RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ABLIM3O94929 683 aa5.35□□□□□ -1.55
RIF1-207ENST00000454583 LDHAP00338 332 aaKnown RBP5.35□□□□□ -1.55
RIF1-207ENST00000454583 MSNP26038 577 aaKnown RBP5.35□□□□□ -1.55
RIF1-207ENST00000454583 ECHS1P30084 290 aa5.35□□□□□ -1.55
RIF1-207ENST00000454583 AP3M2P53677 418 aa5.35□□□□□ -1.55
RIF1-207ENST00000454583 SLC9C1Q4G0N8 1177 aa5.35□□□□□ -1.55
RIF1-207ENST00000454583 LILRA6Q6PI73 481 aa5.35□□□□□ -1.55
RIF1-207ENST00000454583 SPRED2Q7Z698 418 aa5.35□□□□□ -1.55
RIF1-207ENST00000454583 ANKS1BQ7Z6G8 1248 aa5.35□□□□□ -1.55
RIF1-207ENST00000454583 FAM186BQ8IYM0 893 aa5.35□□□□□ -1.55
RIF1-207ENST00000454583 RBBP8NLQ8NC74 664 aaPredicted RBP5.35□□□□□ -1.55
RIF1-207ENST00000454583 TSC1Q92574 1164 aa5.35□□□□□ -1.55
RIF1-207ENST00000454583 TRIM44Q96DX7 344 aaPredicted RBP5.35□□□□□ -1.55
RIF1-207ENST00000454583 EEF2KMTQ96G04 330 aa5.35□□□□□ -1.55
RIF1-207ENST00000454583 TMEM175Q9BSA9 504 aa5.35□□□□□ -1.55
RIF1-207ENST00000454583 LACRTQ9GZZ8 138 aa5.35□□□□□ -1.55
RIF1-207ENST00000454583 CRISPLD1Q9H336 500 aa5.35□□□□□ -1.55
RIF1-207ENST00000454583 RXFP1Q9HBX9 757 aa5.35□□□□□ -1.55
RIF1-207ENST00000454583 TAB2Q9NYJ8 693 aa5.35□□□□□ -1.55
RIF1-207ENST00000454583 HSFX1Q9UBD0 423 aa5.35□□□□□ -1.55
RIF1-207ENST00000454583 HOOK1Q9UJC3 728 aaKnown RBP5.35□□□□□ -1.55
RIF1-207ENST00000454583 PCDHGC5Q9Y5F6 944 aa5.35□□□□□ -1.55
RIF1-207ENST00000454583 CES2O00748 559 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 HCRTO43612 131 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 SASH3O75995 380 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 FAM13AO94988 1023 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 TKTP29401 623 aaKnown RBP5.34□□□□□ -1.55
RIF1-207ENST00000454583 DEFB103AP81534 67 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 ZBED6P86452 979 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 SPAG1Q07617 926 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 NOTUMQ6P988 496 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 CREG2Q8IUH2 290 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 CCDC170Q8IYT3 715 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 ZSCAN18Q8TBC5 510 aaPredicted RBP5.34□□□□□ -1.55
RIF1-207ENST00000454583 PAWRQ96IZ0 340 aaKnown RBP5.34□□□□□ -1.55
RIF1-207ENST00000454583 IRX2Q9BZI1 471 aaPredicted RBP5.34□□□□□ -1.55
RIF1-207ENST00000454583 ZCWPW1Q9H0M4 648 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 AP5M1Q9H0R1 490 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 LHX5Q9H2C1 402 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 C1orf112Q9NSG2 853 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 TMLHEQ9NVH6 421 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 SNTG2Q9NY99 539 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 PCDHA3Q9Y5H8 950 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.34□□□□□ -1.553e-8■■□□□ 11.6
RIF1-207ENST00000454583 FANCMQ8IYD8 2048 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 EPOPA6NHQ4 379 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 K7ERI5 159 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 KIF2AO00139 706 aaPredicted RBP5.34□□□□□ -1.55
RIF1-207ENST00000454583 NDUFA10O95299 355 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 TNNT1P13805 278 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 ACOT2P49753 483 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 TLE2Q04725 743 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 ADCY1Q08828 1119 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 TFDP1Q14186 410 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 SIX1Q15475 284 aaPredicted RBP5.34□□□□□ -1.55
RIF1-207ENST00000454583 MAPK6Q16659 721 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 WDR93Q6P2C0 686 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 ZDHHC14Q8IZN3 488 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 SLC35F5Q8WV83 523 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 IL23AQ9NPF7 189 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 CRTAC1Q9NQ79 661 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 RAB20Q9NX57 234 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 NEU2Q9Y3R4 380 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 HES2Q9Y543 173 aa5.34□□□□□ -1.55
RIF1-207ENST00000454583 ADAMTS20P59510 1910 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 LRRC53A6NM62 1247 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 GOLGA6L19H0YKK7 550 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 NOP56O00567 594 aaKnown RBP5.34□□□□□ -1.56
RIF1-207ENST00000454583 CYP1A2P05177 515 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 GPD2P43304 727 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 RAB27AP51159 221 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 LILRA4P59901 499 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 EMC10Q5UCC4 262 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 DCAF12L1Q5VU92 463 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 KRT39Q6A163 491 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 TMEM184AQ6ZMB5 413 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 TAS1R1Q7RTX1 841 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 LRRTM3Q86VH5 581 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 CNGA4Q8IV77 575 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 OR10T2Q8NGX3 314 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 KIF18AQ8NI77 898 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 SUSD3Q96L08 255 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 FTHL17Q9BXU8 183 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 MTMR12Q9C0I1 747 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 STARD7Q9NQZ5 370 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 TAS2R14Q9NYV8 317 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 CXXC1Q9P0U4 656 aaPredicted RBP5.34□□□□□ -1.56
RIF1-207ENST00000454583 DNAJB4Q9UDY4 337 aa5.34□□□□□ -1.56
RIF1-207ENST00000454583 R3HCC1Q9Y3T6 440 aaKnown RBP5.34□□□□□ -1.56
RIF1-207ENST00000454583 SHISA7A6NL88 538 aa5.33□□□□□ -1.56
RIF1-207ENST00000454583 PDE2AO00408 941 aaPredicted RBP5.33□□□□□ -1.56
RIF1-207ENST00000454583 FOXN3O00409 490 aaPredicted RBP5.33□□□□□ -1.56
RIF1-207ENST00000454583 RRP9O43818 475 aaKnown RBP5.33□□□□□ -1.56
RIF1-207ENST00000454583 GFPT2O94808 682 aa5.33□□□□□ -1.56
RIF1-207ENST00000454583 OLFM2O95897 454 aa5.33□□□□□ -1.56
RIF1-207ENST00000454583 GNAT1P11488 350 aa5.33□□□□□ -1.56
RIF1-207ENST00000454583 PGFP49763 221 aa5.33□□□□□ -1.56
RIF1-207ENST00000454583 GATMP50440 423 aa5.33□□□□□ -1.56
RIF1-207ENST00000454583 PLCB3Q01970 1234 aa5.33□□□□□ -1.56
RIF1-207ENST00000454583 PM20D1Q6GTS8 502 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms