26A0AVF1 554 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 MTMR11A4FU01 709 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 PP2D1A8MPX8 630 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 TM4SF5O14894 197 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 EPN2O95208 641 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 EPHB3P54753 998 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 SPAG1Q07617 926 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 MCL1Q07820 350 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 TNK2Q07912 1038 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 GPR17Q13304 367 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 ARHGAP29Q52LW3 1261 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 CENPPQ6IPU0 288 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 RINT1Q6NUQ1 792 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 C1orf186Q6ZWK4 172 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 CEP68Q76N32 757 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 TTC8Q8TAM2 541 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 PSMG2Q969U7 264 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 C8orf76Q96K31 380 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 OXCT2Q9BYC2 517 aaPredicted RBP12.82□□□□□ -0.36
CNOT4-208ENST00000465721 HAPLN2Q9GZV7 340 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 C17orf75Q9HAS0 396 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 RXFP3Q9NSD7 469 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 OBP2AQ9NY56 170 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 ANGPTL2Q9UKU9 493 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 GON4LQ3T8J9 2241 aa12.82□□□□□ -0.36
CNOT4-208ENST00000465721 CACNA1EQ15878 2313 aa12.81□□□□□ -0.36
CNOT4-208ENST00000465721 OR6C75A6NL08 312 aa12.81□□□□□ -0.36
CNOT4-208ENST00000465721 PPEF2O14830 753 aa12.81□□□□□ -0.36
CNOT4-208ENST00000465721 EXTL3O43909 919 aa12.81□□□□□ -0.36
CNOT4-208ENST00000465721 SOAT2O75908 522 aa12.81□□□□□ -0.36
CNOT4-208ENST00000465721 GUCY2CP25092 1073 aa12.81□□□□□ -0.36
CNOT4-208ENST00000465721 MARCKSP29966 332 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms