RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-209	ENST00000460940	TRAPPC11	Q7Z392	1133 aa		11.93	□□□□□ -0.5
APTX-209	ENST00000460940	CEP57	Q86XR8	500 aa		11.93	□□□□□ -0.5
APTX-209	ENST00000460940	CSGALNACT2	Q8N6G5	542 aa		11.93	□□□□□ -0.5
APTX-209	ENST00000460940	CXorf38	Q8TB03	319 aa		11.93	□□□□□ -0.5
APTX-209	ENST00000460940	B3GALT6	Q96L58	329 aa		11.93	□□□□□ -0.5
APTX-209	ENST00000460940	KLHL5	Q96PQ7	755 aa		11.93	□□□□□ -0.5
APTX-209	ENST00000460940	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.93	□□□□□ -0.5
APTX-209	ENST00000460940	RWDD2A	Q9UIY3	292 aa		11.93	□□□□□ -0.5
APTX-209	ENST00000460940	DSE	Q9UL01	958 aa		11.93	□□□□□ -0.5
APTX-209	ENST00000460940	BACE2	Q9Y5Z0	518 aa		11.93	□□□□□ -0.5
APTX-209	ENST00000460940	BRWD1	Q9NSI6	2320 aa		11.93	□□□□□ -0.5
APTX-209	ENST00000460940		H7C4K7	107 aa		11.92	□□□□□ -0.5
APTX-209	ENST00000460940		I3L4J1	428 aa		11.92	□□□□□ -0.5
APTX-209	ENST00000460940	C2CD2L	O14523	706 aa		11.92	□□□□□ -0.5
APTX-209	ENST00000460940	CLGN	O14967	610 aa		11.92	□□□□□ -0.5
APTX-209	ENST00000460940	STX10	O60499	249 aa		11.92	□□□□□ -0.5
APTX-209	ENST00000460940	CLASP2	O75122	1294 aa	Known RBP	11.92	□□□□□ -0.5
APTX-209	ENST00000460940	FGFR1OP	O95684	399 aa	Known RBP	11.92	□□□□□ -0.5
APTX-209	ENST00000460940	CNP	P09543	421 aa	Known RBP	11.92	□□□□□ -0.5
APTX-209	ENST00000460940	TYMP	P19971	482 aa		11.92	□□□□□ -0.5
APTX-209	ENST00000460940	IGFBP6	P24592	240 aa	Predicted RBP	11.92	□□□□□ -0.5
APTX-209	ENST00000460940	TKT	P29401	623 aa	Known RBP	11.92	□□□□□ -0.5
APTX-209	ENST00000460940	NLRP12	P59046	1061 aa		11.92	□□□□□ -0.5
APTX-209	ENST00000460940	VARS2	Q5ST30	1063 aa	Known RBP	11.92	□□□□□ -0.5
APTX-209	ENST00000460940	ELMSAN1	Q6PJG2	1045 aa		11.92	□□□□□ -0.5
APTX-209	ENST00000460940	RBM23	Q86U06	439 aa	Known RBP	11.92	□□□□□ -0.5
APTX-209	ENST00000460940	LNX1	Q8TBB1	728 aa	Predicted RBP	11.92	□□□□□ -0.5
APTX-209	ENST00000460940	PLEKHO2	Q8TD55	490 aa		11.92	□□□□□ -0.5
APTX-209	ENST00000460940	HLA-C	Q95604	372 aa		11.92	□□□□□ -0.5
APTX-209	ENST00000460940	MTRR	Q9UBK8	725 aa		11.92	□□□□□ -0.5
APTX-209	ENST00000460940	SIX4	Q9UIU6	781 aa		11.92	□□□□□ -0.5
APTX-209	ENST00000460940	AGAP1	Q9UPQ3	857 aa		11.92	□□□□□ -0.5
APTX-209	ENST00000460940	SPTLC1	O15269	473 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	TEX28	O15482	410 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	STAU1	O95793	577 aa	Known RBP	11.91	□□□□□ -0.5
APTX-209	ENST00000460940	GNA14	O95837	355 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	KRT19	P08727	400 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	KLRC2	P26717	231 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	GTF2H1	P32780	548 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	ADAM15	Q13444	863 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	ZNF280D	Q6N043	979 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	TMEM184A	Q6ZMB5	413 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	TMEM130	Q8N3G9	435 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	SPATA18	Q8TC71	538 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	CASP10	Q92851	521 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	BORCS6	Q96GS4	357 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	SENP8	Q96LD8	212 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	POP1	Q99575	1024 aa	Known RBP	11.91	□□□□□ -0.5
APTX-209	ENST00000460940	DUSP9	Q99956	384 aa	Known RBP	11.91	□□□□□ -0.5
APTX-209	ENST00000460940	IGFLR1	Q9H665	355 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	UBE2Z	Q9H832	354 aa	Predicted RBP	11.91	□□□□□ -0.5
APTX-209	ENST00000460940	METTL14	Q9HCE5	456 aa	Known RBP	11.91	□□□□□ -0.5
APTX-209	ENST00000460940	DZANK1	Q9NVP4	752 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	GDAP2	Q9NXN4	497 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	CLDND1	Q9NY35	253 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	THEG	Q9P2T0	379 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	DPP7	Q9UHL4	492 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.91	□□□□□ -0.5
APTX-209	ENST00000460940	KPNA7	A9QM74	516 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	PER2	O15055	1255 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	OAZ2	O95190	189 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	GLUD1	P00367	558 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	CYP11A1	P05108	521 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	ERCC5	P28715	1186 aa	Predicted RBP	11.91	□□□□□ -0.5
APTX-209	ENST00000460940	ATIC	P31939	592 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	YWHAH	Q04917	246 aa	Predicted RBP	11.91	□□□□□ -0.5
APTX-209	ENST00000460940	BIRC3	Q13489	604 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	TRPC3	Q13507	836 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	KCNC3	Q14003	757 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	MRPL58	Q14197	206 aa	Known RBP	11.91	□□□□□ -0.5
APTX-209	ENST00000460940	DPCR1	Q3MIW9	517 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	ZACN	Q401N2	412 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.91	□□□□□ -0.5
APTX-209	ENST00000460940	FRMD5	Q7Z6J6	570 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	FILIP1	Q7Z7B0	1213 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	HPDL	Q96IR7	371 aa		11.91	□□□□□ -0.5
APTX-209	ENST00000460940	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.91	□□□□□ -0.5
APTX-209	ENST00000460940	VWA8	A3KMH1	1905 aa		11.9	□□□□□ -0.5
APTX-209	ENST00000460940	CYB561D2	O14569	222 aa		11.9	□□□□□ -0.5
APTX-209	ENST00000460940	PHACTR2	O75167	634 aa		11.9	□□□□□ -0.5
APTX-209	ENST00000460940	GLP2R	O95838	553 aa		11.9	□□□□□ -0.5
APTX-209	ENST00000460940	CLCN4	P51793	760 aa		11.9	□□□□□ -0.5
APTX-209	ENST00000460940	STX17	P56962	302 aa		11.9	□□□□□ -0.5
APTX-209	ENST00000460940	DLG4	P78352	724 aa		11.9	□□□□□ -0.5
APTX-209	ENST00000460940	C1orf220	Q5T0J3	134 aa		11.9	□□□□□ -0.5
APTX-209	ENST00000460940	TDRD10	Q5VZ19	366 aa	Known RBP	11.9	□□□□□ -0.5
APTX-209	ENST00000460940	SLC8B1	Q6J4K2	584 aa		11.9	□□□□□ -0.5
APTX-209	ENST00000460940	METTL23	Q86XA0	190 aa		11.9	□□□□□ -0.5
APTX-209	ENST00000460940	VN1R2	Q8NFZ6	395 aa		11.9	□□□□□ -0.5
APTX-209	ENST00000460940	SLC22A17	Q8WUG5	538 aa		11.9	□□□□□ -0.5
APTX-209	ENST00000460940	HDAC7	Q8WUI4	952 aa		11.9	□□□□□ -0.5
APTX-209	ENST00000460940	ZNF516	Q92618	1163 aa		11.9	□□□□□ -0.5
APTX-209	ENST00000460940	FAM84A	Q96KN4	292 aa		11.9	□□□□□ -0.5
APTX-209	ENST00000460940	VRTN	Q9H8Y1	702 aa		11.9	□□□□□ -0.5
APTX-209	ENST00000460940	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.9	□□□□□ -0.5
APTX-209	ENST00000460940	HCFC2	Q9Y5Z7	792 aa		11.9	□□□□□ -0.5
APTX-209	ENST00000460940	OR6C75	A6NL08	312 aa		11.89	□□□□□ -0.51
APTX-209	ENST00000460940	TBC1D4	O60343	1298 aa		11.89	□□□□□ -0.51
APTX-209	ENST00000460940	TBX10	O75333	385 aa		11.89	□□□□□ -0.51
APTX-209	ENST00000460940	C4BPA	P04003	597 aa	Known RBP	11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms