RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 UVSSAQ2YD98 709 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 Q4G0T1 1027 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 RILPL1Q5EBL4 403 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 CLLU1OSQ5K130 101 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 TTC38Q5R3I4 469 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 ICE2Q659A1 982 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 PPP4R3AQ6IN85 833 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 MTHFD1LQ6UB35 978 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 ZNF852Q6ZMS4 543 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 BRAPQ7Z569 592 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 TMEM173Q86WV6 379 aaPredicted RBP6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 ECHDC2Q86YB7 292 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 GPT2Q8TD30 523 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 IGSF21Q96ID5 467 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 BBC3Q96PG8 261 aaPredicted RBP6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 TACO1Q9BSH4 297 aaKnown RBP6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 RHOBTB2Q9BYZ6 727 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 NIF3L1Q9GZT8 377 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 ARRDC1-AS1Q9H2J1 176 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 AGO4Q9HCK5 861 aaKnown RBP6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 JPH1Q9HDC5 661 aaPredicted RBP6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 MED4Q9NPJ6 270 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 MAN1C1Q9NR34 630 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 SPTLC3Q9NUV7 552 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 MRPS17Q9Y2R5 130 aaKnown RBP6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 TMA7Q9Y2S6 64 aaKnown RBP6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 SH3BP1Q9Y3L3 701 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 TICRRQ7Z2Z1 1910 aa6.58□□□□□ -1.36
SMARCC1-204ENST00000462198 NFASCO94856 1347 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 USP9XQ93008 2570 aaPredicted RBP6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 TLDC2A0PJX2 215 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 A6NJY4 79 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 PCNX2A6NKB5 2137 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 CHURC1-FNTBB4DL54 471 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 MSH4O15457 936 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 SLC37A4O43826 429 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 EDIL3O43854 480 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 NEMFO60524 1076 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 GAS7O60861 476 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 ZC3H11AO75152 810 aaKnown RBP eCLIP6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 SPATA31D3P0C874 917 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 KCNA2P16389 499 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 GUCY2CP25092 1073 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 KLRC1P26715 233 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 MZF1P28698 734 aaPredicted RBP6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 CXCL12P48061 93 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 FNTBP49356 437 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 CBX1P83916 185 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 ZNF252P-AS1Q0IIN9 211 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 ITGB3BPQ13352 177 aaPredicted RBP6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 CALCRLQ16602 461 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 COL28A1Q2UY09 1125 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 LRCH2Q5VUJ6 765 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 CAVIN1Q6NZI2 390 aaKnown RBP6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 ZNF662Q6ZS27 426 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 SPATA31D4Q6ZUB0 917 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 TPRG1Q6ZUI0 275 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 CEP68Q76N32 757 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 GET4Q7L5D6 327 aaPredicted RBP6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 FAM228AQ86W67 206 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 ATCAYQ86WG3 371 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 SLFN12Q8IYM2 578 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 KIAA0319LQ8IZA0 1049 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 GLIS3Q8NEA6 775 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 BCL7CQ8WUZ0 217 aaPredicted RBP6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 SLC5A5Q92911 643 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 LENG9Q96B70 501 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 ZNF707Q96C28 371 aaPredicted RBP6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 FAM20AQ96MK3 541 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 MBOAT7Q96N66 472 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 FRMD6Q96NE9 622 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 RIT2Q99578 217 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 PAIP2Q9BPZ3 127 aaKnown RBP6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 TEKT3Q9BXF9 490 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 NT5C3AQ9H0P0 336 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 RASSF4Q9H2L5 321 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 ZSCAN16Q9H4T2 348 aaPredicted RBP6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 CYLDQ9NQC7 956 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 TBC1D22BQ9NU19 505 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 SLC9A2Q9UBY0 812 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 DPP7Q9UHL4 492 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 MTMR6Q9Y217 621 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 AK5Q9Y6K8 562 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 ZFP37Q9Y6Q3 630 aaPredicted RBP6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 ARID2Q68CP9 1835 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 LOC400499M0QZD8 3231 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 MYH11P35749 1972 aa6.57□□□□□ -1.36
SMARCC1-204ENST00000462198 LAMA1P25391 3075 aa6.56□□□□□ -1.36
SMARCC1-204ENST00000462198 TBX3O15119 743 aa6.56□□□□□ -1.36
SMARCC1-204ENST00000462198 CHMP2AO43633 222 aa6.56□□□□□ -1.36
SMARCC1-204ENST00000462198 GALTP07902 379 aa6.56□□□□□ -1.36
SMARCC1-204ENST00000462198 ZSCAN22P10073 491 aaPredicted RBP6.56□□□□□ -1.36
SMARCC1-204ENST00000462198 FSHRP23945 695 aa6.56□□□□□ -1.36
SMARCC1-204ENST00000462198 VARSP26640 1264 aaKnown RBP6.56□□□□□ -1.36
SMARCC1-204ENST00000462198 TXKP42681 527 aa6.56□□□□□ -1.36
SMARCC1-204ENST00000462198 TOB1P50616 345 aaPredicted RBP6.56□□□□□ -1.36
SMARCC1-204ENST00000462198 CCR3P51677 355 aa6.56□□□□□ -1.36
SMARCC1-204ENST00000462198 CRYBB1P53674 252 aaPredicted RBP6.56□□□□□ -1.36
SMARCC1-204ENST00000462198 SMTNP53814 917 aa6.56□□□□□ -1.36
SMARCC1-204ENST00000462198 ACTR2P61160 394 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms