RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 SLC5A4Q9NY91 659 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 SCOCQ9UIL1 159 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 O00370 1275 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 NUDT17P0C025 328 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 WEE2P0C1S8 567 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 SAT1P21673 171 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 BRD2P25440 801 aaKnown RBP12.7□□□□□ -0.38
CPNE6-202ENST00000460657 ELF1P32519 619 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 NAMPTP43490 491 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 IREB2P48200 963 aaKnown RBP12.7□□□□□ -0.38
CPNE6-202ENST00000460657 MCL1Q07820 350 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 DNAJC3Q13217 504 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 AADACL2Q6P093 401 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 C1orf228Q6PIY5 440 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 CDKL3Q8IVW4 592 aaPredicted RBP12.7□□□□□ -0.38
CPNE6-202ENST00000460657 PRELID2Q8N945 189 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 XPO7Q9UIA9 1087 aaKnown RBP12.7□□□□□ -0.38
CPNE6-202ENST00000460657 PCDHAC2Q9Y5I4 1007 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 PKD1L3Q7Z443 1732 aa12.7□□□□□ -0.38
CPNE6-202ENST00000460657 RAD23BP54727 409 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 SPDYE2Q495Y8 402 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 PPIL6Q8IXY8 311 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 MICALL2Q8IY33 904 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 FAM71AQ8IYT1 594 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 CNPY4Q8N129 248 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 SNED1Q8TER0 1413 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 SPATA33Q96N06 139 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 TMEM150BA6NC51 233 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 GTF2BQ00403 316 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 ASPHQ12797 758 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 PRPSAP1Q14558 356 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 ALG13Q9NP73 1137 aaKnown RBP12.69□□□□□ -0.38
CPNE6-202ENST00000460657 NPHS2Q9NP85 383 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 DIAPH2O60879 1101 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 RBP3P10745 1247 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 KRT10P13645 584 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 NQO1P15559 274 aaKnown RBP12.69□□□□□ -0.38
CPNE6-202ENST00000460657 KCNV1Q6PIU1 500 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 LVRNQ6Q4G3 990 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 NUDCD3Q8IVD9 361 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 ABRAQ8N0Z2 381 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 CGRRF1Q99675 332 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 OPHN1O60890 802 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 GEMIN4P57678 1058 aaKnown RBP12.69□□□□□ -0.38
CPNE6-202ENST00000460657 FAM47CQ5HY64 1035 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 RAPH1Q70E73 1250 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 DPP9Q86TI2 863 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 TSSK1BQ9BXA7 367 aa12.69□□□□□ -0.38
CPNE6-202ENST00000460657 APOL1O14791 398 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 SMIM24O75264 130 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 SHBGP04278 402 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 SUPT20HL2P0C7V6 817 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 PDGFRAP16234 1089 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 C1QBPQ07021 282 aaKnown RBP12.68□□□□□ -0.38
CPNE6-202ENST00000460657 ERMARDQ5T6L9 678 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 IER5Q5VY09 327 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 LRRC15Q8TF66 581 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 NSMCE1Q8WV22 266 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 ALG3Q92685 438 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 RSAD1Q9HA92 442 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 ANKRD63C9JTQ0 380 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 SPAG6O75602 509 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 UBOX5O94941 541 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 CYP1A2P05177 515 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 VCAM1P19320 739 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 MARCKSL1P49006 195 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 SOX10P56693 466 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 JAM2P57087 298 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 TTLL4Q14679 1199 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 SMTNL2Q2TAL5 461 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 HEATR6Q6AI08 1181 aaKnown RBP12.68□□□□□ -0.38
CPNE6-202ENST00000460657 SPOPLQ6IQ16 392 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 SIX6OS1Q8N1H7 587 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 SPATA18Q8TC71 538 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 ATXN2LQ8WWM7 1075 aaKnown RBP12.68□□□□□ -0.38
CPNE6-202ENST00000460657 SHC3Q92529 594 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 VCPIP1Q96JH7 1222 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 SLC13A1Q9BZW2 595 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 DEFB129Q9H1M3 183 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 RAB6BQ9NRW1 208 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 MID2Q9UJV3 735 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 CHMP2BQ9UQN3 213 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 NAALADL1Q9UQQ1 740 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 ZNF200P98182 395 aaPredicted RBP12.68□□□□□ -0.38
CPNE6-202ENST00000460657 MORF4L2Q15014 288 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 TFDP3Q5H9I0 405 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 ARMCX2Q7L311 632 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 CATSPER4Q7RTX7 472 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 ACSF2Q96CM8 615 aaPredicted RBP12.68□□□□□ -0.38
CPNE6-202ENST00000460657 GCOM2Q9BZD3 368 aaPredicted RBP12.68□□□□□ -0.38
CPNE6-202ENST00000460657 KIAA1683Q9H0B3 1180 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 IKZF4Q9H2S9 585 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 Q9H521 79 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 CXorf56Q9H5V9 222 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 FAM96AQ9H5X1 160 aa12.68□□□□□ -0.38
CPNE6-202ENST00000460657 KDM4FA0A1W2PPD8 638 aa12.67□□□□□ -0.38
CPNE6-202ENST00000460657 KCNN4O15554 427 aa12.67□□□□□ -0.38
CPNE6-202ENST00000460657 KYAT1Q16773 422 aa12.67□□□□□ -0.38
CPNE6-202ENST00000460657 SHROOM1Q2M3G4 852 aaPredicted RBP12.67□□□□□ -0.38
CPNE6-202ENST00000460657 CYP4A22Q5TCH4 519 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms