RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 CYP26A1O43174 497 aa24.61■■□□□ 1.53
CPSF4-204ENST00000436336 PLEKP08567 350 aaPredicted RBP24.61■■□□□ 1.53
CPSF4-204ENST00000436336 RAP1GAPP47736 663 aa24.61■■□□□ 1.53
CPSF4-204ENST00000436336 DEFB103AP81534 67 aa24.61■■□□□ 1.53
CPSF4-204ENST00000436336 DCLRE1AQ6PJP8 1040 aa24.61■■□□□ 1.53
CPSF4-204ENST00000436336 C3orf58Q8NDZ4 430 aa24.61■■□□□ 1.53
CPSF4-204ENST00000436336 ZMYND8Q9ULU4 1186 aaPredicted RBP24.61■■□□□ 1.53
CPSF4-204ENST00000436336 ZKSCAN5Q9Y2L8 839 aa24.61■■□□□ 1.53
CPSF4-204ENST00000436336 CDH8P55286 799 aa24.6■■□□□ 1.53
CPSF4-204ENST00000436336 BPIFB4P59827 614 aa24.6■■□□□ 1.53
CPSF4-204ENST00000436336 RAD9BQ6WBX8 426 aa24.6■■□□□ 1.53
CPSF4-204ENST00000436336 DPH6Q7L8W6 267 aa24.6■■□□□ 1.53
CPSF4-204ENST00000436336 LRRC43Q8N309 656 aa24.6■■□□□ 1.53
CPSF4-204ENST00000436336 RBBP8NLQ8NC74 664 aaPredicted RBP24.6■■□□□ 1.53
CPSF4-204ENST00000436336 CCDC42Q96M95 316 aa24.6■■□□□ 1.53
CPSF4-204ENST00000436336 NRDE2Q9H7Z3 1164 aa24.6■■□□□ 1.53
CPSF4-204ENST00000436336 TSC2P49815 1807 aa24.6■■□□□ 1.53
CPSF4-204ENST00000436336 B4GALT3O60512 393 aa24.59■■□□□ 1.53
CPSF4-204ENST00000436336 B3GAT3O94766 335 aa24.59■■□□□ 1.53
CPSF4-204ENST00000436336 CYLC1P35663 651 aaPredicted RBP24.59■■□□□ 1.53
CPSF4-204ENST00000436336 EIF4A3P38919 411 aaKnown RBP24.59■■□□□ 1.53
CPSF4-204ENST00000436336 AARSP49588 968 aaKnown RBP eCLIP24.59■■□□□ 1.532e-6■■■■■ 40.7
CPSF4-204ENST00000436336 ZNF132P52740 706 aa24.59■■□□□ 1.53
CPSF4-204ENST00000436336 PTK2Q05397 1052 aa24.59■■□□□ 1.53
CPSF4-204ENST00000436336 INCA1Q0VD86 236 aa24.59■■□□□ 1.53
CPSF4-204ENST00000436336 TOP6BLQ8N6T0 577 aa24.59■■□□□ 1.53
CPSF4-204ENST00000436336 DEF6Q9H4E7 631 aa24.59■■□□□ 1.53
CPSF4-204ENST00000436336 TMEM189-UBE2V1I3L0A0 370 aa24.58■■□□□ 1.53
CPSF4-204ENST00000436336 HUS1O60921 280 aa24.58■■□□□ 1.53
CPSF4-204ENST00000436336 TACC1O75410 805 aa24.58■■□□□ 1.53
CPSF4-204ENST00000436336 MTF1Q14872 753 aa24.58■■□□□ 1.53
CPSF4-204ENST00000436336 SOWAHAQ2M3V2 549 aa24.58■■□□□ 1.53
CPSF4-204ENST00000436336 TMEM240Q5SV17 173 aa24.58■■□□□ 1.53
CPSF4-204ENST00000436336 LIMS2Q7Z4I7 341 aa24.58■■□□□ 1.53
CPSF4-204ENST00000436336 APPL2Q8NEU8 664 aa24.58■■□□□ 1.53
CPSF4-204ENST00000436336 RABGGTAQ92696 567 aa24.58■■□□□ 1.53
CPSF4-204ENST00000436336 LBHD1Q9BQE6 289 aaPredicted RBP24.58■■□□□ 1.53
CPSF4-204ENST00000436336 DNAJB4Q9UDY4 337 aa24.58■■□□□ 1.53
CPSF4-204ENST00000436336 PYCARDQ9ULZ3 195 aa24.58■■□□□ 1.53
CPSF4-204ENST00000436336 BARX2Q9UMQ3 279 aaPredicted RBP24.58■■□□□ 1.53
CPSF4-204ENST00000436336 CILPO75339 1184 aa24.58■■□□□ 1.52
CPSF4-204ENST00000436336 FAM163BP0C2L3 166 aa24.58■■□□□ 1.52
CPSF4-204ENST00000436336 CYP11B1P15538 503 aa24.58■■□□□ 1.52
CPSF4-204ENST00000436336 ANXA13P27216 316 aa24.58■■□□□ 1.52
CPSF4-204ENST00000436336 OR1G1P47890 313 aa24.58■■□□□ 1.52
CPSF4-204ENST00000436336 PDE6CP51160 858 aa24.58■■□□□ 1.52
CPSF4-204ENST00000436336 EPHB4P54760 987 aa24.58■■□□□ 1.52
CPSF4-204ENST00000436336 ASTE1Q2TB18 679 aaPredicted RBP24.58■■□□□ 1.52
CPSF4-204ENST00000436336 ZNF571Q7Z3V5 609 aaPredicted RBP24.58■■□□□ 1.52
CPSF4-204ENST00000436336 SLC47A2Q86VL8 602 aa24.58■■□□□ 1.52
CPSF4-204ENST00000436336 TNS4Q8IZW8 715 aa24.58■■□□□ 1.52
CPSF4-204ENST00000436336 EPS8L1Q8TE68 723 aa24.58■■□□□ 1.52
CPSF4-204ENST00000436336 ZNF689Q96CS4 500 aaPredicted RBP24.58■■□□□ 1.52
CPSF4-204ENST00000436336 SENP8Q96LD8 212 aa24.58■■□□□ 1.52
CPSF4-204ENST00000436336 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.58■■□□□ 1.521e-6■■■□□ 19
CPSF4-204ENST00000436336 TMEM175Q9BSA9 504 aa24.58■■□□□ 1.52
CPSF4-204ENST00000436336 EPN1Q9Y6I3 576 aaPredicted RBP24.58■■□□□ 1.52
CPSF4-204ENST00000436336 ZBBXA8MT70 800 aa24.57■■□□□ 1.52
CPSF4-204ENST00000436336 CYB561D2O14569 222 aa24.57■■□□□ 1.52
CPSF4-204ENST00000436336 IGFBP6P24592 240 aaPredicted RBP24.57■■□□□ 1.52
CPSF4-204ENST00000436336 CD300LGQ6UXG3 332 aa24.57■■□□□ 1.52
CPSF4-204ENST00000436336 DSTYKQ6XUX3 929 aa24.57■■□□□ 1.52
CPSF4-204ENST00000436336 VPS36Q86VN1 386 aa24.57■■□□□ 1.52
CPSF4-204ENST00000436336 MRPL45Q9BRJ2 306 aaKnown RBP24.57■■□□□ 1.52
CPSF4-204ENST00000436336 L1RE1Q9UN81 338 aa24.57■■□□□ 1.52
CPSF4-204ENST00000436336 AKR1B10O60218 316 aa24.56■■□□□ 1.52
CPSF4-204ENST00000436336 KIF4AO95239 1232 aa24.56■■□□□ 1.52
CPSF4-204ENST00000436336 NDUFA10O95299 355 aa24.56■■□□□ 1.52
CPSF4-204ENST00000436336 KIF11P52732 1056 aa24.56■■□□□ 1.52
CPSF4-204ENST00000436336 PAN2Q504Q3 1202 aaKnown RBP24.56■■□□□ 1.52
CPSF4-204ENST00000436336 SYT11Q9BT88 431 aa24.56■■□□□ 1.52
CPSF4-204ENST00000436336 RC3H2Q9HBD1 1191 aaKnown RBP24.56■■□□□ 1.52
CPSF4-204ENST00000436336 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.56■■□□□ 1.52
CPSF4-204ENST00000436336 NOCTQ9UK39 431 aaKnown RBP24.56■■□□□ 1.52
CPSF4-204ENST00000436336 EIF3CLB5ME19 914 aaKnown RBP24.55■■□□□ 1.52
CPSF4-204ENST00000436336 ALDH2P05091 517 aa24.55■■□□□ 1.52
CPSF4-204ENST00000436336 BMS1Q14692 1282 aaKnown RBP24.55■■□□□ 1.52
CPSF4-204ENST00000436336 TIGD5Q53EQ6 642 aa24.55■■□□□ 1.52
CPSF4-204ENST00000436336 ZNF394Q53GI3 561 aa24.55■■□□□ 1.52
CPSF4-204ENST00000436336 NOP9Q86U38 636 aaKnown RBP24.55■■□□□ 1.52
CPSF4-204ENST00000436336 UNC93AQ86WB7 457 aa24.55■■□□□ 1.52
CPSF4-204ENST00000436336 ZNF677Q86XU0 584 aa24.55■■□□□ 1.52
CPSF4-204ENST00000436336 WHAMMQ8TF30 809 aa24.55■■□□□ 1.52
CPSF4-204ENST00000436336 HERVK_113Q902F9 699 aa24.55■■□□□ 1.52
CPSF4-204ENST00000436336 EIF3CQ99613 913 aaKnown RBP24.55■■□□□ 1.52
CPSF4-204ENST00000436336 AGPAT1Q99943 283 aa24.55■■□□□ 1.52
CPSF4-204ENST00000436336 ACP6Q9NPH0 428 aa24.55■■□□□ 1.52
CPSF4-204ENST00000436336 KIAA1671Q9BY89 1806 aa24.55■■□□□ 1.52
CPSF4-204ENST00000436336 NRP1O14786 923 aa24.55■■□□□ 1.52
CPSF4-204ENST00000436336 PAEPP09466 180 aa24.55■■□□□ 1.52
CPSF4-204ENST00000436336 GNA15P30679 374 aa24.55■■□□□ 1.52
CPSF4-204ENST00000436336 NDST1P52848 882 aa24.55■■□□□ 1.52
CPSF4-204ENST00000436336 FAM117BQ6P1L5 589 aa24.55■■□□□ 1.52
CPSF4-204ENST00000436336 KBTBD7Q8WVZ9 684 aa24.55■■□□□ 1.52
CPSF4-204ENST00000436336 ARHGEF37A1IGU5 675 aa24.54■■□□□ 1.52
CPSF4-204ENST00000436336 M0QZQ0 153 aa24.54■■□□□ 1.52
CPSF4-204ENST00000436336 LCA5LO95447 670 aa24.54■■□□□ 1.52
CPSF4-204ENST00000436336 WARSP23381 471 aaKnown RBP24.54■■□□□ 1.52
CPSF4-204ENST00000436336 RAD23BP54727 409 aa24.54■■□□□ 1.52
CPSF4-204ENST00000436336 SLC18A3Q16572 532 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms