RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 TSHZ1Q6ZSZ6 1077 aa6.15□□□□□ -1.42
PTPN4-204ENST00000431283 NSUN7Q8NE18 718 aaKnown RBP6.15□□□□□ -1.42
PTPN4-204ENST00000431283 LPIN2Q92539 896 aa6.15□□□□□ -1.42
PTPN4-204ENST00000431283 ARPP21Q9UBL0 812 aaPredicted RBP6.15□□□□□ -1.42
PTPN4-204ENST00000431283 SHTN1A0MZ66 631 aa6.14□□□□□ -1.43
PTPN4-204ENST00000431283 HTRA2O43464 458 aaPredicted RBP6.14□□□□□ -1.43
PTPN4-204ENST00000431283 RBMXL2O75526 392 aaKnown RBP6.14□□□□□ -1.43
PTPN4-204ENST00000431283 C1QL1O75973 258 aa6.14□□□□□ -1.43
PTPN4-204ENST00000431283 POU3F3P20264 500 aaPredicted RBP6.14□□□□□ -1.43
PTPN4-204ENST00000431283 EFCAB2Q5VUJ9 269 aa6.14□□□□□ -1.43
PTPN4-204ENST00000431283 PTF1AQ7RTS3 328 aa6.14□□□□□ -1.43
PTPN4-204ENST00000431283 TTC7BQ86TV6 843 aa6.14□□□□□ -1.43
PTPN4-204ENST00000431283 PDPRQ8NCN5 879 aa6.14□□□□□ -1.43
PTPN4-204ENST00000431283 MYCBPAPQ8TBZ2 947 aa6.14□□□□□ -1.43
PTPN4-204ENST00000431283 MTMR8Q96EF0 704 aa6.14□□□□□ -1.43
PTPN4-204ENST00000431283 TRIB1Q96RU8 372 aa6.14□□□□□ -1.43
PTPN4-204ENST00000431283 TIMP4Q99727 224 aa6.14□□□□□ -1.43
PTPN4-204ENST00000431283 KMT5AQ9NQR1 393 aa6.14□□□□□ -1.43
PTPN4-204ENST00000431283 CTTNBP2NLQ9P2B4 639 aa6.14□□□□□ -1.43
PTPN4-204ENST00000431283 TRHDEQ9UKU6 1024 aa6.14□□□□□ -1.43
PTPN4-204ENST00000431283 LIMCH1Q9UPQ0 1083 aa6.14□□□□□ -1.43
PTPN4-204ENST00000431283 CFAP20Q9Y6A4 193 aaKnown RBP6.14□□□□□ -1.43
PTPN4-204ENST00000431283 WNT6Q9Y6F9 365 aa6.14□□□□□ -1.43
PTPN4-204ENST00000431283 CFTRP13569 1480 aa6.14□□□□□ -1.43
PTPN4-204ENST00000431283 E7ENX8 843 aa6.13□□□□□ -1.43
PTPN4-204ENST00000431283 SUN1O94901 812 aa6.13□□□□□ -1.43
PTPN4-204ENST00000431283 ABCG1P45844 678 aa6.13□□□□□ -1.43
PTPN4-204ENST00000431283 NPTX2P47972 431 aa6.13□□□□□ -1.43
PTPN4-204ENST00000431283 GUCY2FP51841 1108 aa6.13□□□□□ -1.43
PTPN4-204ENST00000431283 POU6F2P78424 691 aaPredicted RBP6.13□□□□□ -1.43
PTPN4-204ENST00000431283 TAP2Q03519 686 aa6.13□□□□□ -1.43
PTPN4-204ENST00000431283 TLE1Q04724 770 aa6.13□□□□□ -1.43
PTPN4-204ENST00000431283 SRSF4Q08170 494 aaKnown RBP6.13□□□□□ -1.43
PTPN4-204ENST00000431283 INAVAQ3KP66 663 aa6.13□□□□□ -1.43
PTPN4-204ENST00000431283 C3orf36Q3SXR2 165 aa6.13□□□□□ -1.43
PTPN4-204ENST00000431283 CBARPQ8N350 705 aaPredicted RBP6.13□□□□□ -1.43
PTPN4-204ENST00000431283 TMIEQ8NEW7 156 aa6.13□□□□□ -1.43
PTPN4-204ENST00000431283 KAT5Q92993 513 aa6.13□□□□□ -1.43
PTPN4-204ENST00000431283 SARAFQ96BY9 339 aa6.13□□□□□ -1.43
PTPN4-204ENST00000431283 HAPLN3Q96S86 360 aa6.13□□□□□ -1.43
PTPN4-204ENST00000431283 SLC29A3Q9BZD2 475 aa6.13□□□□□ -1.43
PTPN4-204ENST00000431283 BRD9Q9H8M2 597 aa6.13□□□□□ -1.43
PTPN4-204ENST00000431283 SLC45A2Q9UMX9 530 aa6.13□□□□□ -1.43
PTPN4-204ENST00000431283 IPPQ9Y573 584 aa6.13□□□□□ -1.43
PTPN4-204ENST00000431283 F5H697 171 aa6.12□□□□□ -1.43
PTPN4-204ENST00000431283 GCOM1H8Y6P7 765 aaPredicted RBP6.12□□□□□ -1.43
PTPN4-204ENST00000431283 POLRMTO00411 1230 aaKnown RBP6.12□□□□□ -1.43
PTPN4-204ENST00000431283 TRIAP1O43715 76 aa6.12□□□□□ -1.43
PTPN4-204ENST00000431283 PPP3CBP16298 524 aa6.12□□□□□ -1.43
PTPN4-204ENST00000431283 WT1P19544 449 aaPredicted RBP6.12□□□□□ -1.43
PTPN4-204ENST00000431283 CCND1P24385 295 aa6.12□□□□□ -1.43
PTPN4-204ENST00000431283 MC2RQ01718 297 aa6.12□□□□□ -1.43
PTPN4-204ENST00000431283 EXOSC10Q01780 885 aaKnown RBP6.12□□□□□ -1.43
PTPN4-204ENST00000431283 FLYWCH1Q4VC44 716 aa6.12□□□□□ -1.43
PTPN4-204ENST00000431283 ZNF788Q6ZQV5 615 aa6.12□□□□□ -1.43
PTPN4-204ENST00000431283 SRRM1Q8IYB3 904 aaKnown RBP6.12□□□□□ -1.43
PTPN4-204ENST00000431283 SCAMP4Q969E2 229 aa6.12□□□□□ -1.43
PTPN4-204ENST00000431283 MRGPRX4Q96LA9 322 aa6.12□□□□□ -1.43
PTPN4-204ENST00000431283 TEKT5Q96M29 485 aa6.12□□□□□ -1.43
PTPN4-204ENST00000431283 TPSD1Q9BZJ3 242 aa6.12□□□□□ -1.43
PTPN4-204ENST00000431283 SIK2Q9H0K1 926 aa6.12□□□□□ -1.43
PTPN4-204ENST00000431283 CFAP97Q9P2B7 532 aa6.12□□□□□ -1.43
PTPN4-204ENST00000431283 COL11A2P13942 1736 aaPredicted RBP6.11□□□□□ -1.43
PTPN4-204ENST00000431283 WIZO95785 1651 aa6.11□□□□□ -1.43
PTPN4-204ENST00000431283 A0A0B4J269 797 aa6.11□□□□□ -1.43
PTPN4-204ENST00000431283 ADM5C9JUS6 153 aa6.11□□□□□ -1.43
PTPN4-204ENST00000431283 URI1O94763 535 aaPredicted RBP6.11□□□□□ -1.43
PTPN4-204ENST00000431283 TTLL1O95922 423 aa6.11□□□□□ -1.43
PTPN4-204ENST00000431283 CYP2C19P33261 490 aa6.11□□□□□ -1.43
PTPN4-204ENST00000431283 TUBB3Q13509 450 aa6.11□□□□□ -1.43
PTPN4-204ENST00000431283 TXNRD1Q16881 649 aa6.11□□□□□ -1.43
PTPN4-204ENST00000431283 CCDC93Q567U6 631 aa6.11□□□□□ -1.43
PTPN4-204ENST00000431283 EPHA10Q5JZY3 1008 aa6.11□□□□□ -1.43
PTPN4-204ENST00000431283 LRCH2Q5VUJ6 765 aa6.11□□□□□ -1.43
PTPN4-204ENST00000431283 KIAA1614Q5VZ46 1190 aa6.11□□□□□ -1.43
PTPN4-204ENST00000431283 SLC30A10Q6XR72 485 aa6.11□□□□□ -1.43
PTPN4-204ENST00000431283 COA7Q96BR5 231 aa6.11□□□□□ -1.43
PTPN4-204ENST00000431283 VRK1Q99986 396 aaPredicted RBP6.11□□□□□ -1.43
PTPN4-204ENST00000431283 KLC4Q9NSK0 619 aa6.11□□□□□ -1.43
PTPN4-204ENST00000431283 SIDT1Q9NXL6 827 aaKnown RBP6.11□□□□□ -1.43
PTPN4-204ENST00000431283 ST3GAL5Q9UNP4 418 aa6.11□□□□□ -1.43
PTPN4-204ENST00000431283 PCDHB1Q9Y5F3 818 aa6.11□□□□□ -1.43
PTPN4-204ENST00000431283 RSF1Q96T23 1441 aaPredicted RBP6.1□□□□□ -1.43
PTPN4-204ENST00000431283 LINC00473A8K010 186 aa6.1□□□□□ -1.43
PTPN4-204ENST00000431283 INO80B-WBP1J3KQ70 363 aa6.1□□□□□ -1.43
PTPN4-204ENST00000431283 CDK11BP21127 795 aaKnown RBP6.1□□□□□ -1.43
PTPN4-204ENST00000431283 MALP21145 153 aa6.1□□□□□ -1.43
PTPN4-204ENST00000431283 PSMC1P62191 440 aaKnown RBP6.1□□□□□ -1.43
PTPN4-204ENST00000431283 KRT85P78386 507 aa6.1□□□□□ -1.43
PTPN4-204ENST00000431283 HNRNPA0Q13151 305 aaKnown RBP6.1□□□□□ -1.43
PTPN4-204ENST00000431283 KHDC1Q4VXA5 237 aaKnown RBP6.1□□□□□ -1.43
PTPN4-204ENST00000431283 PLAC9Q5JTB6 97 aa6.1□□□□□ -1.43
PTPN4-204ENST00000431283 SLC4A10Q6U841 1118 aa6.1□□□□□ -1.43
PTPN4-204ENST00000431283 AMIGO2Q86SJ2 522 aa6.1□□□□□ -1.43
PTPN4-204ENST00000431283 PDSS2Q86YH6 399 aa6.1□□□□□ -1.43
PTPN4-204ENST00000431283 MIER2Q8N344 545 aa6.1□□□□□ -1.43
PTPN4-204ENST00000431283 HASPINQ8TF76 798 aa6.1□□□□□ -1.43
PTPN4-204ENST00000431283 SMG7Q92540 1137 aaKnown RBP6.1□□□□□ -1.43
PTPN4-204ENST00000431283 ALG8Q9BVK2 526 aa6.1□□□□□ -1.43
PTPN4-204ENST00000431283 INO80BQ9C086 356 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms