RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 ZBTB6Q15916 424 aa9.48□□□□□ -0.89
USP6NL-203ENST00000443016 TPGS2Q68CL5 300 aa9.48□□□□□ -0.89
USP6NL-203ENST00000443016 IQCEQ6IPM2 695 aa9.48□□□□□ -0.89
USP6NL-203ENST00000443016 SLC39A4Q6P5W5 647 aa9.48□□□□□ -0.89
USP6NL-203ENST00000443016 HVCN1Q96D96 273 aa9.48□□□□□ -0.89
USP6NL-203ENST00000443016 ACCSQ96QU6 501 aa9.48□□□□□ -0.89
USP6NL-203ENST00000443016 ASB7Q9H672 318 aa9.48□□□□□ -0.89
USP6NL-203ENST00000443016 PTPRZ1P23471 2315 aaPredicted RBP9.48□□□□□ -0.89
USP6NL-203ENST00000443016 FAM189A1O60320 539 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 ABLIM3O94929 683 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 RHOP08100 348 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 NFICP08651 508 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 SRFP11831 508 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 PTPN2P17706 415 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 SPATA1Q5VX52 437 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 ASTLQ6HA08 431 aaPredicted RBP9.47□□□□□ -0.89
USP6NL-203ENST00000443016 ALYREFQ86V81 257 aaKnown RBP9.47□□□□□ -0.89
USP6NL-203ENST00000443016 TCEAL8Q8IYN2 117 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 TMEM130Q8N3G9 435 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 PRSS33Q8NF86 280 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 ITFG1Q8TB96 612 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 ING5Q8WYH8 240 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 DNAJC19Q96DA6 116 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 CORO1BQ9BR76 489 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 LRRC27Q9C0I9 530 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 OLFML3Q9NRN5 406 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 PANK4Q9NVE7 773 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 DNMT3BQ9UBC3 853 aaKnown RBP9.47□□□□□ -0.89
USP6NL-203ENST00000443016 CA14Q9ULX7 337 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 DENND4AQ7Z401 1863 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 CFAP54Q96N23 3096 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 M0QZQ0 153 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 ODC1P11926 461 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 CLCN5P51795 746 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 LILRA4P59901 499 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 AMPD3Q01432 767 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 HTR4Q13639 388 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 MRPL58Q14197 206 aaKnown RBP9.47□□□□□ -0.89
USP6NL-203ENST00000443016 CYP4A22Q5TCH4 519 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 RESP18Q5W5W9 173 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 OVOS1Q6IE37 1185 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 ARMCX5Q6P1M9 558 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 PARM1Q6UWI2 310 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 MTSS1LQ765P7 747 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 CCDC65Q8IXS2 484 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 GPR152Q8TDT2 470 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 FGF14Q92915 247 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 DHX58Q96C10 678 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 ZNF512Q96ME7 567 aaPredicted RBP9.47□□□□□ -0.89
USP6NL-203ENST00000443016 PGLYRP2Q96PD5 576 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 IRF2BPLQ9H1B7 796 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 IKZF4Q9H2S9 585 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 WNT16Q9UBV4 365 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 AFF4Q9UHB7 1163 aaKnown RBP9.47□□□□□ -0.89
USP6NL-203ENST00000443016 KCNH3Q9ULD8 1083 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 INSL5Q9Y5Q6 135 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 DOCK6Q96HP0 2047 aa9.47□□□□□ -0.89
USP6NL-203ENST00000443016 DOCK8Q8NF50 2099 aa9.46□□□□□ -0.89
USP6NL-203ENST00000443016 A0A087X0B3 334 aa9.46□□□□□ -0.89
USP6NL-203ENST00000443016 ARHGEF37A1IGU5 675 aa9.46□□□□□ -0.89
USP6NL-203ENST00000443016 H0Y858 1186 aa9.46□□□□□ -0.89
USP6NL-203ENST00000443016 TBC1D4O60343 1298 aa9.46□□□□□ -0.89
USP6NL-203ENST00000443016 KINO60870 393 aaKnown RBP9.46□□□□□ -0.89
USP6NL-203ENST00000443016 GADD45BO75293 160 aaPredicted RBP9.46□□□□□ -0.89
USP6NL-203ENST00000443016 OAZ2O95190 189 aa9.46□□□□□ -0.89
USP6NL-203ENST00000443016 POU2F2P09086 479 aa9.46□□□□□ -0.89
USP6NL-203ENST00000443016 FAM160A1Q05DH4 1040 aa9.46□□□□□ -0.89
USP6NL-203ENST00000443016 ALCAMQ13740 583 aa9.46□□□□□ -0.89
USP6NL-203ENST00000443016 STXBP4Q6ZWJ1 553 aa9.46□□□□□ -0.89
USP6NL-203ENST00000443016 PDZD4Q76G19 769 aaPredicted RBP9.46□□□□□ -0.89
USP6NL-203ENST00000443016 TMEM105Q8N8V8 129 aa9.46□□□□□ -0.89
USP6NL-203ENST00000443016 IQUBQ8NA54 791 aa9.46□□□□□ -0.89
USP6NL-203ENST00000443016 ATOH1Q92858 354 aaPredicted RBP9.46□□□□□ -0.89
USP6NL-203ENST00000443016 MCRS1Q96EZ8 462 aa9.46□□□□□ -0.89
USP6NL-203ENST00000443016 FAM213AQ9BRX8 229 aa9.46□□□□□ -0.89
USP6NL-203ENST00000443016 OXCT2Q9BYC2 517 aaPredicted RBP9.46□□□□□ -0.89
USP6NL-203ENST00000443016 DERAQ9Y315 318 aa9.46□□□□□ -0.89
USP6NL-203ENST00000443016 C2CD2Q9Y426 696 aa9.46□□□□□ -0.89
USP6NL-203ENST00000443016 STYXL1Q9Y6J8 313 aa9.46□□□□□ -0.89
USP6NL-203ENST00000443016 ANHXE9PGG2 379 aa9.46□□□□□ -0.9
USP6NL-203ENST00000443016 PPEF2O14830 753 aa9.46□□□□□ -0.9
USP6NL-203ENST00000443016 SEC24AO95486 1093 aa9.46□□□□□ -0.9
USP6NL-203ENST00000443016 OR4Q2P0C623 313 aa9.46□□□□□ -0.9
USP6NL-203ENST00000443016 PFKFB1P16118 471 aa9.46□□□□□ -0.9
USP6NL-203ENST00000443016 ADSSP30520 456 aa9.46□□□□□ -0.9
USP6NL-203ENST00000443016 TWF1Q12792 350 aa9.46□□□□□ -0.9
USP6NL-203ENST00000443016 TCF15Q12870 199 aa9.46□□□□□ -0.9
USP6NL-203ENST00000443016 KLHL40Q2TBA0 621 aa9.46□□□□□ -0.9
USP6NL-203ENST00000443016 L1TD1Q5T7N2 865 aaKnown RBP9.46□□□□□ -0.9
USP6NL-203ENST00000443016 C9orf57Q5W0N0 161 aa9.46□□□□□ -0.9
USP6NL-203ENST00000443016 RNF19BQ6ZMZ0 732 aa9.46□□□□□ -0.9
USP6NL-203ENST00000443016 NPAS3Q8IXF0 933 aa9.46□□□□□ -0.9
USP6NL-203ENST00000443016 SAAL1Q96ER3 474 aa9.46□□□□□ -0.9
USP6NL-203ENST00000443016 SENP8Q96LD8 212 aa9.46□□□□□ -0.9
USP6NL-203ENST00000443016 RPP25Q9BUL9 199 aaKnown RBP9.46□□□□□ -0.9
USP6NL-203ENST00000443016 TNMDQ9H2S6 317 aa9.46□□□□□ -0.9
USP6NL-203ENST00000443016 TMEM206Q9H813 350 aa9.46□□□□□ -0.9
USP6NL-203ENST00000443016 DPP3Q9NY33 737 aa9.46□□□□□ -0.9
USP6NL-203ENST00000443016 R3HCC1Q9Y3T6 440 aaKnown RBP9.46□□□□□ -0.9
USP6NL-203ENST00000443016 OR6C75A6NL08 312 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms