RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 ALG6Q9Y672 507 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 MROH7Q68CQ1 1323 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 FKTNO75072 461 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 ZMYND10O75800 440 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 NPTXRO95502 500 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 ASPAP45381 313 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 NSFP46459 744 aaKnown RBP15.44■□□□□ 0.06
HDAC6-213ENST00000462730 MRPS25P82663 173 aaKnown RBP15.44■□□□□ 0.06
HDAC6-213ENST00000462730 CENPCQ03188 943 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 PCBP1Q15365 356 aaKnown RBP eCLIP15.44■□□□□ 0.06
HDAC6-213ENST00000462730 DCAF4L1Q3SXM0 396 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 CCSAPQ6IQ19 270 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-213ENST00000462730 C8orf74Q6P047 294 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 TRIM11Q96F44 468 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 BTBD6Q96KE9 485 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 ACAP3Q96P50 834 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 CWC15Q9P013 229 aaKnown RBP15.44■□□□□ 0.06
HDAC6-213ENST00000462730 NXF1Q9UBU9 619 aaKnown RBP15.44■□□□□ 0.06
HDAC6-213ENST00000462730 ITGB3P05106 788 aa15.43■□□□□ 0.06
HDAC6-213ENST00000462730 WEE2P0C1S8 567 aa15.43■□□□□ 0.06
HDAC6-213ENST00000462730 MYBL1P10243 752 aa15.43■□□□□ 0.06
HDAC6-213ENST00000462730 TMEM132DQ14C87 1099 aa15.43■□□□□ 0.06
HDAC6-213ENST00000462730 ZSCAN26Q16670 478 aa15.43■□□□□ 0.06
HDAC6-213ENST00000462730 NOTUMQ6P988 496 aa15.43■□□□□ 0.06
HDAC6-213ENST00000462730 NME8Q8N427 588 aa15.43■□□□□ 0.06
HDAC6-213ENST00000462730 RASGEF1CQ8N431 466 aa15.43■□□□□ 0.06
HDAC6-213ENST00000462730 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.43■□□□□ 0.065e-7■■■□□ 15.3
HDAC6-213ENST00000462730 RALGAPA2Q2PPJ7 1873 aa15.43■□□□□ 0.06
HDAC6-213ENST00000462730 CITO14578 2027 aa15.43■□□□□ 0.06
HDAC6-213ENST00000462730 FRMPD3Q5JV73 1810 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 INHAP05111 366 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 COMTP21964 271 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 GRM5P41594 1212 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 CRYBB1P53674 252 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-213ENST00000462730 YWHAEP62258 255 aaKnown RBP15.42■□□□□ 0.06
HDAC6-213ENST00000462730 TNNC1P63316 161 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 NOMO3P69849 1222 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 ZNF667Q5HYK9 610 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 DCAF12L1Q5VU92 463 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 SLC27A1Q6PCB7 646 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 APBB1IPQ7Z5R6 666 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-213ENST00000462730 HDAC7Q8WUI4 952 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 KRT12Q99456 494 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 AVENQ9NQS1 362 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-213ENST00000462730 SAGE1Q9NXZ1 904 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 MIF4GDA9UHW6 222 aaKnown RBP15.42■□□□□ 0.06
HDAC6-213ENST00000462730 BRD2P25440 801 aaKnown RBP15.42■□□□□ 0.06
HDAC6-213ENST00000462730 RAP1GAPP47736 663 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 LMAN1P49257 510 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 GUCY2FP51841 1108 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 SLC7A5Q01650 507 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 ZNF394Q53GI3 561 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 MON1BQ7L1V2 547 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 PHLDB2Q86SQ0 1253 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 PCSK9Q8NBP7 692 aaKnown RBP15.42■□□□□ 0.06
HDAC6-213ENST00000462730 ZNF606Q8WXB4 792 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 WNT8BQ93098 351 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 RPS6KC1Q96S38 1066 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 C11orf70Q9BRQ4 267 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 EIF2AQ9BY44 585 aaKnown RBP15.42■□□□□ 0.06
HDAC6-213ENST00000462730 VPS18Q9P253 973 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 TMEM59LQ9UK28 342 aa15.42■□□□□ 0.06
HDAC6-213ENST00000462730 PIN4Q9Y237 131 aaKnown RBP15.42■□□□□ 0.06
HDAC6-213ENST00000462730 RRM1P23921 792 aa15.41■□□□□ 0.06
HDAC6-213ENST00000462730 POLR2BP30876 1174 aaKnown RBP15.41■□□□□ 0.06
HDAC6-213ENST00000462730 GLE1Q53GS7 698 aaKnown RBP15.41■□□□□ 0.06
HDAC6-213ENST00000462730 C2CD6Q53TS8 623 aa15.41■□□□□ 0.06
HDAC6-213ENST00000462730 LIN9Q5TKA1 542 aa15.41■□□□□ 0.06
HDAC6-213ENST00000462730 RNF180Q86T96 592 aa15.41■□□□□ 0.06
HDAC6-213ENST00000462730 CPNE8Q86YQ8 564 aa15.41■□□□□ 0.06
HDAC6-213ENST00000462730 UBL4BQ8N7F7 174 aa15.41■□□□□ 0.06
HDAC6-213ENST00000462730 SLAIN1Q8ND83 568 aa15.41■□□□□ 0.06
HDAC6-213ENST00000462730 CXorf38Q8TB03 319 aa15.41■□□□□ 0.06
HDAC6-213ENST00000462730 RUBCNQ92622 972 aa15.41■□□□□ 0.06
HDAC6-213ENST00000462730 ALG3Q92685 438 aa15.41■□□□□ 0.06
HDAC6-213ENST00000462730 KIF12Q96FN5 646 aa15.41■□□□□ 0.06
HDAC6-213ENST00000462730 HINFPQ9BQA5 517 aa15.41■□□□□ 0.06
HDAC6-213ENST00000462730 ZSWIM1Q9BR11 485 aa15.41■□□□□ 0.06
HDAC6-213ENST00000462730 DMGDHQ9UI17 866 aaKnown RBP15.41■□□□□ 0.06
HDAC6-213ENST00000462730 GRIN2DO15399 1336 aa15.41■□□□□ 0.06
HDAC6-213ENST00000462730 SPOPO43791 374 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 MARCKSL1P49006 195 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 MRPS6P82932 125 aaKnown RBP15.4■□□□□ 0.06
HDAC6-213ENST00000462730 CASP8Q14790 479 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 WDR72Q3MJ13 1102 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 LLGL2Q6P1M3 1020 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 SERINC5Q86VE9 423 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 SESTD1Q86VW0 696 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 KLHL7Q8IXQ5 586 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 GSPT2Q8IYD1 628 aaKnown RBP15.4■□□□□ 0.06
HDAC6-213ENST00000462730 KRT35Q92764 455 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 AP1M1Q9BXS5 423 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 BCO2Q9BYV7 579 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 CELF4Q9BZC1 486 aaKnown RBP15.4■□□□□ 0.06
HDAC6-213ENST00000462730 CARD9Q9H257 536 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 SMYD3Q9H7B4 428 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 SNTG2Q9NY99 539 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 ADAM22Q9P0K1 906 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 STIM2Q9P246 746 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 ANAPC7Q9UJX3 599 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms