RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 SH3GL2Q99962 352 aa17.15■□□□□ 0.34
AP000253.1-201ENST00000449339 MROH7Q68CQ1 1323 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 MYADML2A6NDP7 307 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 THAP12O43422 761 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 GPR32O75388 356 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 TNNC2P02585 160 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 KRT19P08727 400 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 CYP2C9P11712 490 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 TM4SF4P48230 202 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 LMAN1P49257 510 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 RWDD2BP57060 319 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 IQCKQ8N0W5 287 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 UBR7Q8N806 425 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 ANKRD36BP1Q96IX9 119 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 ZIM3Q96PE6 472 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 OSMRQ99650 979 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 AP5M1Q9H0R1 490 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 SIX4Q9UIU6 781 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 GABRQQ9UN88 632 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 NRCAMQ92823 1304 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 TRIP11Q15643 1979 aa17.14■□□□□ 0.33
AP000253.1-201ENST00000449339 CA12O43570 354 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 OPA1O60313 960 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 WEE2P0C1S8 567 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 ZNF132P52740 706 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 NOMO3P69849 1222 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 SGSM1Q2NKQ1 1148 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 SLC10A6Q3KNW5 377 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 CFAP58Q5T655 872 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 ZNF410Q86VK4 478 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 TRIM7Q9C029 511 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 XYLT2Q9H1B5 865 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 NEUROG2Q9H2A3 272 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 POLIQ9UNA4 740 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 TREHO43280 583 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 IL18RAPO95256 599 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 HSPA9P38646 679 aaKnown RBP17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 CPT1AP50416 773 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 IRF5Q13568 498 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 ZNF699Q32M78 642 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 ZNF394Q53GI3 561 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 LLGL2Q6P1M3 1020 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 PRELID2Q8N945 189 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 C1orf127Q8N9H9 656 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 DNAJB3Q8WWF6 145 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 C11orf70Q9BRQ4 267 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 TRIM51Q9BSJ1 452 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 NIF3L1Q9GZT8 377 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 RAB17Q9H0T7 212 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 CXCL16Q9H2A7 254 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 ADAM22Q9P0K1 906 aa17.13■□□□□ 0.33
AP000253.1-201ENST00000449339 CITO14578 2027 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 A0A1B0GUA9 196 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 MBLAC1A4D2B0 266 aaPredicted RBP17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 MYO1FO00160 1098 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 HAS3O00219 553 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 PHF2O75151 1096 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 PSMC4P43686 418 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 DHX34Q14147 1143 aaKnown RBP17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 FSCN1Q16658 493 aaKnown RBP17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 LIN9Q5TKA1 542 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 ZDHHC14Q8IZN3 488 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 ZNF606Q8WXB4 792 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 C18orf8Q96DM3 657 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 DPH5Q9H2P9 285 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 FAM114A2Q9NRY5 505 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 NXF1Q9UBU9 619 aaKnown RBP17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 DNAH12Q6ZR08 3092 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 GOLGA6CA6NDK9 693 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 ERICH4A6NGS2 130 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 GOLGA8KD6RF30 607 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 GOLGA6DP0CG33 693 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 HOXA11P31270 313 aaPredicted RBP17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 CHRNA3P32297 505 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 ASPAP45381 313 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 RAP1GAPP47736 663 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 CAP1Q01518 475 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 SLC13A5Q86YT5 568 aaPredicted RBP17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 PIK3R5Q8WYR1 880 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 VCPIP1Q96JH7 1222 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 GPBP1L1Q9HC44 474 aaPredicted RBP17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 CISHQ9NSE2 258 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 GOLGA6AQ9NYA3 693 aa17.12■□□□□ 0.33
AP000253.1-201ENST00000449339 NPTXRO95502 500 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 KRT14P02533 472 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 ITGB3P05106 788 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 SLC1A1P43005 524 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 ADAM17P78536 824 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 CATSPER4Q7RTX7 472 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 PHF13Q86YI8 300 aaPredicted RBP17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 TRIB2Q92519 343 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 MAGOHBQ96A72 148 aaKnown RBP17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 ERP44Q9BS26 406 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 PLVAPQ9BX97 442 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 GCOM2Q9BZD3 368 aaPredicted RBP17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 TRIM31Q9BZY9 425 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 SMIM35A0A1B0GVV1 85 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 TCRBV7S2A1N4TA0A589 114 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 FAM187AA6NFU0 413 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms