RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 DNAJC7Q99615 494 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 BCO2Q9BYV7 579 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 PRO3102Q9H379 93 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.43■□□□□ 0.54
PTPRU-206ENST00000465525 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.43■□□□□ 0.54
PTPRU-206ENST00000465525 SKILP12757 684 aa18.43■□□□□ 0.54
PTPRU-206ENST00000465525 ACO1P21399 889 aaKnown RBP18.43■□□□□ 0.54
PTPRU-206ENST00000465525 TBXAS1P24557 533 aaPredicted RBP18.43■□□□□ 0.54
PTPRU-206ENST00000465525 SOX5P35711 763 aa18.43■□□□□ 0.54
PTPRU-206ENST00000465525 ORC1Q13415 861 aa18.43■□□□□ 0.54
PTPRU-206ENST00000465525 SHC3Q92529 594 aa18.43■□□□□ 0.54
PTPRU-206ENST00000465525 ACP6Q9NPH0 428 aa18.43■□□□□ 0.54
PTPRU-206ENST00000465525 PCDHB4Q9Y5E5 795 aa18.43■□□□□ 0.54
PTPRU-206ENST00000465525 GBF1Q92538 1859 aa18.43■□□□□ 0.54
PTPRU-206ENST00000465525 TSC2P49815 1807 aa18.43■□□□□ 0.54
PTPRU-206ENST00000465525 NRP1O14786 923 aa18.42■□□□□ 0.54
PTPRU-206ENST00000465525 P4HA1P13674 534 aa18.42■□□□□ 0.54
PTPRU-206ENST00000465525 STAT1P42224 750 aa18.42■□□□□ 0.54
PTPRU-206ENST00000465525 BCAR1P56945 870 aa18.42■□□□□ 0.54
PTPRU-206ENST00000465525 ASIC2Q16515 512 aa18.42■□□□□ 0.54
PTPRU-206ENST00000465525 TIGD5Q53EQ6 642 aa18.42■□□□□ 0.54
PTPRU-206ENST00000465525 SPOUT1Q5T280 376 aaKnown RBP18.42■□□□□ 0.54
PTPRU-206ENST00000465525 WDR59Q6PJI9 974 aa18.42■□□□□ 0.54
PTPRU-206ENST00000465525 DCLRE1AQ6PJP8 1040 aa18.42■□□□□ 0.54
PTPRU-206ENST00000465525 LRRC8AQ8IWT6 810 aa18.42■□□□□ 0.54
PTPRU-206ENST00000465525 MRPL45Q9BRJ2 306 aaKnown RBP18.42■□□□□ 0.54
PTPRU-206ENST00000465525 CWH43Q9H720 699 aa18.42■□□□□ 0.54
PTPRU-206ENST00000465525 CISHQ9NSE2 258 aa18.42■□□□□ 0.54
PTPRU-206ENST00000465525 HMGXB4Q9UGU5 601 aa18.42■□□□□ 0.54
PTPRU-206ENST00000465525 CYB561D2O14569 222 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 CYP26A1O43174 497 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 PLEKP08567 350 aaPredicted RBP18.41■□□□□ 0.54
PTPRU-206ENST00000465525 SOWAHAQ2M3V2 549 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 ZNF394Q53GI3 561 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 TMEM270Q6UE05 265 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 DSTYKQ6XUX3 929 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 ENOSF1Q7L5Y1 443 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 UBR7Q8N806 425 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 SENP8Q96LD8 212 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 PANX2Q96RD6 677 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 KCNF1Q9H3M0 494 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 GDAP2Q9NXN4 497 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 L1RE1Q9UN81 338 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 TIMM13Q9Y5L4 95 aaPredicted RBP18.41■□□□□ 0.54
PTPRU-206ENST00000465525 MRPL42Q9Y6G3 142 aaKnown RBP18.41■□□□□ 0.54
PTPRU-206ENST00000465525 GRXCR1A8MXD5 290 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 HCRTO43612 131 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 ALDH2P05091 517 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 TSR1Q2NL82 804 aaKnown RBP18.41■□□□□ 0.54
PTPRU-206ENST00000465525 FAM109BQ6ICB4 259 aaPredicted RBP18.41■□□□□ 0.54
PTPRU-206ENST00000465525 TMEM173Q86WV6 379 aaPredicted RBP18.41■□□□□ 0.54
PTPRU-206ENST00000465525 FAM71AQ8IYT1 594 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 FIBCD1Q8N539 461 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 SP7Q8TDD2 431 aaPredicted RBP18.41■□□□□ 0.54
PTPRU-206ENST00000465525 BCL7CQ8WUZ0 217 aaPredicted RBP18.41■□□□□ 0.54
PTPRU-206ENST00000465525 CHP1Q99653 195 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 TMEM175Q9BSA9 504 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 FAN1Q9Y2M0 1017 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 DAAM1Q9Y4D1 1078 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 PCDHA11Q9Y5I1 949 aa18.41■□□□□ 0.54
PTPRU-206ENST00000465525 RANBP2P49792 3224 aaKnown RBP18.4■□□□□ 0.54
PTPRU-206ENST00000465525 HUS1O60921 280 aa18.4■□□□□ 0.54
PTPRU-206ENST00000465525 GALTP07902 379 aa18.4■□□□□ 0.54
PTPRU-206ENST00000465525 RABGGTBP53611 331 aa18.4■□□□□ 0.54
PTPRU-206ENST00000465525 WSCD1Q658N2 575 aa18.4■□□□□ 0.54
PTPRU-206ENST00000465525 IRF2BP2Q7Z5L9 587 aa18.4■□□□□ 0.54
PTPRU-206ENST00000465525 RBBP8NLQ8NC74 664 aaPredicted RBP18.4■□□□□ 0.54
PTPRU-206ENST00000465525 APPL2Q8NEU8 664 aa18.4■□□□□ 0.54
PTPRU-206ENST00000465525 FAM81BQ96LP2 452 aa18.4■□□□□ 0.54
PTPRU-206ENST00000465525 ZNHIT6Q9NWK9 470 aaKnown RBP18.4■□□□□ 0.54
PTPRU-206ENST00000465525 MARCH5Q9NX47 278 aa18.4■□□□□ 0.54
PTPRU-206ENST00000465525 AIPL1Q9NZN9 384 aa18.4■□□□□ 0.54
PTPRU-206ENST00000465525 MYO6Q9UM54 1294 aa18.4■□□□□ 0.54
PTPRU-206ENST00000465525 VWA8A3KMH1 1905 aa18.4■□□□□ 0.54
PTPRU-206ENST00000465525 FAM170AA1A519 330 aa18.39■□□□□ 0.53
PTPRU-206ENST00000465525 CARNS1A5YM72 827 aa18.39■□□□□ 0.53
PTPRU-206ENST00000465525 TADA2AO75478 443 aa18.39■□□□□ 0.53
PTPRU-206ENST00000465525 CLCN1P35523 988 aa18.39■□□□□ 0.53
PTPRU-206ENST00000465525 SLC47A2Q86VL8 602 aa18.39■□□□□ 0.53
PTPRU-206ENST00000465525 TMEM139Q8IV31 216 aa18.39■□□□□ 0.53
PTPRU-206ENST00000465525 ADGRF2Q8IZF7 708 aa18.39■□□□□ 0.53
PTPRU-206ENST00000465525 PDCL2Q8N4E4 241 aa18.39■□□□□ 0.53
PTPRU-206ENST00000465525 KBTBD7Q8WVZ9 684 aa18.39■□□□□ 0.53
PTPRU-206ENST00000465525 TWNKQ96RR1 684 aa18.39■□□□□ 0.53
PTPRU-206ENST00000465525 BAG1Q99933 345 aaPredicted RBP18.39■□□□□ 0.53
PTPRU-206ENST00000465525 NUCKS1Q9H1E3 243 aaKnown RBP18.39■□□□□ 0.53
PTPRU-206ENST00000465525 CYP3A43Q9HB55 503 aa18.39■□□□□ 0.53
PTPRU-206ENST00000465525 NME7Q9Y5B8 376 aa18.39■□□□□ 0.53
PTPRU-206ENST00000465525 LAMA2P24043 3122 aaKnown RBP18.39■□□□□ 0.53
PTPRU-206ENST00000465525 NLRC5Q86WI3 1866 aa18.39■□□□□ 0.53
PTPRU-206ENST00000465525 A0A1W2PPC1 479 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 LCHNA4D1U4 455 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 FERP16591 822 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 SSTR3P32745 418 aaPredicted RBP18.38■□□□□ 0.53
PTPRU-206ENST00000465525 ALDH7A1P49419 539 aaKnown RBP18.38■□□□□ 0.53
PTPRU-206ENST00000465525 AARSP49588 968 aaKnown RBP eCLIP18.38■□□□□ 0.53
PTPRU-206ENST00000465525 NDST1P52848 882 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 CCZ1BP86790 482 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 CCZ1P86791 482 aaPredicted RBP18.38■□□□□ 0.53
PTPRU-206ENST00000465525 KLHL30Q0D2K2 578 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms