RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 PCYOX1Q9UHG3 505 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 PNMA3Q9UL41 463 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 DISP2A7MBM2 1401 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 ROBO3Q96MS0 1386 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 TCRBV7S2A1N4TA0A589 114 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 DDX3YO15523 660 aaKnown RBP13.3□□□□□ -0.28
CPNE4-201ENST00000429747 SNHG28P0DPA3 235 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 CHKAP35790 457 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 GARSP41250 739 aaKnown RBP13.3□□□□□ -0.28
CPNE4-201ENST00000429747 GPC3P51654 580 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 DRG2P55039 364 aaKnown RBP13.3□□□□□ -0.28
CPNE4-201ENST00000429747 ASPHQ12797 758 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 CUL2Q13617 745 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 CCNG2Q16589 344 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 XKR3Q5GH77 459 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 PARD3BQ8TEW8 1205 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 ANKEF1Q9NU02 776 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 MYH8P13535 1937 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 NVLO15381 856 aaKnown RBP13.3□□□□□ -0.28
CPNE4-201ENST00000429747 PSMD10O75832 226 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 CTCFP49711 727 aaPredicted RBP13.3□□□□□ -0.28
CPNE4-201ENST00000429747 ALDH18A1P54886 795 aaKnown RBP13.3□□□□□ -0.28
CPNE4-201ENST00000429747 SLC12A2P55011 1212 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 MAP7Q14244 749 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 LRRC36Q1X8D7 754 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 ZNF677Q86XU0 584 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 FAM71DQ8N9W8 422 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 ACAP3Q96P50 834 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 RANBP17Q9H2T7 1088 aaKnown RBP13.3□□□□□ -0.28
CPNE4-201ENST00000429747 HEY2Q9UBP5 337 aa13.3□□□□□ -0.28
CPNE4-201ENST00000429747 APOBEC2Q9Y235 224 aaKnown RBP13.3□□□□□ -0.28
CPNE4-201ENST00000429747 MMP13P45452 471 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 TTLL6Q8N841 843 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 SPIRE2Q8WWL2 714 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 PSPC1Q8WXF1 523 aaKnown RBP13.29□□□□□ -0.28
CPNE4-201ENST00000429747 FAM111AQ96PZ2 611 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 MANSC1Q9H8J5 431 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 SLC38A10Q9HBR0 1119 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 COG5Q9UP83 839 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 C15orf41Q9Y2V0 281 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 TMX2Q9Y320 296 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 FOXO6A8MYZ6 492 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 EXTL3O43909 919 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 VCAM1P19320 739 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 MUTP22033 750 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 PAX7P23759 505 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 ARL4AP40617 200 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 GEMIN4P57678 1058 aaKnown RBP13.29□□□□□ -0.28
CPNE4-201ENST00000429747 SNRPFP62306 86 aaKnown RBP13.29□□□□□ -0.28
CPNE4-201ENST00000429747 GABPAQ06546 454 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 CYP24A1Q07973 514 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 PIGHQ14442 188 aaPredicted RBP13.29□□□□□ -0.28
CPNE4-201ENST00000429747 EMC2Q15006 297 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 BMT2Q1RMZ1 405 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 SPDYCQ5MJ68 293 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 TMEM154Q6P9G4 183 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 MTDHQ86UE4 582 aaKnown RBP13.29□□□□□ -0.28
CPNE4-201ENST00000429747 RNF149Q8NC42 400 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 SPATA18Q8TC71 538 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 VPS11Q9H270 941 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 TRIM33Q9UPN9 1127 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 B2RBV5 119 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 ANKRD63C9JTQ0 380 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 PSTPIP1O43586 416 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 GRAP2O75791 330 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 MAP3K6O95382 1288 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 ZSCAN5DPP0CG00 497 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 ZNF200P98182 395 aaPredicted RBP13.29□□□□□ -0.28
CPNE4-201ENST00000429747 CIAPIN1Q6FI81 312 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 CDR2LQ86X02 465 aaPredicted RBP13.29□□□□□ -0.28
CPNE4-201ENST00000429747 WRNIP1Q96S55 665 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 MRPL4Q9BYD3 311 aaKnown RBP13.29□□□□□ -0.28
CPNE4-201ENST00000429747 NDE1Q9NXR1 346 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 DLGAP2Q9P1A6 1054 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 AFF2P51816 1311 aa13.29□□□□□ -0.28
CPNE4-201ENST00000429747 KCNN4O15554 427 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 PKN2Q16513 984 aaKnown RBP13.28□□□□□ -0.28
CPNE4-201ENST00000429747 TAF1BQ53T94 588 aaPredicted RBP13.28□□□□□ -0.28
CPNE4-201ENST00000429747 RGS9BPQ6ZS82 235 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 MIPOL1Q8TD10 442 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 C5P01031 1676 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 CBX6O95503 412 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 ICAM1P05362 532 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 PECAM1P16284 738 aaPredicted RBP13.28□□□□□ -0.28
CPNE4-201ENST00000429747 FAXCQ5TGI0 409 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 THTPAQ9BU02 230 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 SLC12A6Q9UHW9 1150 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 WDR46O15213 610 aaKnown RBP13.28□□□□□ -0.28
CPNE4-201ENST00000429747 TRPA1O75762 1119 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 ADRB2P07550 413 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 HMGCS2P54868 508 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 SLC26A7Q8TE54 656 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 CKAP2Q8WWK9 683 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 PIK3R5Q8WYR1 880 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 MKL1Q969V6 931 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 ALKBH8Q96BT7 664 aaKnown RBP13.28□□□□□ -0.28
CPNE4-201ENST00000429747 CYP26B1Q9NR63 512 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 ZC3H7BQ9UGR2 993 aaKnown RBP13.28□□□□□ -0.28
CPNE4-201ENST00000429747 FIS1Q9Y3D6 152 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 H3BRJ5 948 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms