RNA–Protein interactions for RNA: ENST00000440452.5

PCGF3-207, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 3,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-207ENST00000440452 RIT2Q99578 217 aa13.12□□□□□ -0.31
PCGF3-207ENST00000440452 RPAP3Q9H6T3 665 aaPredicted RBP13.12□□□□□ -0.31
PCGF3-207ENST00000440452 AGO4Q9HCK5 861 aaKnown RBP13.12□□□□□ -0.31
PCGF3-207ENST00000440452 RNF146Q9NTX7 359 aa13.12□□□□□ -0.31
PCGF3-207ENST00000440452 CHMP2BQ9UQN3 213 aa13.12□□□□□ -0.31
PCGF3-207ENST00000440452 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.12□□□□□ -0.31
PCGF3-207ENST00000440452 ADAMTSL1Q8N6G6 1762 aa13.12□□□□□ -0.31
PCGF3-207ENST00000440452 KLRG2A4D1S0 409 aaPredicted RBP13.12□□□□□ -0.31
PCGF3-207ENST00000440452 FAM187AA6NFU0 413 aa13.12□□□□□ -0.31
PCGF3-207ENST00000440452 PODXLO00592 558 aa13.12□□□□□ -0.31
PCGF3-207ENST00000440452 ZBED4O75132 1171 aa13.12□□□□□ -0.31
PCGF3-207ENST00000440452 RNF8O76064 485 aa13.12□□□□□ -0.31
PCGF3-207ENST00000440452 PYGBP11216 843 aa13.12□□□□□ -0.31
PCGF3-207ENST00000440452 PSMC5P62195 406 aa13.12□□□□□ -0.31
PCGF3-207ENST00000440452 EN1Q05925 392 aaPredicted RBP13.12□□□□□ -0.31
PCGF3-207ENST00000440452 KIF22Q14807 665 aa13.12□□□□□ -0.31
PCGF3-207ENST00000440452 TAF1BQ53T94 588 aaPredicted RBP13.12□□□□□ -0.31
PCGF3-207ENST00000440452 BRDTQ58F21 947 aaPredicted RBP13.12□□□□□ -0.31
PCGF3-207ENST00000440452 SNRNP48Q6IEG0 339 aaKnown RBP13.12□□□□□ -0.31
PCGF3-207ENST00000440452 DCUN1D2Q6PH85 259 aa13.12□□□□□ -0.31
PCGF3-207ENST00000440452 BTNL9Q6UXG8 535 aa13.12□□□□□ -0.31
PCGF3-207ENST00000440452 GALNT15Q8N3T1 639 aa13.12□□□□□ -0.31
PCGF3-207ENST00000440452 BSNDQ8WZ55 320 aa13.12□□□□□ -0.31
PCGF3-207ENST00000440452 KLF6Q99612 283 aaPredicted RBP13.12□□□□□ -0.31
PCGF3-207ENST00000440452 MOV10L1Q9BXT6 1211 aaKnown RBP13.12□□□□□ -0.31
PCGF3-207ENST00000440452 RANBP17Q9H2T7 1088 aaKnown RBP13.12□□□□□ -0.31
PCGF3-207ENST00000440452 DMAC2Q9NW81 257 aa13.12□□□□□ -0.31
PCGF3-207ENST00000440452 NMRK1Q9NWW6 199 aa13.12□□□□□ -0.31
PCGF3-207ENST00000440452 RIPK3Q9Y572 518 aa13.12□□□□□ -0.31
PCGF3-207ENST00000440452 ARHGAP42A6NI28 874 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 CCNE2O96020 404 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 EGFRP00533 1210 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 TROVE2P10155 538 aaKnown RBP eCLIP13.11□□□□□ -0.313e-6■■■■■ 28.8
PCGF3-207ENST00000440452 CHRNB2P17787 502 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 ADSSP30520 456 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 VHLP40337 213 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 ZDHHC24Q6UX98 284 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 MCF2L2Q86YR7 1114 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 ANKRD35Q8N283 1001 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 NMD3Q96D46 503 aaKnown RBP13.11□□□□□ -0.31
PCGF3-207ENST00000440452 PHTF1Q9UMS5 762 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 PFASO15067 1338 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 MYH11P35749 1972 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 COL5A3P25940 1745 aaPredicted RBP13.11□□□□□ -0.31
PCGF3-207ENST00000440452 CES2O00748 559 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 ICAM1P05362 532 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 HNRNPCP07910 306 aaKnown RBP eCLIP13.11□□□□□ -0.31
PCGF3-207ENST00000440452 CFHP08603 1231 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 ESRRAP11474 423 aaPredicted RBP13.11□□□□□ -0.31
PCGF3-207ENST00000440452 CD19P15391 556 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 TPP2P29144 1249 aaPredicted RBP13.11□□□□□ -0.31
PCGF3-207ENST00000440452 MAP7Q14244 749 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 PPP1R21Q6ZMI0 780 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 MTDHQ86UE4 582 aaKnown RBP13.11□□□□□ -0.31
PCGF3-207ENST00000440452 LMO3Q8TAP4 145 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 ITFG2Q969R8 447 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 WNT8AQ9H1J5 351 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 R3HDM2Q9Y2K5 976 aaKnown RBP13.11□□□□□ -0.31
PCGF3-207ENST00000440452 ASTN2O75129 1339 aaPredicted RBP13.11□□□□□ -0.31
PCGF3-207ENST00000440452 DCTN3O75935 186 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 KRT19P08727 400 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 ZSCAN5DPP0CG00 497 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 POTEJP0CG39 1038 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 ORC1Q13415 861 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 THOC5Q13769 683 aaKnown RBP13.11□□□□□ -0.31
PCGF3-207ENST00000440452 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.11□□□□□ -0.316e-7■■■■□ 24.8
PCGF3-207ENST00000440452 USP37Q86T82 979 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 HIC2Q96JB3 615 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 ARHGEF3Q9NR81 526 aa13.11□□□□□ -0.31
PCGF3-207ENST00000440452 RPTORQ8N122 1335 aa13.1□□□□□ -0.31
PCGF3-207ENST00000440452 MAST2Q6P0Q8 1798 aa13.1□□□□□ -0.31
PCGF3-207ENST00000440452 TPBGLP0DKB5 382 aa13.1□□□□□ -0.31
PCGF3-207ENST00000440452 HMGCS2P54868 508 aa13.1□□□□□ -0.31
PCGF3-207ENST00000440452 RBBP8NLQ8NC74 664 aaPredicted RBP13.1□□□□□ -0.31
PCGF3-207ENST00000440452 DENND2DQ9H6A0 471 aaPredicted RBP13.1□□□□□ -0.31
PCGF3-207ENST00000440452 GRHL1Q9NZI5 618 aa13.1□□□□□ -0.31
PCGF3-207ENST00000440452 NCANO14594 1321 aa13.1□□□□□ -0.31
PCGF3-207ENST00000440452 PIK3R2O00459 728 aa13.1□□□□□ -0.31
PCGF3-207ENST00000440452 CIB2O75838 187 aa13.1□□□□□ -0.31
PCGF3-207ENST00000440452 GCLCP48506 637 aaPredicted RBP13.1□□□□□ -0.31
PCGF3-207ENST00000440452 ANO5Q75V66 913 aa13.1□□□□□ -0.31
PCGF3-207ENST00000440452 DEPTORQ8TB45 409 aa13.1□□□□□ -0.31
PCGF3-207ENST00000440452 MIPOL1Q8TD10 442 aa13.1□□□□□ -0.31
PCGF3-207ENST00000440452 POLR3FQ9H1D9 316 aaPredicted RBP13.1□□□□□ -0.31
PCGF3-207ENST00000440452 ZDHHC18Q9NUE0 388 aa13.1□□□□□ -0.31
PCGF3-207ENST00000440452 SERPINB3P29508 390 aa13.09□□□□□ -0.31
PCGF3-207ENST00000440452 KPNB1Q14974 876 aaKnown RBP13.09□□□□□ -0.31
PCGF3-207ENST00000440452 PGM5Q15124 567 aa13.09□□□□□ -0.31
PCGF3-207ENST00000440452 TTLL6Q8N841 843 aa13.09□□□□□ -0.31
PCGF3-207ENST00000440452 RBM41Q96IZ5 413 aaKnown RBP13.09□□□□□ -0.31
PCGF3-207ENST00000440452 NDNQ99608 321 aa13.09□□□□□ -0.31
PCGF3-207ENST00000440452 ADAM7Q9H2U9 754 aa13.09□□□□□ -0.31
PCGF3-207ENST00000440452 NXF1Q9UBU9 619 aaKnown RBP13.09□□□□□ -0.31
PCGF3-207ENST00000440452 ZNF711Q9Y462 761 aa13.09□□□□□ -0.31
PCGF3-207ENST00000440452 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.09□□□□□ -0.31
PCGF3-207ENST00000440452 WNT10BO00744 389 aa13.09□□□□□ -0.31
PCGF3-207ENST00000440452 TLR3O15455 904 aaKnown RBP13.09□□□□□ -0.31
PCGF3-207ENST00000440452 PEX11AO75192 247 aa13.09□□□□□ -0.31
PCGF3-207ENST00000440452 NR3C2P08235 984 aa13.09□□□□□ -0.31
PCGF3-207ENST00000440452 SRGAP2CP0DJJ0 459 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms