RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 MRPS17Q9Y2R5 130 aaKnown RBP15.97■□□□□ 0.15
SMPD4-216ENST00000461187 SDK1Q7Z5N4 2213 aa15.96■□□□□ 0.15
SMPD4-216ENST00000461187 TRAK2O60296 914 aa15.96■□□□□ 0.15
SMPD4-216ENST00000461187 TYMPP19971 482 aa15.96■□□□□ 0.15
SMPD4-216ENST00000461187 GDI1P31150 447 aa15.96■□□□□ 0.15
SMPD4-216ENST00000461187 LONP1P36776 959 aaKnown RBP15.96■□□□□ 0.15
SMPD4-216ENST00000461187 MCM2P49736 904 aa15.96■□□□□ 0.15
SMPD4-216ENST00000461187 LILRA4P59901 499 aa15.96■□□□□ 0.15
SMPD4-216ENST00000461187 GTF2BQ00403 316 aa15.96■□□□□ 0.15
SMPD4-216ENST00000461187 DUSP4Q13115 394 aa15.96■□□□□ 0.15
SMPD4-216ENST00000461187 OVOS1Q6IE37 1185 aa15.96■□□□□ 0.15
SMPD4-216ENST00000461187 JADE1Q6IE81 842 aa15.96■□□□□ 0.15
SMPD4-216ENST00000461187 USP37Q86T82 979 aa15.96■□□□□ 0.15
SMPD4-216ENST00000461187 TMC8Q8IU68 726 aa15.96■□□□□ 0.15
SMPD4-216ENST00000461187 DCLK2Q8N568 766 aa15.96■□□□□ 0.15
SMPD4-216ENST00000461187 ZSCAN18Q8TBC5 510 aaPredicted RBP15.96■□□□□ 0.15
SMPD4-216ENST00000461187 DEPDC1BQ8WUY9 529 aa15.96■□□□□ 0.15
SMPD4-216ENST00000461187 NELL1Q92832 810 aa15.96■□□□□ 0.15
SMPD4-216ENST00000461187 IRF7Q92985 503 aa15.96■□□□□ 0.15
SMPD4-216ENST00000461187 MSTO1Q9BUK6 570 aa15.96■□□□□ 0.15
SMPD4-216ENST00000461187 CPSF3Q9UKF6 684 aaKnown RBP15.96■□□□□ 0.15
SMPD4-216ENST00000461187 PCDHGA2Q9Y5H1 932 aa15.96■□□□□ 0.15
SMPD4-216ENST00000461187 EML5Q05BV3 1969 aa15.96■□□□□ 0.15
SMPD4-216ENST00000461187 MYO16Q9Y6X6 1858 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 MAN2B1O00754 1011 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 SPTLC1O15269 473 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 BMP15O95972 392 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 NMT1P30419 496 aaKnown RBP15.95■□□□□ 0.14
SMPD4-216ENST00000461187 MTAPQ13126 283 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 PLD1Q13393 1074 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 MYBPC2Q14324 1141 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 C9orf57Q5W0N0 161 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 CENPPQ6IPU0 288 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 BRAPQ7Z569 592 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 MFSD6LQ8IWD5 586 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 CD302Q8IX05 232 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 ZBTB44Q8NCP5 570 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 RMDN1Q96DB5 314 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 FAM212AQ96EL1 285 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 SENP8Q96LD8 212 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 TMEM209Q96SK2 561 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 HINFPQ9BQA5 517 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 GPR88Q9GZN0 384 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 ZHX3Q9H4I2 956 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 PRMT8Q9NR22 394 aaPredicted RBP15.95■□□□□ 0.14
SMPD4-216ENST00000461187 ZSCAN32Q9NX65 697 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 NDRG2Q9UN36 371 aaKnown RBP15.95■□□□□ 0.14
SMPD4-216ENST00000461187 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.95■□□□□ 0.14
SMPD4-216ENST00000461187 SPTBN2O15020 2390 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 PTPRDP23468 1912 aa15.95■□□□□ 0.14
SMPD4-216ENST00000461187 A0A1W2PRU2 124 aa15.94■□□□□ 0.14
SMPD4-216ENST00000461187 ANO9A1A5B4 782 aa15.94■□□□□ 0.14
SMPD4-216ENST00000461187 MTMR11A4FU01 709 aa15.94■□□□□ 0.14
SMPD4-216ENST00000461187 HEPACAM2A8MVW5 462 aa15.94■□□□□ 0.14
SMPD4-216ENST00000461187 ANKRD63C9JTQ0 380 aa15.94■□□□□ 0.14
SMPD4-216ENST00000461187 ARNTLO00327 626 aa15.94■□□□□ 0.14
SMPD4-216ENST00000461187 PIRO00625 290 aa15.94■□□□□ 0.14
SMPD4-216ENST00000461187 LILRB5O75023 590 aa15.94■□□□□ 0.14
SMPD4-216ENST00000461187 KRT18P05783 430 aaKnown RBP15.94■□□□□ 0.14
SMPD4-216ENST00000461187 NFICP08651 508 aa15.94■□□□□ 0.14
SMPD4-216ENST00000461187 EPHB3P54753 998 aa15.94■□□□□ 0.14
SMPD4-216ENST00000461187 SF3A1Q15459 793 aaKnown RBP15.94■□□□□ 0.14
SMPD4-216ENST00000461187 ZC2HC1CQ53FD0 456 aaPredicted RBP15.94■□□□□ 0.14
SMPD4-216ENST00000461187 TSSK4Q6SA08 328 aa15.94■□□□□ 0.14
SMPD4-216ENST00000461187 TTC9BQ8N6N2 239 aa15.94■□□□□ 0.14
SMPD4-216ENST00000461187 ATAD1Q8NBU5 361 aa15.94■□□□□ 0.14
SMPD4-216ENST00000461187 ATRIPQ8WXE1 791 aa15.94■□□□□ 0.14
SMPD4-216ENST00000461187 LARP4BQ92615 738 aaKnown RBP15.94■□□□□ 0.14
SMPD4-216ENST00000461187 RSPRY1Q96DX4 576 aa15.94■□□□□ 0.14
SMPD4-216ENST00000461187 CCSER1Q9C0I3 900 aa15.94■□□□□ 0.14
SMPD4-216ENST00000461187 CHRDQ9H2X0 955 aa15.94■□□□□ 0.14
SMPD4-216ENST00000461187 SLC27A5Q9Y2P5 690 aa15.94■□□□□ 0.14
SMPD4-216ENST00000461187 DERAQ9Y315 318 aa15.94■□□□□ 0.14
SMPD4-216ENST00000461187 HELZP42694 1942 aaKnown RBP15.94■□□□□ 0.14
SMPD4-216ENST00000461187 TISP43B9A030 160 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 ZNF263O14978 683 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 TBCAO75347 108 aaKnown RBP15.93■□□□□ 0.14
SMPD4-216ENST00000461187 CYP11A1P05108 521 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 ODC1P11926 461 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 PAX3P23760 479 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 ABCD1P33897 745 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 ALDH1A3P47895 512 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 ACOT2P49753 483 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 TMEM132DQ14C87 1099 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 STXBP5Q5T5C0 1151 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 MAMSTRQ6ZN01 415 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 GAREM2Q75VX8 874 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 OR10T2Q8NGX3 314 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 RASSF8Q8NHQ8 419 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 FAM3CQ92520 227 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 E2F7Q96AV8 911 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 ST6GALNAC4Q9H4F1 302 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 SLITRK6Q9H5Y7 841 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 ASB3Q9Y575 518 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 STYXL1Q9Y6J8 313 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 PIAS3Q9Y6X2 628 aa15.93■□□□□ 0.14
SMPD4-216ENST00000461187 KIAA1549LQ6ZVL6 1849 aa15.92■□□□□ 0.14
SMPD4-216ENST00000461187 SOAT2O75908 522 aa15.92■□□□□ 0.14
SMPD4-216ENST00000461187 TDGF1P13385 188 aa15.92■□□□□ 0.14
SMPD4-216ENST00000461187 DDIT3P35638 169 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms